Wall clock time and date at job start Sun Mar 7 2021 02:52:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45196 * 109.47488 * 2 1 4 4 C 1.34226 * 117.00411 * 180.02562 * 3 2 1 5 5 O 1.20821 * 120.00050 * 359.97438 * 4 3 2 6 6 C 1.50701 * 120.00189 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.85232 * 311.19866 * 6 4 3 8 8 C 1.53784 * 113.61272 * 82.49841 * 6 4 3 9 9 C 1.53789 * 87.07776 * 139.98270 * 8 6 4 10 10 F 1.39901 * 113.68767 * 89.12973 * 9 8 6 11 11 C 1.53001 * 113.61152 * 220.01895 * 9 8 6 12 12 N 1.46493 * 109.47084 * 277.49624 * 11 9 8 13 13 C 1.34784 * 119.99864 * 180.02562 * 12 11 9 14 14 O 1.21283 * 119.99649 * 359.72839 * 13 12 11 15 15 C 1.50694 * 119.99988 * 179.72721 * 13 12 11 16 16 O 1.42905 * 109.47179 * 179.97438 * 15 13 12 17 17 C 1.35898 * 117.00276 * 179.97438 * 16 15 13 18 18 C 1.38707 * 120.05801 * 180.02562 * 17 16 15 19 19 C 1.38167 * 119.94550 * 180.02562 * 18 17 16 20 20 C 1.50701 * 119.97179 * 180.02562 * 19 18 17 21 21 O 1.42901 * 109.47297 * 64.99375 * 20 19 18 22 22 Si 1.86301 * 109.46881 * 184.99761 * 20 19 18 23 23 C 1.38245 * 120.05425 * 359.97438 * 19 18 17 24 24 C 1.38286 * 120.11271 * 359.97438 * 23 19 18 25 25 C 1.38127 * 120.05627 * 359.76005 * 24 23 19 26 26 C 1.53777 * 87.08200 * 334.56911 * 9 8 6 27 27 H 1.08991 * 109.47398 * 59.99946 * 1 2 3 28 28 H 1.09004 * 109.47271 * 180.02562 * 1 2 3 29 29 H 1.09005 * 109.46713 * 299.99733 * 1 2 3 30 30 H 1.09004 * 109.46994 * 239.99352 * 2 1 3 31 31 H 1.09004 * 109.47142 * 119.99883 * 2 1 3 32 32 H 1.08996 * 113.61267 * 25.43862 * 8 6 4 33 33 H 1.08990 * 113.61876 * 254.53155 * 8 6 4 34 34 H 1.09007 * 109.46593 * 157.49881 * 11 9 8 35 35 H 1.09006 * 109.47216 * 37.50340 * 11 9 8 36 36 H 0.97000 * 120.00740 * 359.72857 * 12 11 9 37 37 H 1.08998 * 109.47224 * 299.99701 * 15 13 12 38 38 H 1.09002 * 109.47054 * 60.00213 * 15 13 12 39 39 H 1.08006 * 120.02633 * 0.02562 * 18 17 16 40 40 H 1.08997 * 109.46925 * 304.99648 * 20 19 18 41 41 H 0.96705 * 113.99585 * 59.99817 * 21 20 19 42 42 H 1.48504 * 109.99654 * 179.97438 * 22 20 19 43 43 H 1.48502 * 109.99897 * 301.31631 * 22 20 19 44 44 H 1.08003 * 119.94146 * 180.02562 * 23 19 18 45 45 H 1.08002 * 119.97200 * 180.02562 * 24 23 19 46 46 H 1.07997 * 120.02800 * 180.27662 * 25 24 23 47 47 H 1.08996 * 113.61589 * 139.97696 * 26 9 8 48 48 H 1.09004 * 113.61479 * 270.88362 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9208 2.9373 -0.0012 7 1 3.4709 3.5812 -0.7570 8 6 3.9868 3.5773 1.3957 9 6 5.3569 4.1427 0.9856 10 9 5.2852 5.3935 0.3630 11 6 6.3994 4.0947 2.1044 12 7 6.2213 5.2498 2.9877 13 6 7.0334 5.4172 4.0502 14 8 7.9085 4.6089 4.2778 15 6 6.8542 6.6087 4.9553 16 8 7.8271 6.5633 6.0010 17 6 7.8033 7.5730 6.9103 18 6 8.7195 7.5920 7.9514 19 6 8.6929 8.6194 8.8749 20 6 9.6885 8.6410 10.0060 21 8 11.0060 8.8065 9.4779 22 14 9.2962 10.0569 11.1515 23 6 7.7544 9.6281 8.7615 24 6 6.8405 9.6120 7.7237 25 6 6.8665 8.5900 6.7948 26 6 5.4583 2.9681 -0.0017 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3634 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8901 30 1 1.8933 -0.5140 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 4.0392 2.8509 2.2066 33 1 3.2298 4.3438 1.5610 34 1 7.3991 4.1197 1.6707 35 1 6.2750 3.1761 2.6779 36 1 5.5216 5.8965 2.8054 37 1 6.9821 7.5251 4.3792 38 1 5.8543 6.5885 5.3887 39 1 9.4532 6.8044 8.0402 40 1 9.6331 7.7021 10.5567 41 1 11.1282 9.6230 8.9745 42 1 10.2706 10.0888 12.2717 43 1 9.3372 11.3402 10.4053 44 1 7.7354 10.4306 9.4841 45 1 6.1085 10.4014 7.6371 46 1 6.1554 8.5803 5.9820 47 1 5.8891 3.2428 -0.9644 48 1 5.9130 2.0751 0.4273 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15509216_4860298.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:52:23 Heat of formation + Delta-G solvation = -177.737236 kcal Electronic energy + Delta-G solvation = -31971.839048 eV Core-core repulsion = 27102.675042 eV Total energy + Delta-G solvation = -4869.164007 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.156 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -48.94904 -41.85964 -41.56114 -40.64029 -39.31018 -38.93872 -37.57962 -37.34619 -35.79648 -32.71933 -32.49819 -31.88136 -30.61841 -28.70002 -27.16582 -26.85709 -26.09161 -23.82569 -23.68393 -22.64754 -22.05842 -21.63211 -20.68973 -19.36265 -19.22842 -18.60472 -18.03692 -17.75972 -17.57122 -17.49088 -17.34116 -17.16177 -16.97987 -16.66378 -16.21927 -16.09814 -15.86211 -15.71464 -15.43137 -15.23034 -14.89541 -14.70849 -14.59676 -14.46039 -14.14428 -14.08579 -13.97257 -13.67330 -13.60600 -13.38557 -13.01123 -12.99890 -12.92932 -12.62290 -12.60255 -12.50501 -12.11459 -12.01874 -11.92821 -11.60637 -11.59083 -11.55637 -11.40748 -11.08245 -10.66279 -10.36765 -9.94166 -9.28894 -4.90504 0.20831 0.39457 1.00490 1.26342 1.35754 1.40080 1.58960 1.61741 1.96862 2.49606 2.66638 2.84290 2.96908 3.11715 3.25261 3.38569 3.41347 3.51570 3.66721 3.83598 3.84470 3.95467 3.99881 4.02299 4.04672 4.13213 4.14996 4.25038 4.26905 4.30499 4.36364 4.47119 4.53149 4.54156 4.54759 4.65822 4.73901 4.79436 4.81755 4.88360 4.98619 5.06695 5.11893 5.18640 5.24785 5.37408 5.40068 5.45395 5.69165 6.20898 6.38479 6.46358 6.60368 7.00440 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.358 6.358 4 C 0.472 3.528 5 O -0.537 6.537 6 C -0.107 4.107 7 H 0.151 0.849 8 C -0.126 4.126 9 C 0.095 3.905 10 F -0.183 7.183 11 C 0.113 3.887 12 N -0.708 5.708 13 C 0.515 3.485 14 O -0.571 6.571 15 C 0.039 3.961 16 O -0.323 6.323 17 C 0.113 3.887 18 C -0.149 4.149 19 C -0.081 4.081 20 C -0.095 4.095 21 O -0.551 6.551 22 Si 0.786 3.214 23 C -0.158 4.158 24 C -0.070 4.070 25 C -0.201 4.201 26 C -0.133 4.133 27 H 0.069 0.931 28 H 0.095 0.905 29 H 0.070 0.930 30 H 0.067 0.933 31 H 0.068 0.932 32 H 0.110 0.890 33 H 0.120 0.880 34 H 0.075 0.925 35 H 0.092 0.908 36 H 0.422 0.578 37 H 0.125 0.875 38 H 0.130 0.870 39 H 0.112 0.888 40 H 0.118 0.882 41 H 0.386 0.614 42 H -0.305 1.305 43 H -0.275 1.275 44 H 0.148 0.852 45 H 0.163 0.837 46 H 0.161 0.839 47 H 0.103 0.897 48 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.983 5.145 -1.344 12.203 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.317 3.683 5 O -0.426 6.426 6 C -0.126 4.126 7 H 0.168 0.832 8 C -0.163 4.163 9 C 0.076 3.924 10 F -0.164 7.164 11 C -0.011 4.011 12 N -0.363 5.363 13 C 0.301 3.699 14 O -0.449 6.449 15 C -0.039 4.039 16 O -0.237 6.237 17 C 0.068 3.932 18 C -0.168 4.168 19 C -0.082 4.082 20 C -0.203 4.203 21 O -0.360 6.360 22 Si 0.690 3.310 23 C -0.176 4.176 24 C -0.088 4.088 25 C -0.219 4.219 26 C -0.171 4.171 27 H 0.088 0.912 28 H 0.113 0.887 29 H 0.089 0.911 30 H 0.085 0.915 31 H 0.087 0.913 32 H 0.129 0.871 33 H 0.138 0.862 34 H 0.093 0.907 35 H 0.110 0.890 36 H 0.260 0.740 37 H 0.142 0.858 38 H 0.148 0.852 39 H 0.130 0.870 40 H 0.136 0.864 41 H 0.235 0.765 42 H -0.234 1.234 43 H -0.201 1.201 44 H 0.165 0.835 45 H 0.180 0.820 46 H 0.179 0.821 47 H 0.122 0.878 48 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -9.693 4.267 -0.588 10.607 hybrid contribution 0.911 -0.107 -1.329 1.615 sum -8.782 4.160 -1.917 9.905 Atomic orbital electron populations 1.21827 0.90677 1.04252 1.03809 1.23264 0.96942 0.79296 1.02508 1.86520 1.24149 1.33496 1.83336 1.23870 0.80609 0.92714 0.71135 1.90687 1.61162 1.44153 1.46629 1.22619 0.96854 0.90392 1.02719 0.83166 1.23619 0.96309 1.01316 0.95066 1.21801 0.97123 0.80626 0.92802 1.92902 1.97158 1.42607 1.83705 1.21791 0.99075 0.90228 0.89983 1.45492 1.36094 1.28019 1.26723 1.20550 0.81003 0.86784 0.81535 1.90784 1.34799 1.46348 1.72970 1.22710 0.94507 0.97881 0.88806 1.86119 1.54813 1.45312 1.37434 1.19192 0.96021 0.88225 0.89723 1.20307 1.00210 1.00891 0.95397 1.20115 0.97275 0.94469 0.96334 1.25471 0.82360 1.13334 0.99104 1.86587 1.29506 1.46582 1.73275 0.93846 0.87511 0.73642 0.75992 1.21253 0.96731 0.99121 1.00487 1.21332 0.97623 0.97631 0.92216 1.21645 1.01060 0.95605 1.03638 1.23596 0.93889 0.98197 1.01423 0.91241 0.88665 0.91098 0.91484 0.91315 0.87133 0.86164 0.90697 0.88999 0.73979 0.85752 0.85220 0.87025 0.86391 0.76454 1.23408 1.20090 0.83504 0.81981 0.82107 0.87836 0.87067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.73 10.29 71.98 0.74 1.48 16 2 C 0.05 -0.03 6.19 71.98 0.45 0.42 16 3 O -0.36 -0.48 10.22 -51.38 -0.53 -1.00 16 4 C 0.47 0.86 7.48 71.24 0.53 1.39 16 5 O -0.54 -4.52 15.65 21.98 0.34 -4.18 16 6 C -0.11 0.53 4.24 -11.01 -0.05 0.48 16 7 H 0.15 -1.22 8.14 -2.39 -0.02 -1.24 16 8 C -0.13 1.04 7.08 31.12 0.22 1.26 16 9 C 0.10 -0.58 1.67 -10.27 -0.02 -0.60 16 10 F -0.18 0.75 16.79 44.97 0.76 1.51 16 11 C 0.11 -0.34 5.37 86.38 0.46 0.12 16 12 N -0.71 3.20 5.47 -463.05 -2.53 0.67 16 13 C 0.51 1.30 7.91 87.65 0.69 1.99 16 14 O -0.57 -8.26 16.50 16.00 0.26 -7.99 16 15 C 0.04 -0.12 5.22 71.23 0.37 0.25 16 16 O -0.32 -2.17 9.67 -73.37 -0.71 -2.88 16 17 C 0.11 0.46 6.69 22.51 0.15 0.61 16 18 C -0.15 -0.96 9.62 22.37 0.22 -0.74 16 19 C -0.08 -0.17 5.35 -19.88 -0.11 -0.28 16 20 C -0.10 -0.16 2.80 71.24 0.20 0.04 16 21 O -0.55 -3.07 12.83 -148.98 -1.91 -4.98 16 22 Si 0.79 -1.57 29.88 68.60 2.05 0.48 16 23 C -0.16 0.36 8.67 22.28 0.19 0.55 16 24 C -0.07 0.32 10.04 22.25 0.22 0.55 16 25 C -0.20 0.61 9.04 22.37 0.20 0.82 16 26 C -0.13 0.59 6.86 31.12 0.21 0.80 16 27 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 28 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 29 H 0.07 -0.37 8.14 -2.38 -0.02 -0.39 16 30 H 0.07 0.02 8.13 -2.39 -0.02 0.00 16 31 H 0.07 -0.01 8.13 -2.38 -0.02 -0.03 16 32 H 0.11 -0.88 7.91 -2.39 -0.02 -0.90 16 33 H 0.12 -1.42 8.14 -2.39 -0.02 -1.44 16 34 H 0.07 -0.01 8.14 -2.38 -0.02 -0.03 16 35 H 0.09 -0.19 7.94 -2.38 -0.02 -0.21 16 36 H 0.42 -4.69 8.18 -92.71 -0.76 -5.45 16 37 H 0.12 -1.16 7.65 -2.39 -0.02 -1.18 16 38 H 0.13 -1.34 7.68 -2.39 -0.02 -1.36 16 39 H 0.11 1.10 8.06 -2.91 -0.02 1.08 16 40 H 0.12 0.14 7.96 -2.39 -0.02 0.12 16 41 H 0.39 -0.25 8.70 -74.05 -0.64 -0.90 16 42 H -0.31 -1.86 7.11 99.48 0.71 -1.15 16 43 H -0.27 -0.11 7.01 99.48 0.70 0.58 16 44 H 0.15 -0.94 4.83 -2.91 -0.01 -0.95 16 45 H 0.16 -1.75 8.06 -2.91 -0.02 -1.77 16 46 H 0.16 -1.63 6.30 -2.91 -0.02 -1.65 16 47 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 48 H 0.11 -0.24 7.39 -2.39 -0.02 -0.26 16 Total: 0.00 -30.08 409.56 2.07 -28.01 By element: Atomic # 1 Polarization: -18.41 SS G_CDS: -0.36 Total: -18.77 kcal Atomic # 6 Polarization: 4.44 SS G_CDS: 4.69 Total: 9.13 kcal Atomic # 7 Polarization: 3.20 SS G_CDS: -2.53 Total: 0.67 kcal Atomic # 8 Polarization: -18.50 SS G_CDS: -2.54 Total: -21.04 kcal Atomic # 9 Polarization: 0.75 SS G_CDS: 0.76 Total: 1.51 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: 2.05 Total: 0.48 kcal Total: -30.08 2.07 -28.01 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15509216_4860298.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.724 kcal (2) G-P(sol) polarization free energy of solvation -30.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.803 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.737 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds