Wall clock time and date at job start Sun Mar 7 2021 05:38:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.34783 * 119.99926 * 2 1 4 4 O 1.21696 * 119.99833 * 186.23649 * 3 2 1 5 5 C 1.46671 * 119.99945 * 6.23316 * 3 2 1 6 6 C 1.37868 * 126.23133 * 187.93590 * 5 3 2 7 7 C 1.39835 * 107.08818 * 179.97438 * 6 5 3 8 8 C 1.50698 * 126.07074 * 179.97438 * 7 6 5 9 9 O 1.42896 * 109.47319 * 65.00397 * 8 7 6 10 10 Si 1.86305 * 109.47097 * 185.00256 * 8 7 6 11 11 C 1.35457 * 107.86031 * 0.02562 * 7 6 5 12 12 N 1.35528 * 108.87369 * 359.76453 * 11 7 6 13 13 C 1.46500 * 120.00157 * 180.02562 * 2 1 3 14 14 H 1.08998 * 109.47250 * 180.02562 * 13 2 1 15 15 C 1.53000 * 109.46687 * 300.00039 * 13 2 1 16 16 C 1.53002 * 109.47086 * 180.02562 * 15 13 2 17 17 C 1.53003 * 109.46836 * 299.99660 * 16 15 13 18 18 H 1.09001 * 109.46887 * 180.02562 * 17 16 15 19 19 O 1.42902 * 109.47124 * 300.00000 * 17 16 15 20 20 C 1.53000 * 109.47005 * 60.00290 * 17 16 15 21 21 C 1.53002 * 109.47086 * 299.99556 * 20 17 16 22 22 H 1.08998 * 109.47003 * 275.80303 * 1 2 3 23 23 H 1.09001 * 109.46629 * 35.80421 * 1 2 3 24 24 H 1.08998 * 109.47473 * 155.80350 * 1 2 3 25 25 H 1.08006 * 126.45879 * 359.93359 * 6 5 3 26 26 H 1.09001 * 109.47286 * 304.99885 * 8 7 6 27 27 H 0.96699 * 114.00166 * 59.99776 * 9 8 7 28 28 H 1.48502 * 110.00107 * 58.67909 * 10 8 7 29 29 H 1.48503 * 109.99970 * 180.02562 * 10 8 7 30 30 H 1.08003 * 125.56251 * 180.02562 * 11 7 6 31 31 H 0.96996 * 125.68317 * 180.25969 * 12 11 7 32 32 H 1.08999 * 109.47411 * 299.99443 * 15 13 2 33 33 H 1.09002 * 109.47585 * 59.99842 * 15 13 2 34 34 H 1.09002 * 109.47311 * 179.97438 * 16 15 13 35 35 H 1.09002 * 109.47181 * 59.99418 * 16 15 13 36 36 H 0.96701 * 113.99894 * 300.00023 * 19 17 16 37 37 H 1.08989 * 109.47225 * 59.99946 * 20 17 16 38 38 H 1.09009 * 109.46907 * 180.02562 * 20 17 16 39 39 H 1.08993 * 109.47538 * 180.02562 * 21 20 17 40 40 H 1.09002 * 109.47181 * 300.00581 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1673 0.0000 4 8 3.3505 1.1704 -0.1145 5 6 1.4120 2.4337 0.1379 6 6 1.9448 3.6980 0.0021 7 6 0.9038 4.6074 0.2133 8 6 1.0146 6.1096 0.1658 9 8 1.3460 6.5210 -1.1619 10 14 -0.6127 6.8683 0.6631 11 6 -0.2217 3.8985 0.4694 12 7 0.0727 2.5764 0.4217 13 6 2.1976 -1.2687 -0.0006 14 1 3.2692 -1.0695 0.0000 15 6 1.8279 -2.0715 1.2483 16 6 2.5934 -3.3963 1.2482 17 6 2.2242 -4.1983 -0.0014 18 1 2.7692 -5.1423 -0.0013 19 8 0.8194 -4.4599 -0.0018 20 6 2.5939 -3.3955 -1.2503 21 6 1.8284 -2.0708 -1.2501 22 1 -0.3633 0.1039 1.0224 23 1 -0.3632 0.8335 -0.6012 24 1 -0.3634 -0.9373 -0.4212 25 1 2.9727 3.9404 -0.2241 26 1 1.7939 6.4384 0.8533 27 1 0.6948 6.2617 -1.8281 28 1 -0.9842 6.4227 2.0301 29 1 -0.5167 8.3496 0.6197 30 1 -1.1956 4.3182 0.6736 31 1 -0.5555 1.8514 0.5652 32 1 2.0912 -1.5004 2.1386 33 1 0.7562 -2.2707 1.2483 34 1 2.3304 -3.9680 2.1381 35 1 3.6650 -3.1967 1.2484 36 1 0.5134 -4.9664 0.7631 37 1 3.6654 -3.1960 -1.2500 38 1 2.3305 -3.9668 -2.1406 39 1 2.0914 -1.4990 -2.1400 40 1 0.7568 -2.2703 -1.2504 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:38:01 Heat of formation + Delta-G solvation = -53.013807 kcal Electronic energy + Delta-G solvation = -22783.192664 eV Core-core repulsion = 19372.819419 eV Total energy + Delta-G solvation = -3410.373244 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.65237 -40.98417 -39.49068 -37.62187 -37.13500 -35.12555 -32.62181 -31.94155 -30.98463 -29.93828 -28.19098 -26.49465 -24.47669 -23.85736 -22.43032 -21.16478 -20.80225 -20.66026 -18.95486 -17.95765 -17.62802 -17.27357 -17.16546 -16.72622 -16.36807 -15.93672 -15.74143 -15.45733 -14.89287 -14.73230 -14.53138 -14.43168 -14.19287 -14.08237 -13.87635 -13.47903 -13.43971 -13.35994 -13.29749 -13.04338 -12.47798 -12.19275 -12.18587 -11.91431 -11.51132 -11.36334 -11.06948 -10.81971 -10.31378 -9.95985 -9.76251 -9.25922 -5.03230 0.44568 1.37149 1.52094 1.67351 1.75827 2.03276 2.09370 2.38453 3.19173 3.40807 3.60207 3.64520 3.66490 3.72241 3.86541 3.91960 3.95345 4.01018 4.06495 4.15028 4.26631 4.30472 4.39523 4.40499 4.47616 4.53207 4.70740 4.80032 4.83079 4.91803 4.94968 5.02863 5.06933 5.10048 5.19129 5.29494 5.41339 5.66159 5.85079 6.22040 6.30533 6.60405 6.74101 7.10959 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.613 5.613 3 C 0.591 3.409 4 O -0.524 6.524 5 C -0.056 4.056 6 C -0.076 4.076 7 C -0.211 4.211 8 C -0.033 4.033 9 O -0.542 6.542 10 Si 0.686 3.314 11 C 0.029 3.971 12 N -0.541 5.541 13 C 0.142 3.858 14 H 0.103 0.897 15 C -0.122 4.122 16 C -0.150 4.150 17 C 0.103 3.897 18 H 0.058 0.942 19 O -0.564 6.564 20 C -0.110 4.110 21 C -0.124 4.124 22 H 0.059 0.941 23 H 0.074 0.926 24 H 0.092 0.908 25 H 0.149 0.851 26 H 0.111 0.889 27 H 0.377 0.623 28 H -0.258 1.258 29 H -0.256 1.256 30 H 0.175 0.825 31 H 0.422 0.578 32 H 0.064 0.936 33 H 0.072 0.928 34 H 0.070 0.930 35 H 0.076 0.924 36 H 0.377 0.623 37 H 0.079 0.921 38 H 0.075 0.925 39 H 0.066 0.934 40 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.443 -3.904 0.542 7.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.345 5.345 3 C 0.380 3.620 4 O -0.400 6.400 5 C -0.168 4.168 6 C -0.103 4.103 7 C -0.217 4.217 8 C -0.145 4.145 9 O -0.347 6.347 10 Si 0.588 3.412 11 C -0.108 4.108 12 N -0.144 5.144 13 C 0.039 3.961 14 H 0.121 0.879 15 C -0.161 4.161 16 C -0.189 4.189 17 C 0.044 3.956 18 H 0.076 0.924 19 O -0.370 6.370 20 C -0.148 4.148 21 C -0.162 4.162 22 H 0.077 0.923 23 H 0.092 0.908 24 H 0.110 0.890 25 H 0.167 0.833 26 H 0.128 0.872 27 H 0.224 0.776 28 H -0.182 1.182 29 H -0.181 1.181 30 H 0.192 0.808 31 H 0.267 0.733 32 H 0.083 0.917 33 H 0.091 0.909 34 H 0.089 0.911 35 H 0.095 0.905 36 H 0.224 0.776 37 H 0.098 0.902 38 H 0.094 0.906 39 H 0.085 0.915 40 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -5.742 -2.976 0.821 6.519 hybrid contribution 0.119 -0.877 0.909 1.268 sum -5.623 -3.852 1.730 7.032 Atomic orbital electron populations 1.22123 0.80615 1.04531 1.01367 1.47759 1.06457 1.05960 1.74360 1.17143 0.86655 0.81873 0.76289 1.90857 1.12990 1.86324 1.49846 1.20347 0.83925 0.95076 1.17438 1.21214 0.99624 0.89118 1.00327 1.19894 0.93580 0.96130 1.12143 1.24376 1.10286 0.91681 0.88153 1.86502 1.51862 1.80052 1.16313 0.95203 0.81295 0.80761 0.83904 1.21927 0.99766 0.83038 1.06080 1.42994 1.09008 1.08060 1.54319 1.21173 0.98082 0.81744 0.95076 0.87933 1.21780 1.01316 0.95557 0.97424 1.22226 1.01444 0.96603 0.98597 1.21812 0.82109 0.96875 0.94826 0.92375 1.86507 1.23211 1.77723 1.49558 1.21520 1.00421 0.95487 0.97397 1.21792 1.01633 0.95461 0.97308 0.92303 0.90771 0.88990 0.83302 0.87177 0.77616 1.18248 1.18091 0.80771 0.73292 0.91731 0.90926 0.91128 0.90543 0.77603 0.90220 0.90648 0.91484 0.90646 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.18 7.82 59.85 0.47 0.29 16 2 N -0.61 -0.28 2.76 -175.48 -0.48 -0.77 16 3 C 0.59 2.09 7.63 -12.85 -0.10 1.99 16 4 O -0.52 -3.83 16.24 5.19 0.08 -3.75 16 5 C -0.06 -0.12 6.63 -81.98 -0.54 -0.66 16 6 C -0.08 -0.23 10.60 -39.12 -0.41 -0.64 16 7 C -0.21 -0.15 5.43 -105.02 -0.57 -0.72 16 8 C -0.03 -0.01 3.02 36.00 0.11 0.10 16 9 O -0.54 -0.65 12.88 -35.23 -0.45 -1.10 16 10 Si 0.69 -0.98 30.60 -169.99 -5.20 -6.18 16 11 C 0.03 -0.05 10.45 -16.91 -0.18 -0.22 16 12 N -0.54 0.77 5.07 -9.39 -0.05 0.72 16 13 C 0.14 0.06 2.51 -67.93 -0.17 -0.11 16 14 H 0.10 0.26 6.91 -51.93 -0.36 -0.10 16 15 C -0.12 0.12 5.06 -26.73 -0.14 -0.01 16 16 C -0.15 0.28 5.64 -26.73 -0.15 0.13 16 17 C 0.10 -0.16 3.77 -26.73 -0.10 -0.26 16 18 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 19 O -0.56 0.61 11.97 -35.23 -0.42 0.19 16 20 C -0.11 0.09 5.66 -26.73 -0.15 -0.06 16 21 C -0.12 0.03 5.05 -26.73 -0.13 -0.11 16 22 H 0.06 -0.27 7.45 -51.93 -0.39 -0.65 16 23 H 0.07 -0.29 5.68 -51.93 -0.29 -0.58 16 24 H 0.09 -0.33 6.44 -51.93 -0.33 -0.67 16 25 H 0.15 0.59 8.06 -52.48 -0.42 0.17 16 26 H 0.11 0.14 7.96 -51.93 -0.41 -0.27 16 27 H 0.38 -1.08 8.70 45.56 0.40 -0.68 16 28 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 29 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 30 H 0.18 -0.86 6.21 -52.48 -0.33 -1.18 16 31 H 0.42 -1.76 4.94 -40.82 -0.20 -1.96 16 32 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.07 -0.10 7.21 -51.93 -0.37 -0.47 16 34 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 35 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.38 -1.67 9.08 45.56 0.41 -1.26 16 37 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 38 H 0.07 -0.04 8.14 -51.92 -0.42 -0.46 16 39 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 40 H 0.07 -0.01 6.21 -51.93 -0.32 -0.33 16 LS Contribution 314.84 15.07 4.74 4.74 Total: 0.00 -9.24 314.84 -8.63 -17.87 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -4.78 Total: -11.43 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -2.07 Total: -0.29 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -0.53 Total: -0.05 kcal Atomic # 8 Polarization: -3.87 SS G_CDS: -0.79 Total: -4.66 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.20 Total: -6.18 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -9.24 -8.63 -17.87 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.142 kcal (2) G-P(sol) polarization free energy of solvation -9.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.381 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.633 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.014 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds