Wall clock time and date at job start Sun Mar 7 2021 05:38:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.34782 * 120.00379 * 2 1 4 4 O 1.21587 * 120.00023 * 186.83120 * 3 2 1 5 5 C 1.47575 * 119.99402 * 6.83129 * 3 2 1 6 6 C 1.40202 * 119.83662 * 21.12627 * 5 3 2 7 7 C 1.36229 * 120.37986 * 179.97438 * 6 5 3 8 8 C 1.39875 * 119.96307 * 359.97438 * 7 6 5 9 9 C 1.40929 * 120.16125 * 0.02562 * 8 7 6 10 10 C 1.38636 * 119.49577 * 359.76567 * 9 8 7 11 11 N 1.37831 * 107.12529 * 180.02562 * 9 8 7 12 12 C 1.36564 * 109.86173 * 0.02562 * 11 9 8 13 13 C 1.34451 * 109.98533 * 359.97438 * 12 11 9 14 14 C 1.50700 * 126.48634 * 180.02562 * 13 12 11 15 15 O 1.42895 * 109.47524 * 254.97450 * 14 13 12 16 16 Si 1.86309 * 109.46789 * 14.97507 * 14 13 12 17 17 C 1.46500 * 119.99962 * 180.02562 * 2 1 3 18 18 H 1.09001 * 109.47403 * 179.97438 * 17 2 1 19 19 C 1.53002 * 109.47003 * 299.99659 * 17 2 1 20 20 C 1.53003 * 109.47340 * 180.02562 * 19 17 2 21 21 C 1.53005 * 109.46810 * 300.00107 * 20 19 17 22 22 H 1.08992 * 109.46962 * 180.02562 * 21 20 19 23 23 O 1.42901 * 109.46936 * 299.99648 * 21 20 19 24 24 C 1.53002 * 109.47256 * 59.99842 * 21 20 19 25 25 C 1.52999 * 109.47365 * 59.99523 * 17 2 1 26 26 H 1.08995 * 109.46934 * 268.42999 * 1 2 3 27 27 H 1.09003 * 109.47109 * 28.42829 * 1 2 3 28 28 H 1.08997 * 109.47506 * 148.43098 * 1 2 3 29 29 H 1.08002 * 119.80890 * 359.97438 * 6 5 3 30 30 H 1.08007 * 120.01974 * 179.97438 * 7 6 5 31 31 H 1.08004 * 120.16826 * 180.25404 * 10 9 8 32 32 H 0.96996 * 125.07227 * 179.97438 * 11 9 8 33 33 H 1.08003 * 125.01131 * 179.97438 * 12 11 9 34 34 H 1.09002 * 109.47454 * 134.96783 * 14 13 12 35 35 H 0.96701 * 113.99769 * 59.99551 * 15 14 13 36 36 H 1.48497 * 109.99641 * 180.02562 * 16 14 13 37 37 H 1.48504 * 109.99877 * 301.31847 * 16 14 13 38 38 H 1.09002 * 109.46783 * 300.00228 * 19 17 2 39 39 H 1.09001 * 109.47007 * 59.99800 * 19 17 2 40 40 H 1.08995 * 109.47088 * 179.97438 * 20 19 17 41 41 H 1.09003 * 109.46781 * 59.99478 * 20 19 17 42 42 H 0.96693 * 114.00409 * 300.00765 * 23 21 20 43 43 H 1.09001 * 109.47007 * 60.00290 * 24 21 20 44 44 H 1.09002 * 109.46783 * 179.97438 * 24 21 20 45 45 H 1.08999 * 109.46642 * 60.00417 * 25 17 2 46 46 H 1.09001 * 109.47006 * 300.00421 * 25 17 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3483 1.1709 -0.1252 5 6 1.4089 2.4407 0.1520 6 6 0.1300 2.4473 0.7266 7 6 -0.5536 3.6165 0.8727 8 6 0.0209 4.8193 0.4487 9 6 1.3057 4.8250 -0.1302 10 6 1.9962 3.6311 -0.2712 11 7 1.6039 6.1336 -0.4438 12 6 0.5647 6.9446 -0.0867 13 6 -0.4231 6.2129 0.4579 14 6 -1.7390 6.7305 0.9790 15 8 -1.7189 6.7303 2.4078 16 14 -2.0112 8.4673 0.3620 17 6 2.1974 -1.2687 -0.0006 18 1 3.2691 -1.0696 -0.0009 19 6 1.8279 -2.0715 1.2484 20 6 2.5933 -3.3963 1.2482 21 6 2.2242 -4.1984 -0.0014 22 1 2.7691 -5.1423 -0.0013 23 8 0.8193 -4.4600 -0.0017 24 6 2.5938 -3.3956 -1.2504 25 6 1.8278 -2.0706 -1.2501 26 1 -0.3633 -0.0282 1.0272 27 1 -0.3633 0.9038 -0.4892 28 1 -0.3634 -0.8755 -0.5380 29 1 -0.3157 1.5200 1.0552 30 1 -1.5386 3.6148 1.3157 31 1 2.9832 3.6234 -0.7096 32 1 2.4290 6.4340 -0.8558 33 1 0.5399 8.0158 -0.2218 34 1 -2.5469 6.0891 0.6268 35 1 -1.0232 7.2817 2.7914 36 1 -3.3054 8.9894 0.8695 37 1 -0.8997 9.3450 0.8087 38 1 2.0912 -1.5003 2.1386 39 1 0.7562 -2.2707 1.2483 40 1 2.3303 -3.9680 2.1382 41 1 3.6649 -3.1967 1.2484 42 1 0.5133 -4.9663 0.7631 43 1 3.6654 -3.1961 -1.2501 44 1 2.3312 -3.9672 -2.1405 45 1 2.0911 -1.4986 -2.1398 46 1 0.7561 -2.2697 -1.2501 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:38:31 Heat of formation + Delta-G solvation = -34.901145 kcal Electronic energy + Delta-G solvation = -28652.502925 eV Core-core repulsion = 24702.699064 eV Total energy + Delta-G solvation = -3949.803861 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.52269 -41.47674 -39.81281 -38.01386 -37.59585 -37.13633 -34.94385 -33.26716 -31.85031 -31.27180 -30.79116 -29.46705 -28.10144 -26.45609 -25.00718 -23.78818 -23.53227 -22.82183 -21.01407 -20.70910 -20.34210 -19.28255 -18.50738 -17.81500 -17.65843 -17.32079 -16.86317 -16.75433 -16.34437 -16.11129 -15.76263 -15.61657 -15.51375 -15.15712 -14.92860 -14.74538 -14.54208 -14.44181 -14.15079 -14.03345 -13.88303 -13.58451 -13.32926 -13.22573 -13.03290 -12.73352 -12.49431 -12.43978 -12.36059 -12.08239 -11.93805 -11.73278 -11.44718 -11.28595 -11.00036 -10.78485 -10.68061 -10.44274 -9.73580 -9.33090 -8.78521 -4.82958 -0.31377 0.38661 1.37624 1.40552 1.64926 1.75586 1.85006 2.04939 2.17286 2.81979 3.39328 3.40177 3.56208 3.67094 3.69455 3.74476 3.83950 3.91698 3.96370 4.04459 4.08236 4.19576 4.22509 4.32902 4.37284 4.44340 4.48410 4.49529 4.53739 4.58264 4.60136 4.66057 4.77915 4.82429 4.92348 4.97561 4.97905 5.03216 5.11217 5.15161 5.21700 5.26483 5.36960 5.42929 5.45859 5.58585 5.62779 5.99123 6.26296 6.51444 6.62350 6.94292 7.01046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.600 5.600 3 C 0.557 3.443 4 O -0.586 6.586 5 C -0.135 4.135 6 C -0.129 4.129 7 C -0.084 4.084 8 C -0.079 4.079 9 C 0.067 3.933 10 C -0.070 4.070 11 N -0.578 5.578 12 C 0.089 3.911 13 C -0.224 4.224 14 C -0.049 4.049 15 O -0.554 6.554 16 Si 0.775 3.225 17 C 0.140 3.860 18 H 0.074 0.926 19 C -0.115 4.115 20 C -0.147 4.147 21 C 0.107 3.893 22 H 0.067 0.933 23 O -0.577 6.577 24 C -0.113 4.113 25 C -0.116 4.116 26 H 0.083 0.917 27 H 0.092 0.908 28 H 0.085 0.915 29 H 0.170 0.830 30 H 0.141 0.859 31 H 0.124 0.876 32 H 0.433 0.567 33 H 0.207 0.793 34 H 0.115 0.885 35 H 0.383 0.617 36 H -0.308 1.308 37 H -0.270 1.270 38 H 0.056 0.944 39 H 0.082 0.918 40 H 0.085 0.915 41 H 0.070 0.930 42 H 0.392 0.608 43 H 0.079 0.921 44 H 0.073 0.927 45 H 0.052 0.948 46 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.663 0.387 -1.424 3.045 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.330 5.330 3 C 0.348 3.652 4 O -0.468 6.468 5 C -0.139 4.139 6 C -0.148 4.148 7 C -0.102 4.102 8 C -0.084 4.084 9 C -0.040 4.040 10 C -0.091 4.091 11 N -0.181 5.181 12 C -0.040 4.040 13 C -0.231 4.231 14 C -0.157 4.157 15 O -0.361 6.361 16 Si 0.679 3.321 17 C 0.037 3.963 18 H 0.093 0.907 19 C -0.154 4.154 20 C -0.185 4.185 21 C 0.048 3.952 22 H 0.085 0.915 23 O -0.385 6.385 24 C -0.151 4.151 25 C -0.154 4.154 26 H 0.101 0.899 27 H 0.111 0.889 28 H 0.104 0.896 29 H 0.187 0.813 30 H 0.159 0.841 31 H 0.142 0.858 32 H 0.274 0.726 33 H 0.224 0.776 34 H 0.132 0.868 35 H 0.232 0.768 36 H -0.237 1.237 37 H -0.196 1.196 38 H 0.075 0.925 39 H 0.101 0.899 40 H 0.104 0.896 41 H 0.089 0.911 42 H 0.241 0.759 43 H 0.097 0.903 44 H 0.091 0.909 45 H 0.070 0.930 46 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -2.506 1.182 -1.986 3.409 hybrid contribution 1.230 -0.249 1.433 1.905 sum -1.276 0.933 -0.553 1.674 Atomic orbital electron populations 1.22635 0.77805 1.04845 1.03034 1.47800 1.08234 1.04953 1.72045 1.18578 0.86463 0.84587 0.75576 1.90737 1.15897 1.87821 1.52321 1.19415 0.96560 0.91815 1.06144 1.21855 0.92926 1.00526 0.99447 1.20454 1.00694 0.90094 0.98987 1.19577 0.93665 0.94452 1.00752 1.18087 0.96173 0.85897 1.03808 1.20078 0.99298 0.89189 1.00558 1.41795 1.18580 1.04047 1.53679 1.22288 0.86503 0.97598 0.97590 1.20760 0.99248 0.91436 1.11693 1.24578 0.95576 1.13016 0.82567 1.86572 1.58291 1.71894 1.19383 0.94158 0.76664 0.71354 0.89932 1.21151 0.96676 0.82196 0.96274 0.90748 1.21714 1.02030 0.95597 0.96034 1.22213 1.00946 0.96182 0.99171 1.21748 0.82245 0.96994 0.94217 0.91512 1.86473 1.23208 1.78177 1.50689 1.21560 1.00345 0.95217 0.98021 1.21704 1.01856 0.95506 0.96323 0.89935 0.88944 0.89645 0.81314 0.84136 0.85775 0.72650 0.77635 0.86757 0.76789 1.23659 1.19568 0.92547 0.89928 0.89621 0.91093 0.75892 0.90258 0.90878 0.92956 0.90306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.16 7.71 127.77 0.98 0.83 16 2 N -0.60 -2.56 2.76 -826.31 -2.28 -4.84 16 3 C 0.56 5.77 7.50 86.71 0.65 6.42 16 4 O -0.59 -10.60 15.85 -3.99 -0.06 -10.66 16 5 C -0.14 -0.97 5.55 -20.08 -0.11 -1.08 16 6 C -0.13 -0.31 7.54 22.28 0.17 -0.14 16 7 C -0.08 -0.24 10.03 22.20 0.22 -0.02 16 8 C -0.08 -0.33 6.35 -20.14 -0.13 -0.46 16 9 C 0.07 0.28 7.26 38.95 0.28 0.56 16 10 C -0.07 -0.50 9.60 22.63 0.22 -0.28 16 11 N -0.58 1.29 6.07 -187.72 -1.14 0.15 16 12 C 0.09 -0.37 10.43 83.09 0.87 0.50 16 13 C -0.22 0.02 5.57 -18.64 -0.10 -0.08 16 14 C -0.05 0.06 3.06 71.24 0.22 0.28 16 15 O -0.55 -1.45 12.88 -148.98 -1.92 -3.37 16 16 Si 0.77 -3.51 30.82 68.60 2.11 -1.39 16 17 C 0.14 0.54 2.52 44.99 0.11 0.65 16 18 H 0.07 0.69 6.92 -2.39 -0.02 0.67 16 19 C -0.12 0.02 5.06 30.60 0.15 0.17 16 20 C -0.15 0.40 5.64 30.60 0.17 0.57 16 21 C 0.11 -0.24 3.77 30.60 0.12 -0.12 16 22 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 23 O -0.58 1.01 11.97 -148.98 -1.78 -0.77 16 24 C -0.11 -0.02 5.67 30.61 0.17 0.15 16 25 C -0.12 -0.25 5.04 30.61 0.15 -0.10 16 26 H 0.08 -0.51 6.83 -2.39 -0.02 -0.53 16 27 H 0.09 -0.29 5.46 -2.39 -0.01 -0.30 16 28 H 0.09 -0.36 6.43 -2.39 -0.02 -0.38 16 29 H 0.17 -0.46 3.99 -2.91 -0.01 -0.47 16 30 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 31 H 0.12 0.96 7.77 -2.91 -0.02 0.94 16 32 H 0.43 -3.30 8.96 -92.71 -0.83 -4.13 16 33 H 0.21 -2.27 6.27 -2.91 -0.02 -2.29 16 34 H 0.11 -0.20 7.96 -2.39 -0.02 -0.21 16 35 H 0.38 -1.16 8.70 -74.06 -0.64 -1.80 16 36 H -0.31 -1.33 7.11 99.48 0.71 -0.63 16 37 H -0.27 0.79 7.00 99.48 0.70 1.49 16 38 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 39 H 0.08 -0.14 7.21 -2.39 -0.02 -0.15 16 40 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 41 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 42 H 0.39 -3.50 9.08 -74.06 -0.67 -4.17 16 43 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 44 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 45 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 46 H 0.08 0.15 6.21 -2.39 -0.01 0.14 16 Total: 0.00 -23.53 359.59 -1.99 -25.52 By element: Atomic # 1 Polarization: -11.40 SS G_CDS: -1.07 Total: -12.47 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: 4.15 Total: 7.84 kcal Atomic # 7 Polarization: -1.27 SS G_CDS: -3.42 Total: -4.69 kcal Atomic # 8 Polarization: -11.04 SS G_CDS: -3.77 Total: -14.80 kcal Atomic # 14 Polarization: -3.51 SS G_CDS: 2.11 Total: -1.39 kcal Total: -23.53 -1.99 -25.52 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.384 kcal (2) G-P(sol) polarization free energy of solvation -23.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.991 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.517 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds