Wall clock time and date at job start Sun Mar 7 2021 02:53:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45199 * 109.47197 * 2 1 4 4 C 1.34227 * 117.00530 * 179.97438 * 3 2 1 5 5 O 1.20829 * 119.99669 * 0.02562 * 4 3 2 6 6 C 1.50702 * 120.00231 * 179.97438 * 4 3 2 7 7 H 1.08995 * 112.90814 * 48.75288 * 6 4 3 8 8 C 1.53777 * 113.61262 * 180.02562 * 6 4 3 9 9 C 1.53781 * 87.08184 * 139.98125 * 8 6 4 10 10 F 1.39905 * 113.61209 * 89.11429 * 9 8 6 11 11 C 1.52995 * 113.61577 * 219.93336 * 9 8 6 12 12 N 1.46500 * 109.47108 * 183.46965 * 11 9 8 13 13 C 1.34783 * 120.00119 * 179.97438 * 12 11 9 14 14 O 1.21281 * 119.99624 * 0.02562 * 13 12 11 15 15 C 1.50697 * 120.00012 * 179.97438 * 13 12 11 16 16 N 1.46496 * 109.47286 * 180.02562 * 15 13 12 17 17 C 1.36840 * 125.06216 * 264.70427 * 16 15 13 18 18 C 1.34242 * 109.93437 * 179.80993 * 17 16 15 19 19 C 1.50697 * 126.49755 * 180.16187 * 18 17 16 20 20 O 1.42905 * 109.46993 * 105.31771 * 19 18 17 21 21 Si 1.86299 * 109.47208 * 345.31821 * 19 18 17 22 22 C 1.46492 * 106.99997 * 0.43313 * 18 17 16 23 23 C 1.39587 * 134.03121 * 179.76425 * 22 18 17 24 24 C 1.36665 * 119.76141 * 179.97438 * 23 22 18 25 25 C 1.38791 * 120.52715 * 359.97438 * 24 23 22 26 26 C 1.37792 * 120.66608 * 0.02562 * 25 24 23 27 27 C 1.37688 * 125.06418 * 84.99681 * 16 15 13 28 28 C 1.53779 * 113.61502 * 277.50138 * 6 4 3 29 29 H 1.09002 * 109.47140 * 60.00742 * 1 2 3 30 30 H 1.09003 * 109.46976 * 180.02562 * 1 2 3 31 31 H 1.08996 * 109.47671 * 300.00095 * 1 2 3 32 32 H 1.08996 * 109.47671 * 239.99905 * 2 1 3 33 33 H 1.09002 * 109.47140 * 119.99258 * 2 1 3 34 34 H 1.09009 * 113.61922 * 25.43580 * 8 6 4 35 35 H 1.09003 * 113.61452 * 254.52986 * 8 6 4 36 36 H 1.09005 * 109.47501 * 303.46961 * 11 9 8 37 37 H 1.09004 * 109.47494 * 63.46973 * 11 9 8 38 38 H 0.96997 * 120.00462 * 0.02562 * 12 11 9 39 39 H 1.08996 * 109.47196 * 300.00393 * 15 13 12 40 40 H 1.09005 * 109.46904 * 60.00507 * 15 13 12 41 41 H 1.07990 * 125.03250 * 359.95312 * 17 16 15 42 42 H 1.09003 * 109.47267 * 225.31567 * 19 18 17 43 43 H 0.96694 * 114.00034 * 300.00217 * 20 19 18 44 44 H 1.48500 * 110.00186 * 58.68111 * 21 19 18 45 45 H 1.48498 * 109.99951 * 179.97438 * 21 19 18 46 46 H 1.07998 * 120.11800 * 359.97438 * 23 22 18 47 47 H 1.08000 * 119.73680 * 179.97438 * 24 23 22 48 48 H 1.08000 * 119.66405 * 180.02562 * 25 24 23 49 49 H 1.07998 * 120.10385 * 179.97438 * 26 25 24 50 50 H 1.08997 * 113.61925 * 105.47211 * 28 6 4 51 51 H 1.09005 * 113.61759 * 334.56358 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3446 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5830 0.7543 8 6 5.4580 2.9682 0.0001 9 6 5.3564 4.1422 -0.9880 10 9 5.2830 5.3933 -0.3662 11 6 6.3999 4.0946 -2.1058 12 7 6.2750 5.2912 -2.9417 13 6 7.0976 5.4664 -3.9950 14 8 7.9407 4.6330 -4.2511 15 6 6.9687 6.6970 -4.8552 16 7 7.9680 6.6516 -5.9255 17 6 9.1966 7.2523 -5.8798 18 6 9.8656 7.0131 -7.0188 19 6 11.2517 7.4946 -7.3622 20 8 12.1721 6.4058 -7.2641 21 14 11.7533 8.8405 -6.1758 22 6 8.9902 6.2008 -7.8673 23 6 9.1151 5.6494 -9.1435 24 6 8.0872 4.9191 -9.6706 25 6 6.9198 4.7206 -8.9468 26 6 6.7754 5.2559 -7.6853 27 6 7.8086 6.0028 -7.1294 28 6 3.9867 3.5763 -1.3973 29 1 -0.3633 0.5137 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5138 0.8899 32 1 1.8933 -0.5138 -0.8899 33 1 1.8933 -0.5137 0.8901 34 1 5.9127 2.0750 -0.4285 35 1 5.8892 3.2437 0.9626 36 1 7.3982 4.0586 -1.6697 37 1 6.2380 3.2063 -2.7165 38 1 5.6010 5.9579 -2.7368 39 1 5.9706 6.7323 -5.2917 40 1 7.1300 7.5855 -4.2446 41 1 9.5733 7.8310 -5.0495 42 1 11.2588 7.8857 -8.3796 43 1 12.2181 6.0078 -6.3841 44 1 11.7169 8.3288 -4.7823 45 1 13.1188 9.3234 -6.5035 46 1 10.0208 5.7994 -9.7124 47 1 8.1842 4.4930 -10.6582 48 1 6.1164 4.1407 -9.3766 49 1 5.8628 5.0961 -7.1303 50 1 3.2297 4.3427 -1.5634 51 1 4.0393 2.8492 -2.2078 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15509216_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:53:23 Heat of formation + Delta-G solvation = -100.529662 kcal Electronic energy + Delta-G solvation = -35935.441597 eV Core-core repulsion = 30910.891943 eV Total energy + Delta-G solvation = -5024.549654 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.167 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -48.96290 -42.53800 -41.86812 -40.70289 -39.24368 -38.15795 -37.74917 -37.56955 -35.77603 -34.12074 -32.72636 -31.64156 -30.34957 -30.20674 -28.63331 -27.18969 -26.48108 -25.47899 -23.88944 -23.66338 -22.70812 -22.06683 -21.76043 -20.77122 -20.63015 -19.28118 -18.70332 -18.47947 -17.94057 -17.78608 -17.57052 -17.38286 -17.23380 -16.83259 -16.42832 -16.34444 -16.19390 -16.05562 -15.88143 -15.44287 -15.36587 -15.13150 -14.84871 -14.73766 -14.62992 -14.50042 -14.40949 -14.10845 -14.08876 -13.69168 -13.65748 -13.53824 -13.14013 -13.01375 -12.94897 -12.73144 -12.62060 -12.57338 -12.51915 -12.38814 -12.01426 -11.95574 -11.74141 -11.60814 -11.58856 -11.43364 -11.19752 -10.55878 -10.46051 -10.33824 -9.15866 -8.63590 -4.89726 0.14463 0.63986 0.98621 1.33486 1.39079 1.39830 1.55533 1.61279 1.69227 1.99518 2.10533 2.82518 2.92264 2.96540 3.10807 3.23585 3.37808 3.49978 3.59937 3.68046 3.73039 3.82172 3.85111 3.93910 4.00778 4.04142 4.13194 4.16029 4.22423 4.25545 4.28937 4.30700 4.44357 4.49821 4.50945 4.53495 4.59366 4.72007 4.72236 4.77093 4.79278 4.80307 4.87019 4.90064 5.06875 5.10655 5.14221 5.19930 5.38469 5.51333 5.66935 5.73944 5.75465 6.15630 6.22552 6.38234 6.53606 6.58497 7.03234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.358 6.358 4 C 0.472 3.528 5 O -0.537 6.537 6 C -0.107 4.107 7 H 0.151 0.849 8 C -0.134 4.134 9 C 0.097 3.903 10 F -0.182 7.182 11 C 0.115 3.885 12 N -0.711 5.711 13 C 0.493 3.507 14 O -0.571 6.571 15 C 0.088 3.912 16 N -0.466 5.466 17 C 0.074 3.926 18 C -0.216 4.216 19 C -0.056 4.056 20 O -0.556 6.556 21 Si 0.786 3.214 22 C -0.116 4.116 23 C -0.088 4.088 24 C -0.154 4.154 25 C -0.107 4.107 26 C -0.133 4.133 27 C 0.091 3.909 28 C -0.126 4.126 29 H 0.070 0.930 30 H 0.095 0.905 31 H 0.069 0.931 32 H 0.068 0.932 33 H 0.067 0.933 34 H 0.109 0.891 35 H 0.103 0.897 36 H 0.072 0.928 37 H 0.086 0.914 38 H 0.422 0.578 39 H 0.149 0.851 40 H 0.165 0.835 41 H 0.197 0.803 42 H 0.110 0.890 43 H 0.381 0.619 44 H -0.274 1.274 45 H -0.304 1.304 46 H 0.118 0.882 47 H 0.136 0.864 48 H 0.145 0.855 49 H 0.135 0.865 50 H 0.120 0.880 51 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.652 5.421 3.634 11.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.316 3.684 5 O -0.427 6.427 6 C -0.126 4.126 7 H 0.169 0.831 8 C -0.172 4.172 9 C 0.078 3.922 10 F -0.162 7.162 11 C -0.009 4.009 12 N -0.365 5.365 13 C 0.278 3.722 14 O -0.449 6.449 15 C -0.036 4.036 16 N -0.148 5.148 17 C -0.052 4.052 18 C -0.223 4.223 19 C -0.164 4.164 20 O -0.364 6.364 21 Si 0.690 3.310 22 C -0.120 4.120 23 C -0.107 4.107 24 C -0.173 4.173 25 C -0.126 4.126 26 C -0.154 4.154 27 C -0.014 4.014 28 C -0.163 4.163 29 H 0.089 0.911 30 H 0.113 0.887 31 H 0.088 0.912 32 H 0.087 0.913 33 H 0.085 0.915 34 H 0.127 0.873 35 H 0.121 0.879 36 H 0.091 0.909 37 H 0.105 0.895 38 H 0.260 0.740 39 H 0.166 0.834 40 H 0.183 0.817 41 H 0.213 0.787 42 H 0.128 0.872 43 H 0.230 0.770 44 H -0.201 1.201 45 H -0.232 1.232 46 H 0.136 0.864 47 H 0.154 0.846 48 H 0.163 0.837 49 H 0.152 0.848 50 H 0.138 0.862 51 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -8.460 4.955 3.717 10.485 hybrid contribution 0.399 -1.585 0.513 1.713 sum -8.062 3.370 4.230 9.708 Atomic orbital electron populations 1.21827 0.90653 1.04265 1.03820 1.23263 0.96961 0.79288 1.02495 1.86520 1.24146 1.33500 1.83325 1.23883 0.80613 0.92734 0.71126 1.90689 1.61174 1.44168 1.46654 1.22621 0.96859 0.90379 1.02755 0.83148 1.23601 0.93871 0.98279 1.01468 1.21771 0.97047 0.80569 0.92794 1.92900 1.97148 1.42477 1.83716 1.21716 0.98944 0.89421 0.90867 1.45656 1.37617 1.24391 1.28847 1.21515 0.80659 0.88647 0.81333 1.90817 1.36711 1.46137 1.71283 1.21991 0.94851 0.97937 0.88824 1.43415 1.14686 1.44201 1.12537 1.22015 0.84795 0.99122 0.99218 1.20710 0.97814 1.07772 0.96001 1.24716 0.85166 0.96135 1.10386 1.86553 1.62902 1.49876 1.37032 0.94199 0.81549 0.80869 0.74420 1.19336 0.94481 1.02546 0.95619 1.20449 0.99100 0.97211 0.93898 1.20921 0.94029 1.01070 1.01269 1.21136 0.98304 0.99431 0.93761 1.20256 0.97944 1.00389 0.96787 1.18400 0.96907 0.99157 0.86894 1.23611 0.96446 1.01270 0.94973 0.91089 0.88657 0.91229 0.91336 0.91488 0.87265 0.87879 0.90946 0.89543 0.74027 0.83369 0.81723 0.78667 0.87190 0.77042 1.20053 1.23172 0.86378 0.84645 0.83681 0.84753 0.86200 0.87314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.75 10.29 71.98 0.74 1.49 16 2 C 0.05 -0.03 6.19 71.98 0.45 0.42 16 3 O -0.36 -0.43 10.22 -51.38 -0.53 -0.96 16 4 C 0.47 0.79 7.48 71.24 0.53 1.33 16 5 O -0.54 -4.48 15.65 21.96 0.34 -4.14 16 6 C -0.11 0.56 4.24 -11.01 -0.05 0.52 16 7 H 0.15 -1.27 8.14 -2.39 -0.02 -1.29 16 8 C -0.13 0.64 6.86 31.12 0.21 0.86 16 9 C 0.10 -0.68 1.72 -10.28 -0.02 -0.70 16 10 F -0.18 0.98 16.64 44.97 0.75 1.73 16 11 C 0.12 -0.50 5.41 86.38 0.47 -0.03 16 12 N -0.71 4.90 5.45 -463.05 -2.53 2.37 16 13 C 0.49 -0.65 7.90 87.65 0.69 0.04 16 14 O -0.57 -6.05 16.42 -3.03 -0.05 -6.10 16 15 C 0.09 -0.68 6.48 85.63 0.56 -0.12 16 16 N -0.47 -0.59 2.27 -520.01 -1.18 -1.77 16 17 C 0.07 0.09 9.89 83.00 0.82 0.91 16 18 C -0.22 -1.22 5.58 -18.63 -0.10 -1.32 16 19 C -0.06 -0.23 3.06 71.24 0.22 -0.02 16 20 O -0.56 -4.88 12.88 -148.98 -1.92 -6.80 16 21 Si 0.79 -0.71 30.81 68.60 2.11 1.40 16 22 C -0.12 -1.11 6.35 -20.20 -0.13 -1.24 16 23 C -0.09 -0.82 10.05 22.23 0.22 -0.60 16 24 C -0.15 -0.98 9.97 22.03 0.22 -0.77 16 25 C -0.11 -0.48 10.01 22.30 0.22 -0.25 16 26 C -0.13 -0.61 10.00 22.37 0.22 -0.38 16 27 C 0.09 0.62 6.80 39.03 0.27 0.88 16 28 C -0.13 1.09 7.07 31.11 0.22 1.31 16 29 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 30 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 31 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 32 H 0.07 -0.01 8.13 -2.39 -0.02 -0.03 16 33 H 0.07 0.01 8.13 -2.39 -0.02 -0.01 16 34 H 0.11 -0.25 7.39 -2.38 -0.02 -0.27 16 35 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 36 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 37 H 0.09 -0.23 7.88 -2.39 -0.02 -0.25 16 38 H 0.42 -5.51 8.08 -92.71 -0.75 -6.26 16 39 H 0.15 -1.97 8.14 -2.39 -0.02 -1.99 16 40 H 0.17 -2.59 8.12 -2.38 -0.02 -2.61 16 41 H 0.20 -1.06 6.27 -2.92 -0.02 -1.08 16 42 H 0.11 0.42 7.96 -2.39 -0.02 0.40 16 43 H 0.38 1.48 8.70 -74.06 -0.64 0.83 16 44 H -0.27 -0.34 7.00 99.48 0.70 0.35 16 45 H -0.30 -2.11 7.11 99.48 0.71 -1.40 16 46 H 0.12 1.00 8.06 -2.91 -0.02 0.98 16 47 H 0.14 0.33 8.06 -2.91 -0.02 0.30 16 48 H 0.15 -0.11 8.06 -2.91 -0.02 -0.13 16 49 H 0.13 -0.09 8.06 -2.91 -0.02 -0.11 16 50 H 0.12 -1.46 8.14 -2.39 -0.02 -1.48 16 51 H 0.11 -0.89 7.87 -2.38 -0.02 -0.91 16 Total: 0.00 -31.47 435.70 2.38 -29.09 By element: Atomic # 1 Polarization: -16.75 SS G_CDS: -0.39 Total: -17.14 kcal Atomic # 6 Polarization: -3.45 SS G_CDS: 5.76 Total: 2.31 kcal Atomic # 7 Polarization: 4.31 SS G_CDS: -3.71 Total: 0.61 kcal Atomic # 8 Polarization: -15.85 SS G_CDS: -2.15 Total: -18.00 kcal Atomic # 9 Polarization: 0.98 SS G_CDS: 0.75 Total: 1.73 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: 2.11 Total: 1.40 kcal Total: -31.47 2.38 -29.09 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15509216_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.443 kcal (2) G-P(sol) polarization free energy of solvation -31.469 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.087 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds