Wall clock time and date at job start Sun Mar 7 2021 05:38:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.34766 * 120.00188 * 2 1 4 4 O 1.21577 * 120.00380 * 185.70586 * 3 2 1 5 5 C 1.47698 * 120.00016 * 5.70997 * 3 2 1 6 6 C 1.39822 * 120.16508 * 233.83495 * 5 3 2 7 7 F 1.35102 * 120.11292 * 359.97438 * 6 5 3 8 8 C 1.38320 * 119.77971 * 179.79045 * 6 5 3 9 9 C 1.38209 * 120.11630 * 0.48466 * 8 6 5 10 10 C 1.38464 * 120.33469 * 359.74601 * 9 8 6 11 11 C 1.50700 * 119.88504 * 180.02562 * 10 9 8 12 12 O 1.42898 * 109.47016 * 120.02358 * 11 10 9 13 13 Si 1.86293 * 109.47681 * 0.02562 * 11 10 9 14 14 C 1.37853 * 120.22379 * 0.02562 * 10 9 8 15 15 C 1.46500 * 119.99868 * 180.28233 * 2 1 3 16 16 H 1.09004 * 109.47431 * 118.71802 * 15 2 1 17 17 C 1.53002 * 109.47294 * 238.72073 * 15 2 1 18 18 C 1.53001 * 109.46813 * 59.99611 * 17 15 2 19 19 C 1.52999 * 109.47285 * 60.00583 * 18 17 15 20 20 H 1.09004 * 109.47216 * 59.99763 * 19 18 17 21 21 O 1.42897 * 109.47257 * 179.97438 * 19 18 17 22 22 C 1.53000 * 109.46980 * 299.99745 * 19 18 17 23 23 C 1.53001 * 109.46904 * 60.00021 * 22 19 18 24 24 H 1.09002 * 109.46521 * 275.82184 * 1 2 3 25 25 H 1.08998 * 109.47155 * 35.82508 * 1 2 3 26 26 H 1.08997 * 109.47185 * 155.82505 * 1 2 3 27 27 H 1.08004 * 119.94611 * 180.23129 * 8 6 5 28 28 H 1.07995 * 119.83050 * 179.72307 * 9 8 6 29 29 H 1.09009 * 109.46940 * 240.02189 * 11 10 9 30 30 H 0.96693 * 113.99753 * 299.99067 * 12 11 10 31 31 H 1.48503 * 110.00026 * 58.68111 * 13 11 10 32 32 H 1.48496 * 110.00536 * 180.02562 * 13 11 10 33 33 H 1.07997 * 120.06256 * 180.02562 * 14 10 9 34 34 H 1.08994 * 109.47568 * 179.97438 * 17 15 2 35 35 H 1.09002 * 109.46984 * 300.00077 * 17 15 2 36 36 H 1.09000 * 109.46907 * 180.02562 * 18 17 15 37 37 H 1.09004 * 109.47644 * 300.00053 * 18 17 15 38 38 H 0.96697 * 113.99711 * 179.97438 * 21 19 18 39 39 H 1.09002 * 109.47244 * 179.97438 * 22 19 18 40 40 H 1.09004 * 109.47160 * 300.00052 * 22 19 18 41 41 H 1.09002 * 109.46779 * 180.02562 * 23 22 19 42 42 H 1.08994 * 109.47735 * 60.00198 * 23 22 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 3.3501 1.1697 -0.1047 5 6 1.4059 2.4430 0.1273 6 6 1.5895 3.4561 -0.8188 7 9 2.4388 3.2718 -1.8532 8 6 0.8957 4.6462 -0.6943 9 6 0.0315 4.8374 0.3672 10 6 -0.1502 3.8392 1.3095 11 6 -1.0955 4.0583 2.4626 12 8 -2.1284 3.0715 2.4257 13 14 -1.8529 5.7552 2.3312 14 6 0.5305 2.6459 1.1964 15 6 2.1975 -1.2687 -0.0063 16 1 2.8068 -1.3321 -0.9078 17 6 3.1011 -1.3421 1.2262 18 6 2.2458 -1.2531 2.4917 19 6 1.2518 -2.4159 2.5183 20 1 1.7968 -3.3600 2.5137 21 8 0.4534 -2.3332 3.7004 22 6 0.3482 -2.3427 1.2858 23 6 1.2036 -2.4317 0.0203 24 1 -0.3632 0.1042 1.0224 25 1 -0.3633 0.8332 -0.6015 26 1 -0.3633 -0.9375 -0.4208 27 1 1.0326 5.4292 -1.4256 28 1 -0.5044 5.7701 0.4624 29 1 -0.5481 3.9764 3.4017 30 1 -2.6575 3.0861 1.6165 31 1 -2.5754 5.8904 1.0408 32 1 -2.7866 5.9838 3.4630 33 1 0.3865 1.8690 1.9326 34 1 3.6458 -2.2862 1.2219 35 1 3.8093 -0.5136 1.2074 36 1 2.8896 -1.3049 3.3697 37 1 1.7008 -0.3091 2.4964 38 1 -0.2008 -3.0404 3.7835 39 1 -0.3596 -3.1714 1.3044 40 1 -0.1968 -1.3987 1.2904 41 1 0.5598 -2.3790 -0.8577 42 1 1.7485 -3.3756 0.0156 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:38:23 Heat of formation + Delta-G solvation = -109.284986 kcal Electronic energy + Delta-G solvation = -27526.322701 eV Core-core repulsion = 23581.255150 eV Total energy + Delta-G solvation = -3945.067551 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -50.13116 -42.07061 -40.51605 -39.36440 -37.61254 -37.28575 -35.03777 -32.68176 -32.34636 -32.25086 -30.27702 -27.62525 -26.67371 -25.44785 -24.00260 -23.52652 -22.65121 -21.44832 -20.15961 -18.97142 -18.46885 -18.36488 -18.01126 -17.63789 -17.39550 -16.97463 -16.73577 -16.20726 -16.13860 -15.79181 -15.53719 -15.35001 -14.98556 -14.84545 -14.69903 -14.46479 -14.33643 -13.90831 -13.72377 -13.57075 -13.45610 -13.25403 -12.96378 -12.77263 -12.72005 -12.29813 -12.24859 -12.03903 -11.77845 -11.74034 -11.39050 -10.89679 -10.76088 -10.62841 -10.26919 -9.88242 -9.76378 -4.88094 -0.38554 -0.05029 1.28245 1.40009 1.62528 1.77043 2.00623 2.29784 2.99159 3.14261 3.23686 3.39361 3.50610 3.57221 3.64250 3.65305 3.94471 3.95735 4.02910 4.09976 4.11920 4.15707 4.28929 4.37293 4.38829 4.45889 4.47318 4.55686 4.61915 4.70333 4.78707 4.81904 4.85758 4.93958 4.96532 5.02381 5.04677 5.06491 5.13211 5.18344 5.26398 5.51783 5.58594 6.13593 6.52644 6.86865 6.89242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.593 5.593 3 C 0.556 3.444 4 O -0.566 6.566 5 C -0.175 4.175 6 C 0.121 3.879 7 F -0.144 7.144 8 C -0.142 4.142 9 C -0.058 4.058 10 C -0.124 4.124 11 C -0.080 4.080 12 O -0.543 6.543 13 Si 0.765 3.235 14 C -0.031 4.031 15 C 0.145 3.855 16 H 0.069 0.931 17 C -0.130 4.130 18 C -0.105 4.105 19 C 0.107 3.893 20 H 0.061 0.939 21 O -0.588 6.588 22 C -0.174 4.174 23 C -0.117 4.117 24 H 0.074 0.926 25 H 0.069 0.931 26 H 0.107 0.893 27 H 0.170 0.830 28 H 0.170 0.830 29 H 0.126 0.874 30 H 0.389 0.611 31 H -0.269 1.269 32 H -0.305 1.305 33 H 0.141 0.859 34 H 0.088 0.912 35 H 0.058 0.942 36 H 0.056 0.944 37 H 0.052 0.948 38 H 0.394 0.606 39 H 0.088 0.912 40 H 0.094 0.906 41 H 0.091 0.909 42 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.043 0.010 -0.739 6.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.325 5.325 3 C 0.344 3.656 4 O -0.446 6.446 5 C -0.179 4.179 6 C 0.101 3.899 7 F -0.122 7.122 8 C -0.161 4.161 9 C -0.075 4.075 10 C -0.125 4.125 11 C -0.189 4.189 12 O -0.351 6.351 13 Si 0.669 3.331 14 C -0.050 4.050 15 C 0.042 3.958 16 H 0.087 0.913 17 C -0.168 4.168 18 C -0.143 4.143 19 C 0.049 3.951 20 H 0.079 0.921 21 O -0.397 6.397 22 C -0.211 4.211 23 C -0.154 4.154 24 H 0.093 0.907 25 H 0.088 0.912 26 H 0.125 0.875 27 H 0.187 0.813 28 H 0.187 0.813 29 H 0.144 0.856 30 H 0.238 0.762 31 H -0.195 1.195 32 H -0.234 1.234 33 H 0.158 0.842 34 H 0.107 0.893 35 H 0.077 0.923 36 H 0.074 0.926 37 H 0.071 0.929 38 H 0.244 0.756 39 H 0.106 0.894 40 H 0.112 0.888 41 H 0.109 0.891 42 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -5.503 0.781 -0.253 5.564 hybrid contribution -0.316 -1.479 -0.768 1.696 sum -5.819 -0.698 -1.021 5.949 Atomic orbital electron populations 1.22462 0.77849 1.04932 1.02673 1.47860 1.08056 1.04836 1.71784 1.18407 0.86600 0.84376 0.76231 1.90786 1.15409 1.87723 1.50634 1.19961 1.03375 0.94942 0.99608 1.18062 0.91119 0.95234 0.85458 1.91526 1.68672 1.95698 1.56334 1.21366 0.97510 0.95907 1.01275 1.21339 0.95711 0.99059 0.91402 1.20392 0.99685 0.94231 0.98176 1.25232 0.90331 1.04058 0.99235 1.86608 1.47157 1.55611 1.45744 0.94039 0.84199 0.77653 0.77218 1.20976 0.91224 0.97937 0.94817 1.21175 0.93728 0.82860 0.98011 0.91328 1.21835 0.98082 1.03338 0.93579 1.21341 0.97188 0.98337 0.97454 1.21776 0.91284 0.97624 0.84427 0.92135 1.86494 1.53830 1.55972 1.43383 1.22879 0.98951 1.05520 0.93770 1.21792 0.97613 0.97134 0.98875 0.90743 0.91235 0.87476 0.81270 0.81342 0.85644 0.76168 1.19513 1.23360 0.84164 0.89308 0.92303 0.92562 0.92939 0.75633 0.89393 0.88787 0.89110 0.88639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.25 7.07 127.77 0.90 0.65 16 2 N -0.59 -1.50 2.25 -826.16 -1.86 -3.36 16 3 C 0.56 5.14 6.51 86.74 0.56 5.70 16 4 O -0.57 -10.04 15.11 -3.96 -0.06 -10.10 16 5 C -0.17 -0.88 4.54 -20.05 -0.09 -0.97 16 6 C 0.12 0.62 7.27 22.67 0.16 0.78 16 7 F -0.14 -1.56 16.65 44.97 0.75 -0.81 16 8 C -0.14 0.32 10.01 22.28 0.22 0.55 16 9 C -0.06 0.33 8.66 22.32 0.19 0.53 16 10 C -0.12 0.47 5.39 -19.90 -0.11 0.37 16 11 C -0.08 0.40 2.82 71.24 0.20 0.60 16 12 O -0.54 1.46 12.76 -148.98 -1.90 -0.44 16 13 Si 0.76 -4.87 29.78 68.60 2.04 -2.83 16 14 C -0.03 0.00 7.89 22.52 0.18 0.18 16 15 C 0.14 0.21 2.91 44.99 0.13 0.34 16 16 H 0.07 0.28 8.14 -2.38 -0.02 0.26 16 17 C -0.13 -0.50 5.23 30.60 0.16 -0.34 16 18 C -0.11 -0.39 5.41 30.59 0.17 -0.22 16 19 C 0.11 -0.10 3.47 30.59 0.11 0.01 16 20 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 21 O -0.59 -0.78 13.32 -148.98 -1.98 -2.77 16 22 C -0.17 0.97 4.89 30.59 0.15 1.12 16 23 C -0.12 0.63 4.91 30.60 0.15 0.78 16 24 H 0.07 -0.36 5.78 -2.39 -0.01 -0.38 16 25 H 0.07 -0.29 7.12 -2.39 -0.02 -0.31 16 26 H 0.11 -0.85 4.97 -2.39 -0.01 -0.86 16 27 H 0.17 -1.16 8.06 -2.91 -0.02 -1.19 16 28 H 0.17 -1.94 4.86 -2.91 -0.01 -1.95 16 29 H 0.13 -0.68 7.96 -2.38 -0.02 -0.70 16 30 H 0.39 -3.50 8.70 -74.06 -0.64 -4.14 16 31 H -0.27 1.10 7.11 99.48 0.71 1.81 16 32 H -0.31 -0.78 7.11 99.48 0.71 -0.08 16 33 H 0.14 -0.04 7.18 -2.91 -0.02 -0.06 16 34 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 35 H 0.06 0.62 6.28 -2.39 -0.01 0.61 16 36 H 0.06 0.34 8.14 -2.39 -0.02 0.32 16 37 H 0.05 0.32 7.60 -2.38 -0.02 0.30 16 38 H 0.39 -2.76 9.08 -74.06 -0.67 -3.43 16 39 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 40 H 0.09 -0.48 3.69 -2.39 -0.01 -0.49 16 41 H 0.09 -0.71 6.87 -2.39 -0.02 -0.72 16 42 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 Total: 0.00 -22.69 328.08 -0.12 -22.81 By element: Atomic # 1 Polarization: -12.39 SS G_CDS: -0.20 Total: -12.58 kcal Atomic # 6 Polarization: 6.99 SS G_CDS: 3.09 Total: 10.08 kcal Atomic # 7 Polarization: -1.50 SS G_CDS: -1.86 Total: -3.36 kcal Atomic # 8 Polarization: -9.36 SS G_CDS: -3.95 Total: -13.31 kcal Atomic # 9 Polarization: -1.56 SS G_CDS: 0.75 Total: -0.81 kcal Atomic # 14 Polarization: -4.87 SS G_CDS: 2.04 Total: -2.83 kcal Total: -22.69 -0.12 -22.81 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.478 kcal (2) G-P(sol) polarization free energy of solvation -22.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.807 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.285 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds