Wall clock time and date at job start Sun Mar 7 2021 02:52:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45198 * 109.47183 * 2 1 4 4 C 1.34228 * 116.99964 * 180.02562 * 3 2 1 5 5 O 1.20824 * 119.99971 * 0.02562 * 4 3 2 6 6 C 1.50704 * 119.99813 * 179.97438 * 4 3 2 7 7 H 1.08989 * 112.90833 * 311.25089 * 6 4 3 8 8 C 1.53782 * 113.61021 * 82.50471 * 6 4 3 9 9 C 1.53786 * 87.08030 * 139.97885 * 8 6 4 10 10 F 1.39900 * 113.69212 * 89.12318 * 9 8 6 11 11 C 1.53000 * 113.61455 * 220.02144 * 9 8 6 12 12 N 1.46510 * 109.46817 * 277.49628 * 11 9 8 13 13 C 1.34775 * 119.99998 * 180.02562 * 12 11 9 14 14 O 1.21284 * 120.00079 * 359.97438 * 13 12 11 15 15 C 1.50699 * 119.99937 * 179.97438 * 13 12 11 16 16 O 1.42898 * 109.47146 * 179.97438 * 15 13 12 17 17 C 1.35911 * 117.00354 * 179.97438 * 16 15 13 18 18 C 1.38792 * 120.06196 * 179.97438 * 17 16 15 19 19 Br 1.89101 * 120.03632 * 0.05259 * 18 17 16 20 20 C 1.38241 * 119.92642 * 180.02562 * 18 17 16 21 21 C 1.38238 * 120.04751 * 0.02562 * 20 18 17 22 22 C 1.50697 * 119.94282 * 179.97438 * 21 20 18 23 23 O 1.42897 * 109.47328 * 245.02052 * 22 21 20 24 24 Si 1.86304 * 109.47056 * 5.02143 * 22 21 20 25 25 C 1.38285 * 120.11971 * 359.97438 * 21 20 18 26 26 C 1.38148 * 120.06801 * 0.02562 * 25 21 20 27 27 C 1.53781 * 113.60856 * 179.97438 * 6 4 3 28 28 H 1.09003 * 109.46769 * 300.00242 * 1 2 3 29 29 H 1.09001 * 109.47392 * 59.99445 * 1 2 3 30 30 H 1.08994 * 109.47027 * 180.02562 * 1 2 3 31 31 H 1.08994 * 109.46686 * 240.00070 * 2 1 3 32 32 H 1.08998 * 109.47207 * 120.00054 * 2 1 3 33 33 H 1.09004 * 113.61731 * 25.43153 * 8 6 4 34 34 H 1.08997 * 113.61302 * 254.52264 * 8 6 4 35 35 H 1.08996 * 109.47611 * 157.49739 * 11 9 8 36 36 H 1.08999 * 109.47393 * 37.49316 * 11 9 8 37 37 H 0.96998 * 119.99832 * 359.97438 * 12 11 9 38 38 H 1.09000 * 109.46736 * 60.00632 * 15 13 12 39 39 H 1.08999 * 109.47271 * 300.00169 * 15 13 12 40 40 H 1.07998 * 119.97527 * 180.02562 * 20 18 17 41 41 H 1.09005 * 109.47404 * 125.02308 * 22 21 20 42 42 H 0.96703 * 114.00132 * 179.97438 * 23 22 21 43 43 H 1.48500 * 109.99917 * 299.99887 * 24 22 21 44 44 H 1.48496 * 109.99798 * 61.31889 * 24 22 21 45 45 H 1.07992 * 119.96568 * 179.72464 * 25 21 20 46 46 H 1.08003 * 120.01953 * 179.97438 * 26 25 21 47 47 H 1.09000 * 113.61271 * 105.47408 * 27 6 4 48 48 H 1.08998 * 113.69545 * 334.58177 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0015 6 6 3.9208 2.9374 -0.0012 7 1 3.4710 3.5822 -0.7560 8 6 3.9868 3.5772 1.3957 9 6 5.3569 4.1427 0.9856 10 9 5.2854 5.3934 0.3630 11 6 6.3995 4.0946 2.1044 12 7 6.2214 5.2497 2.9878 13 6 7.0336 5.4171 4.0503 14 8 7.9116 4.6112 4.2753 15 6 6.8507 6.6055 4.9587 16 8 7.8244 6.5606 6.0036 17 6 7.7976 7.5679 6.9157 18 6 8.7142 7.5869 7.9577 19 35 10.0034 6.2117 8.1095 20 6 8.6842 8.6125 8.8841 21 6 7.7419 9.6179 8.7734 22 6 7.7109 10.7344 9.7849 23 8 6.4886 10.6749 10.5228 24 14 9.1509 10.5542 10.9532 25 6 6.8277 9.6009 7.7360 26 6 6.8534 8.5783 6.8074 27 6 5.4583 2.9680 -0.0011 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0276 0.0005 31 1 1.8933 -0.5138 -0.8900 32 1 1.8934 -0.5138 0.8900 33 1 4.0393 2.8508 2.2067 34 1 3.2299 4.3439 1.5610 35 1 7.3992 4.1196 1.6708 36 1 6.2751 3.1760 2.6778 37 1 5.5194 5.8944 2.8076 38 1 5.8512 6.5806 5.3927 39 1 6.9750 7.5239 4.3849 40 1 9.3973 8.6282 9.6950 41 1 7.7783 11.6930 9.2703 42 1 6.4002 11.3656 11.1938 43 1 9.0705 9.2513 11.6611 44 1 10.4286 10.6463 10.2023 45 1 6.0898 10.3852 7.6544 46 1 6.1387 8.5656 5.9977 47 1 5.8896 3.2426 -0.9637 48 1 5.9141 2.0756 0.4278 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15509216_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:52:47 Heat of formation + Delta-G solvation = -169.850796 kcal Electronic energy + Delta-G solvation = -34192.782311 eV Core-core repulsion = 28984.142283 eV Total energy + Delta-G solvation = -5208.640028 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 446.066 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -48.95396 -41.87711 -41.75371 -40.72977 -39.35475 -39.00156 -37.58686 -37.27174 -35.79932 -33.66635 -32.72728 -32.36172 -31.19700 -30.35698 -28.91095 -27.17525 -26.53711 -26.01222 -24.19598 -23.75035 -22.38136 -22.06562 -21.80319 -20.70365 -19.67043 -19.26496 -18.63603 -18.33403 -17.84451 -17.65800 -17.59116 -17.45928 -17.20626 -16.94269 -16.67209 -16.30701 -16.12685 -15.88756 -15.78576 -15.41715 -15.19616 -14.95541 -14.65169 -14.57737 -14.54745 -14.34697 -14.14062 -13.99370 -13.84753 -13.73969 -13.67807 -13.52909 -13.00885 -12.93957 -12.62082 -12.56052 -12.51646 -12.33062 -12.23167 -12.14570 -11.94236 -11.87878 -11.60215 -11.57830 -11.41788 -11.36998 -11.09972 -10.36978 -10.30847 -10.14056 -9.42122 -5.00687 -0.17462 -0.04635 0.47023 0.99442 1.25248 1.28046 1.35918 1.57041 1.59543 1.95362 2.26553 2.34211 2.83218 2.95203 3.11003 3.23931 3.27785 3.36911 3.44124 3.57518 3.74760 3.80372 3.82756 3.94396 3.96799 3.98470 3.99911 4.01198 4.13966 4.20167 4.26222 4.29431 4.31533 4.46164 4.52494 4.54027 4.59639 4.68085 4.72958 4.78682 4.80786 4.87297 4.92902 5.05950 5.10878 5.17918 5.18965 5.34653 5.39031 5.94706 6.29852 6.59328 6.93074 7.00228 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.358 6.358 4 C 0.472 3.528 5 O -0.537 6.537 6 C -0.107 4.107 7 H 0.151 0.849 8 C -0.126 4.126 9 C 0.096 3.904 10 F -0.183 7.183 11 C 0.114 3.886 12 N -0.708 5.708 13 C 0.515 3.485 14 O -0.566 6.566 15 C 0.032 3.968 16 O -0.304 6.304 17 C 0.151 3.849 18 C -0.142 4.142 19 Br -0.051 7.051 20 C -0.076 4.076 21 C -0.120 4.120 22 C -0.059 4.059 23 O -0.560 6.560 24 Si 0.750 3.250 25 C -0.028 4.028 26 C -0.190 4.190 27 C -0.133 4.133 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.095 0.905 31 H 0.067 0.933 32 H 0.068 0.932 33 H 0.110 0.890 34 H 0.120 0.880 35 H 0.075 0.925 36 H 0.091 0.909 37 H 0.422 0.578 38 H 0.134 0.866 39 H 0.133 0.867 40 H 0.122 0.878 41 H 0.109 0.891 42 H 0.405 0.595 43 H -0.301 1.301 44 H -0.291 1.291 45 H 0.169 0.831 46 H 0.183 0.817 47 H 0.103 0.897 48 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.595 8.864 -1.243 13.122 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.317 3.683 5 O -0.426 6.426 6 C -0.126 4.126 7 H 0.169 0.831 8 C -0.164 4.164 9 C 0.077 3.923 10 F -0.163 7.163 11 C -0.010 4.010 12 N -0.363 5.363 13 C 0.301 3.699 14 O -0.443 6.443 15 C -0.045 4.045 16 O -0.216 6.216 17 C 0.103 3.897 18 C -0.222 4.222 19 Br 0.034 6.966 20 C -0.096 4.096 21 C -0.121 4.121 22 C -0.170 4.170 23 O -0.370 6.370 24 Si 0.658 3.342 25 C -0.047 4.047 26 C -0.209 4.209 27 C -0.171 4.171 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.113 0.887 31 H 0.085 0.915 32 H 0.086 0.914 33 H 0.128 0.872 34 H 0.138 0.862 35 H 0.093 0.907 36 H 0.109 0.891 37 H 0.260 0.740 38 H 0.152 0.848 39 H 0.151 0.849 40 H 0.139 0.861 41 H 0.127 0.873 42 H 0.257 0.743 43 H -0.230 1.230 44 H -0.219 1.219 45 H 0.187 0.813 46 H 0.200 0.800 47 H 0.122 0.878 48 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -7.569 6.349 -1.231 9.956 hybrid contribution -0.228 -0.295 -0.695 0.789 sum -7.798 6.055 -1.926 10.059 Atomic orbital electron populations 1.21828 0.90667 1.04251 1.03813 1.23263 0.96950 0.79301 1.02497 1.86521 1.24154 1.33487 1.83336 1.23879 0.80607 0.92728 0.71130 1.90688 1.61169 1.44158 1.46634 1.22618 0.96849 0.90374 1.02727 0.83125 1.23622 0.96357 1.01315 0.95058 1.21783 0.97082 0.80635 0.92792 1.92902 1.97154 1.42560 1.83696 1.21781 0.99082 0.90183 0.89956 1.45473 1.35983 1.28141 1.26736 1.20441 0.81192 0.86684 0.81553 1.90807 1.34455 1.46191 1.72880 1.22867 0.94354 0.98642 0.88662 1.86232 1.54459 1.44102 1.36830 1.18732 0.94040 0.88502 0.88430 1.21070 1.00983 0.99122 1.01064 1.96745 1.53356 1.48405 1.98056 1.20768 0.99051 0.92849 0.96916 1.19611 0.97393 0.96485 0.98625 1.24463 0.96619 0.98705 0.97206 1.86431 1.37265 1.58743 1.54595 0.94701 0.74388 0.83340 0.81758 1.21329 0.95585 0.97411 0.90332 1.21728 1.00577 0.94668 1.03885 1.23588 0.93877 0.98208 1.01453 0.91118 0.91212 0.88667 0.91468 0.91351 0.87206 0.86151 0.90657 0.89100 0.73962 0.84836 0.84939 0.86105 0.87336 0.74288 1.22974 1.21878 0.81335 0.80019 0.87826 0.87116 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.70 10.29 71.98 0.74 1.44 16 2 C 0.05 -0.01 6.19 71.98 0.45 0.43 16 3 O -0.36 -0.56 10.22 -51.40 -0.53 -1.09 16 4 C 0.47 0.97 7.48 71.24 0.53 1.50 16 5 O -0.54 -4.67 15.65 21.97 0.34 -4.33 16 6 C -0.11 0.51 4.24 -11.01 -0.05 0.47 16 7 H 0.15 -1.21 8.14 -2.39 -0.02 -1.23 16 8 C -0.13 1.03 7.08 31.12 0.22 1.25 16 9 C 0.10 -0.59 1.67 -10.28 -0.02 -0.61 16 10 F -0.18 0.78 16.80 44.97 0.76 1.53 16 11 C 0.11 -0.35 5.36 86.38 0.46 0.11 16 12 N -0.71 3.45 5.47 -463.05 -2.53 0.91 16 13 C 0.52 1.04 7.91 87.66 0.69 1.74 16 14 O -0.57 -7.96 16.50 16.00 0.26 -7.69 16 15 C 0.03 -0.13 5.22 71.24 0.37 0.24 16 16 O -0.30 -1.95 9.00 -73.51 -0.66 -2.61 16 17 C 0.15 0.77 6.68 22.52 0.15 0.92 16 18 C -0.14 -1.36 6.24 22.40 0.14 -1.22 16 19 Br -0.05 -0.64 33.16 -20.37 -0.68 -1.32 16 20 C -0.08 -0.59 8.40 22.27 0.19 -0.40 16 21 C -0.12 -0.30 5.38 -19.85 -0.11 -0.40 16 22 C -0.06 0.18 2.79 71.24 0.20 0.38 16 23 O -0.56 1.96 12.81 -148.98 -1.91 0.05 16 24 Si 0.75 -0.92 29.85 68.60 2.05 1.13 16 25 C -0.03 0.06 9.68 22.26 0.22 0.27 16 26 C -0.19 0.49 9.04 22.36 0.20 0.69 16 27 C -0.13 0.57 6.85 31.11 0.21 0.78 16 28 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 29 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 30 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 31 H 0.07 0.03 8.13 -2.39 -0.02 0.01 16 32 H 0.07 0.01 8.13 -2.39 -0.02 0.00 16 33 H 0.11 -0.85 7.91 -2.39 -0.02 -0.87 16 34 H 0.12 -1.41 8.14 -2.39 -0.02 -1.43 16 35 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 36 H 0.09 -0.18 7.94 -2.39 -0.02 -0.20 16 37 H 0.42 -4.88 8.19 -92.71 -0.76 -5.64 16 38 H 0.13 -1.50 7.66 -2.39 -0.02 -1.52 16 39 H 0.13 -1.45 7.66 -2.39 -0.02 -1.47 16 40 H 0.12 1.08 4.86 -2.91 -0.01 1.07 16 41 H 0.11 -0.95 7.96 -2.38 -0.02 -0.97 16 42 H 0.41 -5.55 8.74 -74.06 -0.65 -6.20 16 43 H -0.30 -2.30 7.05 99.48 0.70 -1.60 16 44 H -0.29 -1.52 7.11 99.48 0.71 -0.81 16 45 H 0.17 -1.34 8.06 -2.91 -0.02 -1.36 16 46 H 0.18 -2.10 6.30 -2.91 -0.02 -2.11 16 47 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 48 H 0.11 -0.22 7.40 -2.39 -0.02 -0.23 16 Total: 0.00 -33.74 430.05 1.37 -32.37 By element: Atomic # 1 Polarization: -26.21 SS G_CDS: -0.34 Total: -26.55 kcal Atomic # 6 Polarization: 2.99 SS G_CDS: 4.60 Total: 7.59 kcal Atomic # 7 Polarization: 3.45 SS G_CDS: -2.53 Total: 0.91 kcal Atomic # 8 Polarization: -13.18 SS G_CDS: -2.49 Total: -15.67 kcal Atomic # 9 Polarization: 0.78 SS G_CDS: 0.76 Total: 1.53 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: 2.05 Total: 1.13 kcal Atomic # 35 Polarization: -0.64 SS G_CDS: -0.68 Total: -1.32 kcal Total: -33.74 1.37 -32.37 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15509216_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.485 kcal (2) G-P(sol) polarization free energy of solvation -33.738 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -171.222 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.366 kcal (6) G-S(sol) free energy of system = (1) + (5) -169.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds