Wall clock time and date at job start Sun Mar 7 2021 05:38:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.34782 * 120.00379 * 2 1 4 4 O 1.21587 * 120.00023 * 186.83120 * 3 2 1 5 5 C 1.47575 * 119.99402 * 6.83129 * 3 2 1 6 6 C 1.40202 * 119.83662 * 21.12627 * 5 3 2 7 7 C 1.36229 * 120.37986 * 179.97438 * 6 5 3 8 8 C 1.39875 * 119.96307 * 359.97438 * 7 6 5 9 9 C 1.40929 * 120.16125 * 0.02562 * 8 7 6 10 10 C 1.38636 * 119.49577 * 359.76567 * 9 8 7 11 11 N 1.37831 * 107.12529 * 180.02562 * 9 8 7 12 12 C 1.36564 * 109.86173 * 0.02562 * 11 9 8 13 13 C 1.34451 * 109.98533 * 359.97438 * 12 11 9 14 14 C 1.50700 * 126.48634 * 180.02562 * 13 12 11 15 15 O 1.42895 * 109.47524 * 254.97450 * 14 13 12 16 16 Si 1.86309 * 109.46789 * 14.97507 * 14 13 12 17 17 C 1.46500 * 119.99962 * 180.02562 * 2 1 3 18 18 H 1.09001 * 109.47403 * 179.97438 * 17 2 1 19 19 C 1.53002 * 109.47003 * 299.99659 * 17 2 1 20 20 C 1.53003 * 109.47340 * 180.02562 * 19 17 2 21 21 C 1.53005 * 109.46810 * 300.00107 * 20 19 17 22 22 H 1.08992 * 109.46962 * 180.02562 * 21 20 19 23 23 O 1.42901 * 109.46936 * 299.99648 * 21 20 19 24 24 C 1.53002 * 109.47256 * 59.99842 * 21 20 19 25 25 C 1.52999 * 109.47365 * 59.99523 * 17 2 1 26 26 H 1.08995 * 109.46934 * 268.42999 * 1 2 3 27 27 H 1.09003 * 109.47109 * 28.42829 * 1 2 3 28 28 H 1.08997 * 109.47506 * 148.43098 * 1 2 3 29 29 H 1.08002 * 119.80890 * 359.97438 * 6 5 3 30 30 H 1.08007 * 120.01974 * 179.97438 * 7 6 5 31 31 H 1.08004 * 120.16826 * 180.25404 * 10 9 8 32 32 H 0.96996 * 125.07227 * 179.97438 * 11 9 8 33 33 H 1.08003 * 125.01131 * 179.97438 * 12 11 9 34 34 H 1.09002 * 109.47454 * 134.96783 * 14 13 12 35 35 H 0.96701 * 113.99769 * 59.99551 * 15 14 13 36 36 H 1.48497 * 109.99641 * 180.02562 * 16 14 13 37 37 H 1.48504 * 109.99877 * 301.31847 * 16 14 13 38 38 H 1.09002 * 109.46783 * 300.00228 * 19 17 2 39 39 H 1.09001 * 109.47007 * 59.99800 * 19 17 2 40 40 H 1.08995 * 109.47088 * 179.97438 * 20 19 17 41 41 H 1.09003 * 109.46781 * 59.99478 * 20 19 17 42 42 H 0.96693 * 114.00409 * 300.00765 * 23 21 20 43 43 H 1.09001 * 109.47007 * 60.00290 * 24 21 20 44 44 H 1.09002 * 109.46783 * 179.97438 * 24 21 20 45 45 H 1.08999 * 109.46642 * 60.00417 * 25 17 2 46 46 H 1.09001 * 109.47006 * 300.00421 * 25 17 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3483 1.1709 -0.1252 5 6 1.4089 2.4407 0.1520 6 6 0.1300 2.4473 0.7266 7 6 -0.5536 3.6165 0.8727 8 6 0.0209 4.8193 0.4487 9 6 1.3057 4.8250 -0.1302 10 6 1.9962 3.6311 -0.2712 11 7 1.6039 6.1336 -0.4438 12 6 0.5647 6.9446 -0.0867 13 6 -0.4231 6.2129 0.4579 14 6 -1.7390 6.7305 0.9790 15 8 -1.7189 6.7303 2.4078 16 14 -2.0112 8.4673 0.3620 17 6 2.1974 -1.2687 -0.0006 18 1 3.2691 -1.0696 -0.0009 19 6 1.8279 -2.0715 1.2484 20 6 2.5933 -3.3963 1.2482 21 6 2.2242 -4.1984 -0.0014 22 1 2.7691 -5.1423 -0.0013 23 8 0.8193 -4.4600 -0.0017 24 6 2.5938 -3.3956 -1.2504 25 6 1.8278 -2.0706 -1.2501 26 1 -0.3633 -0.0282 1.0272 27 1 -0.3633 0.9038 -0.4892 28 1 -0.3634 -0.8755 -0.5380 29 1 -0.3157 1.5200 1.0552 30 1 -1.5386 3.6148 1.3157 31 1 2.9832 3.6234 -0.7096 32 1 2.4290 6.4340 -0.8558 33 1 0.5399 8.0158 -0.2218 34 1 -2.5469 6.0891 0.6268 35 1 -1.0232 7.2817 2.7914 36 1 -3.3054 8.9894 0.8695 37 1 -0.8997 9.3450 0.8087 38 1 2.0912 -1.5003 2.1386 39 1 0.7562 -2.2707 1.2483 40 1 2.3303 -3.9680 2.1382 41 1 3.6649 -3.1967 1.2484 42 1 0.5133 -4.9663 0.7631 43 1 3.6654 -3.1961 -1.2501 44 1 2.3312 -3.9672 -2.1405 45 1 2.0911 -1.4986 -2.1398 46 1 0.7561 -2.2697 -1.2501 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:38:32 Heat of formation + Delta-G solvation = -33.657464 kcal Electronic energy + Delta-G solvation = -28652.448994 eV Core-core repulsion = 24702.699064 eV Total energy + Delta-G solvation = -3949.749931 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.49106 -41.34627 -39.76817 -37.96081 -37.52450 -37.03209 -34.91988 -33.23061 -31.85006 -31.23621 -30.73483 -29.44100 -28.05098 -26.48566 -24.93947 -23.78279 -23.47478 -22.78704 -20.95601 -20.71679 -20.25606 -19.25377 -18.46345 -17.78111 -17.61526 -17.29520 -16.78636 -16.71446 -16.25804 -16.07287 -15.79117 -15.62484 -15.46155 -15.15110 -14.83805 -14.70726 -14.50345 -14.35110 -14.11058 -14.02507 -13.83815 -13.58259 -13.34264 -13.22485 -13.01931 -12.68732 -12.46885 -12.37815 -12.33568 -12.09995 -11.91448 -11.72929 -11.38822 -11.24546 -10.86971 -10.71825 -10.65209 -10.47026 -9.59189 -9.26872 -8.76667 -4.97120 -0.19547 0.46314 1.29541 1.39243 1.54842 1.83908 1.95012 2.03965 2.15474 2.94052 3.27202 3.48005 3.50394 3.66822 3.70407 3.75191 3.78722 3.87936 3.95296 4.03089 4.09263 4.18724 4.26014 4.34561 4.35586 4.45217 4.48242 4.50032 4.50767 4.56890 4.60803 4.65947 4.73965 4.79541 4.89084 4.93045 5.01842 5.03302 5.12743 5.15755 5.27603 5.30136 5.41271 5.48916 5.50668 5.65812 5.66968 6.04348 6.38588 6.42439 6.50374 6.68561 7.24948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.605 5.605 3 C 0.564 3.436 4 O -0.539 6.539 5 C -0.119 4.119 6 C -0.135 4.135 7 C -0.075 4.075 8 C -0.063 4.063 9 C 0.081 3.919 10 C -0.059 4.059 11 N -0.584 5.584 12 C 0.073 3.927 13 C -0.207 4.207 14 C -0.037 4.037 15 O -0.531 6.531 16 Si 0.684 3.316 17 C 0.141 3.859 18 H 0.100 0.900 19 C -0.123 4.123 20 C -0.150 4.150 21 C 0.103 3.897 22 H 0.057 0.943 23 O -0.563 6.563 24 C -0.110 4.110 25 C -0.124 4.124 26 H 0.063 0.937 27 H 0.088 0.912 28 H 0.075 0.925 29 H 0.151 0.849 30 H 0.130 0.870 31 H 0.133 0.867 32 H 0.421 0.579 33 H 0.175 0.825 34 H 0.115 0.885 35 H 0.374 0.626 36 H -0.256 1.256 37 H -0.260 1.260 38 H 0.064 0.936 39 H 0.074 0.926 40 H 0.070 0.930 41 H 0.075 0.925 42 H 0.377 0.623 43 H 0.078 0.922 44 H 0.074 0.926 45 H 0.065 0.935 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.698 0.151 -1.568 2.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.337 5.337 3 C 0.354 3.646 4 O -0.417 6.417 5 C -0.123 4.123 6 C -0.154 4.154 7 C -0.094 4.094 8 C -0.068 4.068 9 C -0.025 4.025 10 C -0.081 4.081 11 N -0.187 5.187 12 C -0.056 4.056 13 C -0.215 4.215 14 C -0.148 4.148 15 O -0.337 6.337 16 Si 0.585 3.415 17 C 0.038 3.962 18 H 0.118 0.882 19 C -0.161 4.161 20 C -0.188 4.188 21 C 0.044 3.956 22 H 0.075 0.925 23 O -0.369 6.369 24 C -0.148 4.148 25 C -0.162 4.162 26 H 0.082 0.918 27 H 0.106 0.894 28 H 0.094 0.906 29 H 0.168 0.832 30 H 0.148 0.852 31 H 0.151 0.849 32 H 0.259 0.741 33 H 0.192 0.808 34 H 0.133 0.867 35 H 0.221 0.779 36 H -0.181 1.181 37 H -0.185 1.185 38 H 0.083 0.917 39 H 0.092 0.908 40 H 0.088 0.912 41 H 0.093 0.907 42 H 0.224 0.776 43 H 0.096 0.904 44 H 0.093 0.907 45 H 0.084 0.916 46 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -1.541 0.988 -2.127 2.806 hybrid contribution 0.988 -0.197 1.464 1.777 sum -0.553 0.791 -0.663 1.171 Atomic orbital electron populations 1.22433 0.79697 1.04137 1.01617 1.47693 1.07038 1.05525 1.73447 1.18271 0.86852 0.83527 0.75995 1.90776 1.14029 1.87143 1.49788 1.19394 0.95694 0.92395 1.04810 1.21696 0.93813 0.99682 1.00242 1.20252 1.00171 0.90094 0.98881 1.19193 0.93425 0.93322 1.00881 1.18063 0.96035 0.85217 1.03225 1.20041 0.99396 0.88468 1.00146 1.41713 1.17874 1.04889 1.54184 1.21804 0.87613 0.96476 0.99681 1.20665 0.98389 0.92020 1.10395 1.24288 0.95777 1.11444 0.83266 1.86608 1.57615 1.71193 1.18260 0.95192 0.80543 0.74263 0.91492 1.21143 0.97966 0.82036 0.95022 0.88205 1.21777 1.01436 0.95435 0.97462 1.22224 1.01357 0.96725 0.98542 1.21801 0.82140 0.96787 0.94859 0.92502 1.86512 1.23158 1.77730 1.49513 1.21524 1.00322 0.95601 0.97355 1.21794 1.01757 0.95338 0.97311 0.91843 0.89358 0.90625 0.83233 0.85231 0.84948 0.74099 0.80771 0.86732 0.77897 1.18088 1.18536 0.91703 0.90768 0.91176 0.90677 0.77624 0.90363 0.90747 0.91621 0.90480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.08 7.71 59.84 0.46 0.38 16 2 N -0.61 -0.91 2.76 -175.15 -0.48 -1.39 16 3 C 0.56 2.28 7.50 -12.45 -0.09 2.19 16 4 O -0.54 -3.99 15.85 5.29 0.08 -3.90 16 5 C -0.12 -0.33 5.55 -104.95 -0.58 -0.91 16 6 C -0.14 -0.13 7.54 -39.57 -0.30 -0.42 16 7 C -0.08 -0.10 10.03 -39.69 -0.40 -0.50 16 8 C -0.06 -0.12 6.35 -105.04 -0.67 -0.79 16 9 C 0.08 0.14 7.26 -84.00 -0.61 -0.47 16 10 C -0.06 -0.15 9.60 -39.03 -0.37 -0.53 16 11 N -0.58 0.52 6.07 -10.68 -0.06 0.45 16 12 C 0.07 -0.10 10.43 -16.78 -0.17 -0.28 16 13 C -0.21 -0.06 5.57 -102.74 -0.57 -0.63 16 14 C -0.04 0.01 3.06 36.01 0.11 0.12 16 15 O -0.53 -0.71 12.88 -35.23 -0.45 -1.17 16 16 Si 0.68 -1.20 30.82 -169.99 -5.24 -6.44 16 17 C 0.14 0.17 2.52 -67.93 -0.17 0.00 16 18 H 0.10 0.32 6.92 -51.93 -0.36 -0.04 16 19 C -0.12 0.02 5.06 -26.73 -0.14 -0.11 16 20 C -0.15 0.19 5.64 -26.73 -0.15 0.04 16 21 C 0.10 -0.09 3.77 -26.73 -0.10 -0.19 16 22 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 23 O -0.56 0.22 11.97 -35.23 -0.42 -0.20 16 24 C -0.11 0.02 5.67 -26.71 -0.15 -0.13 16 25 C -0.12 -0.07 5.04 -26.71 -0.13 -0.21 16 26 H 0.06 -0.16 6.83 -51.93 -0.35 -0.52 16 27 H 0.09 -0.14 5.46 -51.93 -0.28 -0.42 16 28 H 0.08 -0.14 6.43 -51.93 -0.33 -0.47 16 29 H 0.15 -0.18 3.99 -52.49 -0.21 -0.39 16 30 H 0.13 0.01 8.06 -52.48 -0.42 -0.42 16 31 H 0.13 0.32 7.77 -52.48 -0.41 -0.09 16 32 H 0.42 -1.50 8.96 -40.82 -0.37 -1.86 16 33 H 0.18 -0.72 6.27 -52.48 -0.33 -1.05 16 34 H 0.11 -0.09 7.96 -51.93 -0.41 -0.50 16 35 H 0.37 -0.53 8.70 45.56 0.40 -0.13 16 36 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 37 H -0.26 0.11 7.00 56.52 0.40 0.50 16 38 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 39 H 0.07 -0.03 7.21 -51.93 -0.37 -0.41 16 40 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.38 -1.43 9.08 45.56 0.41 -1.02 16 43 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 44 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 45 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 46 H 0.08 0.07 6.21 -51.93 -0.32 -0.26 16 LS Contribution 359.59 15.07 5.42 5.42 Total: 0.00 -9.25 359.59 -10.73 -19.99 By element: Atomic # 1 Polarization: -4.80 SS G_CDS: -5.53 Total: -10.33 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -4.04 Total: -2.43 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: -0.55 Total: -0.94 kcal Atomic # 8 Polarization: -4.48 SS G_CDS: -0.79 Total: -5.27 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.24 Total: -6.44 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -9.25 -10.73 -19.99 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.671 kcal (2) G-P(sol) polarization free energy of solvation -9.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.924 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.987 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.657 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds