Wall clock time and date at job start Sun Mar 7 2021 05:38:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42913 * 1 3 3 C 1.35708 * 116.99564 * 2 1 4 4 C 1.38690 * 119.86839 * 0.02562 * 3 2 1 5 5 C 1.38442 * 120.03253 * 179.97438 * 4 3 2 6 6 O 1.35648 * 120.11850 * 180.02562 * 5 4 3 7 7 C 1.42902 * 117.00394 * 0.02562 * 6 5 4 8 8 C 1.40295 * 119.76079 * 0.02562 * 5 4 3 9 9 C 1.47301 * 120.13559 * 179.97438 * 8 5 4 10 10 O 1.21618 * 119.99966 * 310.64630 * 9 8 5 11 11 N 1.34779 * 119.99948 * 130.64866 * 9 8 5 12 12 C 1.46499 * 120.00002 * 4.44172 * 11 9 8 13 13 C 1.46500 * 119.99628 * 184.44932 * 11 9 8 14 14 H 1.09001 * 109.47278 * 359.97438 * 13 11 9 15 15 C 1.53004 * 109.47181 * 119.99708 * 13 11 9 16 16 C 1.52999 * 109.46758 * 179.97438 * 15 13 11 17 17 C 1.52998 * 109.47367 * 299.99541 * 16 15 13 18 18 H 1.09000 * 109.47063 * 180.02562 * 17 16 15 19 19 O 1.42901 * 109.47263 * 300.00511 * 17 16 15 20 20 C 1.53004 * 109.46807 * 60.00488 * 17 16 15 21 21 C 1.53000 * 109.47093 * 299.99711 * 20 17 16 22 22 C 1.39857 * 119.73067 * 0.02562 * 8 5 4 23 23 C 1.37547 * 119.96566 * 359.97438 * 22 8 5 24 24 C 1.50689 * 119.88228 * 179.97438 * 23 22 8 25 25 O 1.42901 * 109.47359 * 255.00020 * 24 23 22 26 26 Si 1.86302 * 109.47306 * 15.00056 * 24 23 22 27 27 H 1.08999 * 109.46884 * 299.99997 * 1 2 3 28 28 H 1.08996 * 109.46817 * 59.99812 * 1 2 3 29 29 H 1.09001 * 109.46829 * 179.97438 * 1 2 3 30 30 H 1.07999 * 119.98337 * 359.97438 * 4 3 2 31 31 H 1.09009 * 109.46593 * 300.00368 * 7 6 5 32 32 H 1.09001 * 109.47062 * 59.99987 * 7 6 5 33 33 H 1.08997 * 109.47766 * 180.02562 * 7 6 5 34 34 H 1.09007 * 109.46677 * 93.15415 * 12 11 9 35 35 H 1.08992 * 109.47006 * 213.15113 * 12 11 9 36 36 H 1.08999 * 109.47259 * 333.15780 * 12 11 9 37 37 H 1.08998 * 109.46779 * 299.99802 * 15 13 11 38 38 H 1.08999 * 109.46773 * 59.99362 * 15 13 11 39 39 H 1.09001 * 109.46328 * 180.02562 * 16 15 13 40 40 H 1.08991 * 109.47157 * 60.00321 * 16 15 13 41 41 H 0.96697 * 114.00341 * 299.99684 * 19 17 16 42 42 H 1.08998 * 109.46779 * 179.97438 * 20 17 16 43 43 H 1.09001 * 109.46970 * 59.99741 * 20 17 16 44 44 H 1.08999 * 109.47682 * 300.00490 * 21 20 17 45 45 H 1.09005 * 109.47058 * 179.97438 * 21 20 17 46 46 H 1.07998 * 120.02128 * 179.72515 * 22 8 5 47 47 H 1.09001 * 109.47636 * 135.00380 * 24 23 22 48 48 H 0.96694 * 113.99899 * 300.00278 * 25 24 23 49 49 H 1.48506 * 109.99975 * 298.68432 * 26 24 23 50 50 H 1.48496 * 109.99843 * 60.00154 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0451 1.2092 0.0000 4 6 1.2870 2.3706 0.0005 5 6 1.9119 3.6059 0.0011 6 8 1.1721 4.7429 0.0021 7 6 -0.2490 4.5924 0.0032 8 6 3.3130 3.6776 0.0005 9 6 3.9865 4.9877 0.0005 10 8 3.6540 5.8423 -0.7983 11 7 4.9712 5.2392 0.8858 12 6 5.4384 4.1791 1.7825 13 6 5.5741 6.5728 0.9513 14 1 5.1012 7.2220 0.2144 15 6 5.3706 7.1563 2.3510 16 6 6.0009 8.5487 2.4195 17 6 7.4983 8.4460 2.1226 18 1 7.9474 9.4380 2.1719 19 8 8.1181 7.5945 3.0884 20 6 7.7018 7.8625 0.7229 21 6 7.0715 6.4700 0.6543 22 6 4.0678 2.5002 -0.0011 23 6 3.4353 1.2788 -0.0016 24 6 4.2504 0.0113 -0.0040 25 8 4.2132 -0.5766 -1.3059 26 14 6.0138 0.4061 0.4489 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 0.2087 2.3112 0.0005 31 1 -0.5568 4.0434 -0.8868 32 1 -0.5554 4.0428 0.8932 33 1 -0.7186 5.5760 0.0035 34 1 6.2901 3.6703 1.3308 35 1 5.7391 4.6153 2.7350 36 1 4.6337 3.4629 1.9487 37 1 4.3039 7.2290 2.5627 38 1 5.8438 6.5069 3.0876 39 1 5.8563 8.9642 3.4168 40 1 5.5281 9.1982 1.6829 41 1 8.0287 7.9035 4.0003 42 1 8.7685 7.7897 0.5112 43 1 7.2289 8.5120 -0.0137 44 1 7.5443 5.8204 1.3910 45 1 7.2161 6.0545 -0.3430 46 1 5.1466 2.5499 -0.0060 47 1 3.8366 -0.6882 0.7224 48 1 3.3242 -0.8085 -1.6075 49 1 6.5996 1.3341 -0.5516 50 1 6.0662 1.0180 1.8009 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:38:19 Heat of formation + Delta-G solvation = -154.420306 kcal Electronic energy + Delta-G solvation = -33615.291635 eV Core-core repulsion = 29189.281223 eV Total energy + Delta-G solvation = -4426.010412 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.37756 -41.24373 -40.25190 -39.63950 -38.47241 -37.17211 -37.07117 -34.99854 -32.39110 -32.11212 -31.90653 -29.98556 -29.10644 -28.30057 -28.00923 -26.14570 -24.93966 -23.85129 -23.43724 -22.64856 -20.97757 -20.56898 -19.93770 -18.74476 -18.60061 -17.99182 -17.87850 -17.61247 -17.21651 -17.14688 -16.76903 -16.60606 -16.42781 -16.14034 -15.90671 -15.71716 -15.56662 -15.27351 -14.57473 -14.48300 -14.42250 -14.28343 -14.16756 -13.99548 -13.73944 -13.45849 -13.38208 -13.31123 -13.21407 -13.06614 -12.70879 -12.64512 -12.62521 -12.46807 -12.20778 -12.13700 -11.76841 -11.54989 -11.41334 -11.33530 -11.21738 -10.95236 -10.72132 -10.05190 -9.86650 -9.32210 -4.85335 -0.33520 -0.08863 1.32300 1.40775 1.59558 1.74477 1.92726 1.95114 2.02174 2.26322 3.20273 3.34422 3.34983 3.45583 3.61381 3.65377 3.67724 3.87613 3.92044 3.93489 3.99410 4.03250 4.04716 4.11870 4.12873 4.19487 4.23003 4.26054 4.28350 4.32980 4.37477 4.38359 4.42922 4.53987 4.55457 4.60833 4.64751 4.66243 4.76801 4.84724 4.89300 4.91256 4.96814 5.06101 5.07295 5.12704 5.19958 5.30065 5.41417 5.87817 6.08034 6.17884 6.62802 6.90274 6.91569 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.310 6.310 3 C 0.208 3.792 4 C -0.296 4.296 5 C 0.211 3.789 6 O -0.322 6.322 7 C 0.013 3.987 8 C -0.221 4.221 9 C 0.566 3.434 10 O -0.569 6.569 11 N -0.604 5.604 12 C 0.065 3.935 13 C 0.140 3.860 14 H 0.076 0.924 15 C -0.115 4.115 16 C -0.145 4.145 17 C 0.107 3.893 18 H 0.071 0.929 19 O -0.578 6.578 20 C -0.113 4.113 21 C -0.117 4.117 22 C -0.019 4.019 23 C -0.195 4.195 24 C -0.074 4.074 25 O -0.548 6.548 26 Si 0.785 3.215 27 H 0.070 0.930 28 H 0.068 0.932 29 H 0.127 0.873 30 H 0.173 0.827 31 H 0.071 0.929 32 H 0.078 0.922 33 H 0.116 0.884 34 H 0.058 0.942 35 H 0.096 0.904 36 H 0.078 0.922 37 H 0.055 0.945 38 H 0.081 0.919 39 H 0.088 0.912 40 H 0.072 0.928 41 H 0.392 0.608 42 H 0.074 0.926 43 H 0.080 0.920 44 H 0.075 0.925 45 H 0.049 0.951 46 H 0.137 0.863 47 H 0.092 0.908 48 H 0.374 0.626 49 H -0.292 1.292 50 H -0.241 1.241 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.268 -3.582 6.078 7.776 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.222 6.222 3 C 0.160 3.840 4 C -0.315 4.315 5 C 0.162 3.838 6 O -0.234 6.234 7 C -0.081 4.081 8 C -0.225 4.225 9 C 0.356 3.644 10 O -0.449 6.449 11 N -0.336 5.336 12 C -0.077 4.077 13 C 0.037 3.963 14 H 0.095 0.905 15 C -0.153 4.153 16 C -0.183 4.183 17 C 0.048 3.952 18 H 0.089 0.911 19 O -0.386 6.386 20 C -0.150 4.150 21 C -0.155 4.155 22 C -0.037 4.037 23 C -0.196 4.196 24 C -0.182 4.182 25 O -0.355 6.355 26 Si 0.686 3.314 27 H 0.089 0.911 28 H 0.087 0.913 29 H 0.145 0.855 30 H 0.190 0.810 31 H 0.090 0.910 32 H 0.096 0.904 33 H 0.134 0.866 34 H 0.077 0.923 35 H 0.115 0.885 36 H 0.096 0.904 37 H 0.074 0.926 38 H 0.099 0.901 39 H 0.106 0.894 40 H 0.091 0.909 41 H 0.241 0.759 42 H 0.093 0.907 43 H 0.099 0.901 44 H 0.094 0.906 45 H 0.068 0.932 46 H 0.154 0.846 47 H 0.110 0.890 48 H 0.223 0.777 49 H -0.220 1.220 50 H -0.165 1.165 Dipole moment (debyes) X Y Z Total from point charges -1.995 -2.769 5.409 6.395 hybrid contribution -2.361 0.982 -0.141 2.561 sum -4.356 -1.786 5.268 7.065 Atomic orbital electron populations 1.23536 0.75480 1.06508 1.02717 1.86049 1.24110 1.25261 1.86778 1.18727 0.90913 0.84680 0.89664 1.21448 1.02326 0.90268 1.17500 1.18749 0.89373 0.85947 0.89722 1.86184 1.21637 1.28846 1.86686 1.23512 0.75659 1.05955 1.02988 1.18978 0.91541 0.93530 1.18429 1.18244 0.79172 0.86850 0.80133 1.90753 1.65531 1.48644 1.39967 1.47899 1.36161 1.12943 1.36554 1.22176 1.00100 0.90616 0.94824 1.21191 0.93599 0.82574 0.98897 0.90533 1.21708 1.00496 0.97553 0.95571 1.22207 0.96209 0.96283 1.03641 1.21756 0.91377 0.93348 0.88690 0.91120 1.86481 1.78973 1.52917 1.20240 1.21553 1.01652 0.95886 0.95956 1.21710 0.93730 0.98749 1.01333 1.20834 0.99191 0.90053 0.93647 1.19650 0.91732 0.96235 1.11985 1.25257 1.12551 0.91703 0.88668 1.86687 1.34277 1.82074 1.32447 0.92640 0.76037 0.85064 0.77664 0.91117 0.91321 0.85468 0.81017 0.91006 0.90360 0.86566 0.92313 0.88524 0.90379 0.92641 0.90091 0.89374 0.90934 0.75860 0.90714 0.90111 0.90589 0.93201 0.84552 0.89005 0.77738 1.22002 1.16522 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.31 0.36 9.36 -90.29 -0.85 -0.49 16 3 C 0.21 0.60 6.62 22.61 0.15 0.75 16 4 C -0.30 -0.74 8.01 22.43 0.18 -0.56 16 5 C 0.21 1.85 6.67 22.82 0.15 2.00 16 6 O -0.32 -3.05 9.54 -80.88 -0.77 -3.83 16 7 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 8 C -0.22 -2.51 4.89 -20.00 -0.10 -2.60 16 9 C 0.57 8.52 6.93 86.63 0.60 9.12 16 10 O -0.57 -12.86 15.88 4.66 0.07 -12.78 16 11 N -0.60 -5.41 2.76 -826.59 -2.28 -7.69 16 12 C 0.06 0.21 8.17 127.77 1.04 1.25 16 13 C 0.14 0.98 2.52 44.99 0.11 1.10 16 14 H 0.08 0.93 6.91 -2.39 -0.02 0.91 16 15 C -0.12 -0.26 5.03 30.60 0.15 -0.10 16 16 C -0.15 0.20 5.64 30.59 0.17 0.38 16 17 C 0.11 -0.11 3.77 30.60 0.12 0.01 16 18 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 19 O -0.58 0.25 11.97 -148.98 -1.78 -1.53 16 20 C -0.11 -0.22 5.66 30.60 0.17 -0.05 16 21 C -0.12 -0.60 5.06 30.60 0.15 -0.44 16 22 C -0.02 -0.15 6.20 22.50 0.14 -0.01 16 23 C -0.19 -1.02 5.27 -19.80 -0.10 -1.12 16 24 C -0.07 -0.17 2.32 71.23 0.17 0.00 16 25 O -0.55 -2.32 12.65 -148.98 -1.89 -4.21 16 26 Si 0.79 0.51 30.40 68.60 2.09 2.60 16 27 H 0.07 -0.70 7.65 -2.39 -0.02 -0.72 16 28 H 0.07 -0.64 7.65 -2.39 -0.02 -0.66 16 29 H 0.13 -1.49 8.14 -2.39 -0.02 -1.51 16 30 H 0.17 -0.69 4.50 -2.91 -0.01 -0.71 16 31 H 0.07 -0.30 7.66 -2.38 -0.02 -0.32 16 32 H 0.08 -0.46 7.66 -2.39 -0.02 -0.47 16 33 H 0.12 -0.44 8.14 -2.39 -0.02 -0.46 16 34 H 0.06 0.14 7.57 -2.38 -0.02 0.12 16 35 H 0.10 -0.04 6.44 -2.39 -0.02 -0.06 16 36 H 0.08 0.23 5.68 -2.39 -0.01 0.21 16 37 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 38 H 0.08 0.06 6.22 -2.39 -0.01 0.05 16 39 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 40 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 41 H 0.39 -3.10 9.08 -74.06 -0.67 -3.78 16 42 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 43 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 44 H 0.08 0.39 7.21 -2.39 -0.02 0.37 16 45 H 0.05 0.39 8.14 -2.38 -0.02 0.37 16 46 H 0.14 1.05 3.46 -2.91 -0.01 1.04 16 47 H 0.09 -0.09 7.82 -2.39 -0.02 -0.11 16 48 H 0.37 -0.03 8.59 -74.06 -0.64 -0.67 16 49 H -0.29 -2.22 6.80 99.48 0.68 -1.55 16 50 H -0.24 -0.06 7.11 99.48 0.71 0.65 16 Total: 0.00 -23.30 386.22 -0.38 -23.68 By element: Atomic # 1 Polarization: -7.26 SS G_CDS: -0.31 Total: -7.57 kcal Atomic # 6 Polarization: 6.48 SS G_CDS: 5.34 Total: 11.81 kcal Atomic # 7 Polarization: -5.41 SS G_CDS: -2.28 Total: -7.69 kcal Atomic # 8 Polarization: -17.62 SS G_CDS: -5.21 Total: -22.83 kcal Atomic # 14 Polarization: 0.51 SS G_CDS: 2.09 Total: 2.60 kcal Total: -23.30 -0.38 -23.68 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.737 kcal (2) G-P(sol) polarization free energy of solvation -23.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.037 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.683 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.420 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds