Wall clock time and date at job start Sun Mar 7 2021 02:52:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45197 * 109.47632 * 2 1 4 4 C 1.34230 * 117.00565 * 179.97438 * 3 2 1 5 5 O 1.20823 * 119.99275 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00175 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.84886 * 48.80463 * 6 4 3 8 8 C 1.53776 * 113.61370 * 180.02562 * 6 4 3 9 9 C 1.53784 * 87.08581 * 140.06407 * 8 6 4 10 10 F 1.39896 * 113.61323 * 89.19741 * 9 8 6 11 11 C 1.52999 * 113.61358 * 220.01943 * 9 8 6 12 12 N 1.46504 * 109.46623 * 184.99589 * 11 9 8 13 13 C 1.34775 * 119.99608 * 180.02562 * 12 11 9 14 14 O 1.21280 * 120.00316 * 0.02562 * 13 12 11 15 15 C 1.50700 * 119.99961 * 179.97438 * 13 12 11 16 16 O 1.42895 * 109.47422 * 179.97438 * 15 13 12 17 17 C 1.35996 * 117.00029 * 180.02562 * 16 15 13 18 18 C 1.39155 * 120.07039 * 180.02562 * 17 16 15 19 19 O 1.35999 * 120.07430 * 0.02562 * 18 17 16 20 20 C 1.42897 * 116.99765 * 179.97438 * 19 18 17 21 21 C 1.38563 * 119.85549 * 180.02562 * 18 17 16 22 22 C 1.38242 * 119.99761 * 359.97438 * 21 18 17 23 23 C 1.50700 * 119.92891 * 180.02562 * 22 21 18 24 24 O 1.42901 * 109.46960 * 65.02478 * 23 22 21 25 25 Si 1.86300 * 109.47377 * 185.02319 * 23 22 21 26 26 C 1.38255 * 120.14765 * 0.02645 * 22 21 18 27 27 C 1.38247 * 120.14468 * 359.97438 * 26 22 21 28 28 C 1.53784 * 87.07644 * 334.56701 * 9 8 6 29 29 H 1.08998 * 109.46904 * 300.00440 * 1 2 3 30 30 H 1.08997 * 109.46582 * 59.99794 * 1 2 3 31 31 H 1.08996 * 109.47533 * 179.97438 * 1 2 3 32 32 H 1.08993 * 109.47365 * 239.99609 * 2 1 3 33 33 H 1.09002 * 109.46862 * 119.99825 * 2 1 3 34 34 H 1.09001 * 113.61658 * 25.51193 * 8 6 4 35 35 H 1.09008 * 113.69118 * 254.62343 * 8 6 4 36 36 H 1.09004 * 109.46909 * 64.99925 * 11 9 8 37 37 H 1.08999 * 109.47254 * 304.99707 * 11 9 8 38 38 H 0.97003 * 120.00010 * 359.97438 * 12 11 9 39 39 H 1.09007 * 109.46683 * 60.00017 * 15 13 12 40 40 H 1.08999 * 109.47291 * 300.00186 * 15 13 12 41 41 H 1.09008 * 109.46996 * 180.02562 * 20 19 18 42 42 H 1.08996 * 109.47596 * 299.99815 * 20 19 18 43 43 H 1.09004 * 109.47087 * 60.00573 * 20 19 18 44 44 H 1.07998 * 120.00786 * 180.02562 * 21 18 17 45 45 H 1.08994 * 109.47427 * 305.02472 * 23 22 21 46 46 H 0.96694 * 114.00320 * 60.00300 * 24 23 22 47 47 H 1.48499 * 110.00171 * 180.02562 * 25 23 22 48 48 H 1.48503 * 109.99764 * 301.32123 * 25 23 22 49 49 H 1.07998 * 119.92771 * 179.70078 * 26 22 21 50 50 H 1.07995 * 120.00081 * 179.97438 * 27 26 22 51 51 H 1.08995 * 113.61614 * 139.98293 * 28 9 8 52 52 H 1.09005 * 113.61425 * 270.88607 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3449 1.5448 0.0005 5 8 4.0807 0.5865 0.0015 6 6 3.9209 2.9373 0.0012 7 1 3.4710 3.5811 0.7570 8 6 5.4583 2.9679 0.0011 9 6 5.3567 4.1442 -0.9843 10 9 5.2853 5.3940 -0.3596 11 6 6.3988 4.0980 -2.1035 12 7 6.2983 5.3138 -2.9147 13 6 7.1233 5.4929 -3.9653 14 8 7.9485 4.6475 -4.2394 15 6 7.0196 6.7432 -4.8002 16 8 7.9929 6.7002 -5.8455 17 6 8.0336 7.7611 -6.6953 18 6 8.9564 7.7854 -7.7366 19 8 9.8192 6.7481 -7.9069 20 6 10.7383 6.8411 -8.9972 21 6 8.9942 8.8688 -8.5996 22 6 8.1161 9.9222 -8.4254 23 6 8.1582 11.0995 -9.3653 24 8 7.7892 10.6739 -10.6786 25 14 6.9668 12.4058 -8.7782 26 6 7.1993 9.8981 -7.3909 27 6 7.1563 8.8202 -6.5263 28 6 3.9864 3.5795 -1.3946 29 1 -0.3633 0.5139 0.8899 30 1 -0.3632 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 1.8934 -0.5139 -0.8899 33 1 1.8933 -0.5138 0.8900 34 1 5.9128 2.0757 -0.4295 35 1 5.8910 3.2408 0.9637 36 1 6.2184 3.2259 -2.7320 37 1 7.3962 4.0326 -1.6688 38 1 5.6375 5.9895 -2.6961 39 1 7.2000 7.6156 -4.1719 40 1 6.0220 6.8084 -5.2346 41 1 11.3667 5.9507 -9.0196 42 1 10.1852 6.9186 -9.9332 43 1 11.3640 7.7247 -8.8705 44 1 9.7091 8.8900 -9.4088 45 1 9.1671 11.5113 -9.3869 46 1 6.9010 10.2959 -10.7345 47 1 6.9984 13.5720 -9.6970 48 1 5.5922 11.8475 -8.7140 49 1 6.5181 10.7251 -7.2552 50 1 6.4394 8.8039 -5.7187 51 1 3.2294 4.3463 -1.5584 52 1 4.0385 2.8544 -2.2068 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15509216_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:52:42 Heat of formation + Delta-G solvation = -210.232940 kcal Electronic energy + Delta-G solvation = -36624.354399 eV Core-core repulsion = 31279.561462 eV Total energy + Delta-G solvation = -5344.792937 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.171 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -48.93437 -41.86151 -41.79763 -40.86364 -39.46174 -39.11447 -38.90175 -37.56646 -37.02602 -35.76399 -32.71728 -32.14424 -31.50740 -30.79761 -28.87992 -28.39790 -27.15039 -26.38596 -25.95805 -23.87854 -23.48076 -22.56206 -22.04523 -21.74458 -20.67198 -19.80675 -19.21868 -18.66266 -18.42640 -18.08334 -17.78813 -17.59420 -17.48626 -17.36836 -17.11248 -16.86762 -16.62566 -16.19478 -16.11895 -15.88522 -15.78727 -15.76490 -15.61180 -15.34609 -15.06993 -14.68746 -14.57825 -14.42035 -14.31719 -14.07909 -13.77797 -13.67232 -13.59694 -13.51103 -13.37725 -12.99442 -12.92136 -12.63752 -12.58822 -12.58163 -12.49797 -12.17155 -12.13308 -11.99432 -11.92777 -11.62291 -11.58880 -11.54402 -11.40063 -11.04544 -10.60538 -10.32711 -9.78391 -8.91979 -4.87566 0.17142 0.28383 1.01146 1.34007 1.38910 1.41090 1.59711 1.63789 2.00217 2.31279 2.49921 2.55848 2.85903 2.97438 3.13728 3.26615 3.40528 3.41636 3.54088 3.66548 3.84787 3.86274 3.90970 3.95553 4.02378 4.05166 4.09342 4.14871 4.18162 4.28269 4.29286 4.30597 4.31022 4.36430 4.47939 4.54485 4.56885 4.57699 4.65530 4.66584 4.75146 4.80854 4.82021 4.88291 5.01318 5.08760 5.12030 5.13094 5.21844 5.37612 5.40401 5.59597 5.95786 6.32126 6.49968 6.52795 6.60924 7.05231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.472 3.528 5 O -0.537 6.537 6 C -0.107 4.107 7 H 0.151 0.849 8 C -0.133 4.133 9 C 0.097 3.903 10 F -0.182 7.182 11 C 0.113 3.887 12 N -0.709 5.709 13 C 0.515 3.485 14 O -0.570 6.570 15 C 0.035 3.965 16 O -0.314 6.314 17 C 0.085 3.915 18 C 0.077 3.923 19 O -0.335 6.335 20 C 0.020 3.980 21 C -0.152 4.152 22 C -0.115 4.115 23 C -0.085 4.085 24 O -0.550 6.550 25 Si 0.776 3.224 26 C -0.111 4.111 27 C -0.159 4.159 28 C -0.126 4.126 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.095 0.905 32 H 0.068 0.932 33 H 0.067 0.933 34 H 0.110 0.890 35 H 0.104 0.896 36 H 0.090 0.910 37 H 0.076 0.924 38 H 0.422 0.578 39 H 0.130 0.870 40 H 0.129 0.871 41 H 0.111 0.889 42 H 0.062 0.938 43 H 0.066 0.934 44 H 0.141 0.859 45 H 0.122 0.878 46 H 0.386 0.614 47 H -0.307 1.307 48 H -0.273 1.273 49 H 0.158 0.842 50 H 0.176 0.824 51 H 0.119 0.881 52 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.993 4.982 3.466 9.260 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.317 3.683 5 O -0.426 6.426 6 C -0.126 4.126 7 H 0.169 0.831 8 C -0.171 4.171 9 C 0.078 3.922 10 F -0.162 7.162 11 C -0.011 4.011 12 N -0.364 5.364 13 C 0.301 3.699 14 O -0.448 6.448 15 C -0.043 4.043 16 O -0.228 6.228 17 C 0.040 3.960 18 C 0.032 3.968 19 O -0.249 6.249 20 C -0.074 4.074 21 C -0.171 4.171 22 C -0.116 4.116 23 C -0.193 4.193 24 O -0.359 6.359 25 Si 0.681 3.319 26 C -0.129 4.129 27 C -0.177 4.177 28 C -0.164 4.164 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.113 0.887 32 H 0.087 0.913 33 H 0.085 0.915 34 H 0.129 0.871 35 H 0.122 0.878 36 H 0.109 0.891 37 H 0.094 0.906 38 H 0.260 0.740 39 H 0.147 0.853 40 H 0.147 0.853 41 H 0.129 0.871 42 H 0.080 0.920 43 H 0.085 0.915 44 H 0.159 0.841 45 H 0.139 0.861 46 H 0.235 0.765 47 H -0.236 1.236 48 H -0.199 1.199 49 H 0.175 0.825 50 H 0.193 0.807 51 H 0.138 0.862 52 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -6.188 4.404 3.084 8.197 hybrid contribution -0.301 -0.905 -0.844 1.274 sum -6.488 3.499 2.240 7.704 Atomic orbital electron populations 1.21826 0.90692 1.04245 1.03801 1.23260 0.96932 0.79314 1.02504 1.86520 1.24180 1.33482 1.83346 1.23882 0.80593 0.92738 0.71125 1.90687 1.61170 1.44148 1.46631 1.22616 0.96894 0.90348 1.02721 0.83131 1.23603 0.93825 0.98200 1.01485 1.21788 0.97009 0.80682 0.92732 1.92895 1.97152 1.42613 1.83566 1.21799 0.99341 0.88675 0.91275 1.45490 1.38312 1.23171 1.29429 1.20547 0.80441 0.87922 0.80972 1.90789 1.37484 1.46142 1.70384 1.22760 0.94692 0.97210 0.89608 1.86216 1.56060 1.40207 1.40284 1.18586 0.96913 0.89258 0.91252 1.18669 0.92828 0.89588 0.95759 1.86190 1.46664 1.40813 1.51266 1.23284 0.91711 1.04630 0.87780 1.21021 1.02585 0.93333 1.00119 1.20114 0.96926 0.96603 0.97958 1.25310 1.10028 1.00217 0.83767 1.86571 1.38522 1.82574 1.28204 0.93967 0.76239 0.74546 0.87159 1.21049 0.98773 0.98710 0.94351 1.21379 1.00395 0.92804 1.03170 1.23636 0.96423 1.01272 0.95062 0.91220 0.91137 0.88667 0.91347 0.91457 0.87129 0.87775 0.89149 0.90603 0.73957 0.85288 0.85325 0.87112 0.91964 0.91549 0.84110 0.86060 0.76459 1.23573 1.19945 0.82512 0.80677 0.86234 0.87227 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.70 10.29 71.98 0.74 1.44 16 2 C 0.05 -0.01 6.19 71.98 0.45 0.43 16 3 O -0.36 -0.57 10.22 -51.41 -0.53 -1.09 16 4 C 0.47 0.96 7.49 71.23 0.53 1.50 16 5 O -0.54 -4.63 15.65 21.97 0.34 -4.29 16 6 C -0.11 0.51 4.24 -11.02 -0.05 0.47 16 7 H 0.15 -1.21 8.14 -2.39 -0.02 -1.23 16 8 C -0.13 0.58 6.86 31.12 0.21 0.79 16 9 C 0.10 -0.59 1.74 -10.27 -0.02 -0.61 16 10 F -0.18 0.82 16.58 44.97 0.75 1.56 16 11 C 0.11 -0.32 5.42 86.38 0.47 0.15 16 12 N -0.71 2.98 5.45 -463.05 -2.52 0.46 16 13 C 0.51 1.57 7.91 87.66 0.69 2.26 16 14 O -0.57 -8.71 16.50 16.01 0.26 -8.45 16 15 C 0.03 -0.10 5.22 71.24 0.37 0.27 16 16 O -0.31 -2.55 9.45 -67.09 -0.63 -3.18 16 17 C 0.09 0.44 6.70 22.57 0.15 0.59 16 18 C 0.08 0.60 6.70 22.57 0.15 0.75 16 19 O -0.33 -3.68 10.28 -79.68 -0.82 -4.50 16 20 C 0.02 0.05 9.81 113.37 1.11 1.16 16 21 C -0.15 -0.54 8.67 22.35 0.19 -0.34 16 22 C -0.12 0.02 5.35 -19.86 -0.11 -0.08 16 23 C -0.09 0.13 2.80 71.24 0.20 0.33 16 24 O -0.55 -1.07 12.83 -148.98 -1.91 -2.98 16 25 Si 0.78 -3.25 29.87 68.60 2.05 -1.20 16 26 C -0.11 0.39 8.66 22.28 0.19 0.58 16 27 C -0.16 0.46 9.04 22.35 0.20 0.66 16 28 C -0.13 1.00 7.08 31.12 0.22 1.22 16 29 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 30 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 31 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 32 H 0.07 0.01 8.13 -2.39 -0.02 -0.01 16 33 H 0.07 0.03 8.13 -2.39 -0.02 0.01 16 34 H 0.11 -0.22 7.40 -2.39 -0.02 -0.24 16 35 H 0.10 -0.55 8.14 -2.38 -0.02 -0.57 16 36 H 0.09 -0.16 7.84 -2.38 -0.02 -0.18 16 37 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 38 H 0.42 -4.57 8.03 -92.71 -0.74 -5.31 16 39 H 0.13 -1.27 7.66 -2.38 -0.02 -1.28 16 40 H 0.13 -1.30 7.67 -2.39 -0.02 -1.32 16 41 H 0.11 -0.02 8.14 -2.38 -0.02 -0.04 16 42 H 0.06 0.03 7.66 -2.39 -0.02 0.01 16 43 H 0.07 -0.02 7.66 -2.39 -0.02 -0.04 16 44 H 0.14 0.29 6.30 -2.91 -0.02 0.28 16 45 H 0.12 -0.32 7.96 -2.39 -0.02 -0.34 16 46 H 0.39 -1.43 8.70 -74.06 -0.64 -2.08 16 47 H -0.31 -1.31 7.11 99.48 0.71 -0.60 16 48 H -0.27 0.50 7.01 99.48 0.70 1.20 16 49 H 0.16 -1.37 4.83 -2.91 -0.01 -1.39 16 50 H 0.18 -1.95 6.30 -2.91 -0.02 -1.97 16 51 H 0.12 -1.36 8.14 -2.39 -0.02 -1.38 16 52 H 0.11 -0.82 7.85 -2.38 -0.02 -0.84 16 Total: 0.00 -33.19 438.38 2.33 -30.85 By element: Atomic # 1 Polarization: -18.39 SS G_CDS: -0.38 Total: -18.76 kcal Atomic # 6 Polarization: 5.86 SS G_CDS: 5.72 Total: 11.58 kcal Atomic # 7 Polarization: 2.98 SS G_CDS: -2.52 Total: 0.46 kcal Atomic # 8 Polarization: -21.21 SS G_CDS: -3.28 Total: -24.49 kcal Atomic # 9 Polarization: 0.82 SS G_CDS: 0.75 Total: 1.56 kcal Atomic # 14 Polarization: -3.25 SS G_CDS: 2.05 Total: -1.20 kcal Total: -33.19 2.33 -30.85 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15509216_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -179.378 kcal (2) G-P(sol) polarization free energy of solvation -33.186 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -212.564 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -210.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds