Wall clock time and date at job start Sun Mar 7 2021 05:38:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.34776 * 119.99804 * 2 1 4 4 O 1.21555 * 119.99625 * 183.14213 * 3 2 1 5 5 C 1.47844 * 120.00087 * 3.41375 * 3 2 1 6 6 C 1.39549 * 120.14234 * 319.88818 * 5 3 2 7 7 C 1.38066 * 119.84376 * 180.02562 * 6 5 3 8 8 Br 1.89099 * 119.93771 * 180.02562 * 7 6 5 9 9 C 1.38423 * 120.12333 * 0.02562 * 7 6 5 10 10 C 1.38358 * 120.28639 * 359.97438 * 9 7 6 11 11 C 1.50702 * 119.92577 * 180.02562 * 10 9 7 12 12 O 1.42897 * 109.47007 * 119.99841 * 11 10 9 13 13 Si 1.86303 * 109.46695 * 0.02562 * 11 10 9 14 14 C 1.37944 * 120.15357 * 359.71804 * 10 9 7 15 15 C 1.46494 * 119.99781 * 179.97438 * 2 1 3 16 16 H 1.09003 * 109.46931 * 243.10968 * 15 2 1 17 17 C 1.53002 * 109.47447 * 3.10801 * 15 2 1 18 18 C 1.53003 * 109.46968 * 59.99993 * 17 15 2 19 19 C 1.53001 * 109.47167 * 59.99957 * 18 17 15 20 20 H 1.09000 * 109.46617 * 59.99964 * 19 18 17 21 21 O 1.42902 * 109.47048 * 179.97438 * 19 18 17 22 22 C 1.52999 * 109.46937 * 300.00123 * 19 18 17 23 23 C 1.52996 * 109.47527 * 60.00093 * 22 19 18 24 24 H 1.09006 * 109.46835 * 84.44227 * 1 2 3 25 25 H 1.08998 * 109.47219 * 204.44327 * 1 2 3 26 26 H 1.08997 * 109.47399 * 324.44499 * 1 2 3 27 27 H 1.08000 * 120.07390 * 0.02562 * 6 5 3 28 28 H 1.08009 * 119.85676 * 179.97438 * 9 7 6 29 29 H 1.09002 * 109.47104 * 240.00661 * 11 10 9 30 30 H 0.96694 * 114.00039 * 299.99669 * 12 11 10 31 31 H 1.48504 * 109.99686 * 180.02562 * 13 11 10 32 32 H 1.48502 * 110.00043 * 301.31708 * 13 11 10 33 33 H 1.07997 * 120.06491 * 180.29682 * 14 10 9 34 34 H 1.08998 * 109.47233 * 179.97438 * 17 15 2 35 35 H 1.09000 * 109.46816 * 300.00152 * 17 15 2 36 36 H 1.08997 * 109.47000 * 180.02562 * 18 17 15 37 37 H 1.08998 * 109.47038 * 299.99990 * 18 17 15 38 38 H 0.96703 * 113.99394 * 180.02562 * 21 19 18 39 39 H 1.09009 * 109.47075 * 179.97438 * 22 19 18 40 40 H 1.09000 * 109.47338 * 299.99400 * 22 19 18 41 41 H 1.08997 * 109.47234 * 179.97438 * 23 22 19 42 42 H 1.09010 * 109.47333 * 59.99470 * 23 22 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3531 1.1680 -0.0577 5 6 1.4016 2.4464 0.0762 6 6 0.2135 2.6140 -0.6363 7 6 -0.4697 3.8114 -0.5610 8 35 -2.0804 4.0411 -1.5249 9 6 0.0221 4.8441 0.2186 10 6 1.1995 4.6836 0.9272 11 6 1.7273 5.8130 1.7740 12 8 1.8153 5.3870 3.1351 13 14 0.5735 7.2709 1.6535 14 6 1.8883 3.4900 0.8655 15 6 2.1975 -1.2687 0.0006 16 1 2.7816 -1.3505 0.9172 17 6 1.2051 -2.4306 -0.0771 18 6 0.3850 -2.3157 -1.3637 19 6 1.3224 -2.3640 -2.5720 20 1 1.8674 -3.3079 -2.5715 21 8 0.5564 -2.2573 -3.7737 22 6 2.3148 -1.2021 -2.4942 23 6 3.1348 -1.3169 -1.2077 24 1 -0.3633 0.0995 -1.0229 25 1 -0.3633 -0.9355 0.4252 26 1 -0.3634 0.8360 0.5975 27 1 -0.1706 1.8089 -1.2451 28 1 -0.5157 5.7791 0.2740 29 1 2.7165 6.1019 1.4188 30 1 0.9699 5.1147 3.5174 31 1 1.0831 8.3918 2.4838 32 1 0.4480 7.7037 0.2386 33 1 2.8047 3.3647 1.4230 34 1 1.7501 -3.3746 -0.0772 35 1 0.5373 -2.3962 0.7837 36 1 -0.3223 -3.1432 -1.4188 37 1 -0.1600 -1.3718 -1.3641 38 1 1.0871 -2.2811 -4.5817 39 1 2.9829 -1.2367 -3.3548 40 1 1.7698 -0.2581 -2.4947 41 1 3.8421 -0.4894 -1.1526 42 1 3.6799 -2.2610 -1.2072 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:38:52 Heat of formation + Delta-G solvation = -55.936310 kcal Electronic energy + Delta-G solvation = -26651.435968 eV Core-core repulsion = 22838.317762 eV Total energy + Delta-G solvation = -3813.118206 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.061 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.20257 -40.69446 -39.29919 -37.72077 -37.31716 -35.11311 -33.63378 -32.91038 -32.24935 -30.48755 -30.25305 -27.79547 -26.96475 -25.37124 -23.82399 -23.00734 -22.72298 -21.45084 -20.11639 -18.68008 -18.20951 -17.92744 -17.83779 -17.26165 -17.11518 -16.78848 -16.27231 -15.88039 -15.63300 -15.51831 -15.04766 -14.93089 -14.63331 -14.49663 -14.40403 -14.07456 -13.95010 -13.88890 -13.41058 -13.16757 -13.06606 -12.82259 -12.63104 -12.31358 -12.16482 -12.01424 -11.97258 -11.92176 -11.70583 -11.43021 -11.25091 -11.05741 -10.63876 -10.48039 -10.19665 -9.93690 -9.72303 -5.06565 -0.43903 -0.17683 0.42594 1.20574 1.44050 1.58882 1.77986 1.93156 2.32035 3.15926 3.22792 3.28183 3.51005 3.64194 3.66324 3.73264 3.87271 3.92431 3.99605 4.03049 4.10416 4.22801 4.23603 4.25685 4.32536 4.38528 4.43332 4.47435 4.52108 4.59347 4.72437 4.78028 4.89550 4.91139 4.99262 5.05080 5.07309 5.08463 5.10611 5.22320 5.31966 5.36365 5.55996 6.18406 6.71044 6.81459 6.93962 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.592 5.592 3 C 0.557 3.443 4 O -0.565 6.565 5 C -0.130 4.130 6 C -0.055 4.055 7 C -0.096 4.096 8 Br -0.029 7.029 9 C -0.065 4.065 10 C -0.113 4.113 11 C -0.073 4.073 12 O -0.551 6.551 13 Si 0.773 3.227 14 C -0.034 4.034 15 C 0.147 3.853 16 H 0.074 0.926 17 C -0.116 4.116 18 C -0.139 4.139 19 C 0.106 3.894 20 H 0.060 0.940 21 O -0.586 6.586 22 C -0.139 4.139 23 C -0.137 4.137 24 H 0.074 0.926 25 H 0.107 0.893 26 H 0.080 0.920 27 H 0.158 0.842 28 H 0.156 0.844 29 H 0.111 0.889 30 H 0.397 0.603 31 H -0.293 1.293 32 H -0.279 1.279 33 H 0.129 0.871 34 H 0.094 0.906 35 H 0.097 0.903 36 H 0.076 0.924 37 H 0.092 0.908 38 H 0.391 0.609 39 H 0.063 0.937 40 H 0.051 0.949 41 H 0.065 0.935 42 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.733 -2.749 1.592 6.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 N -0.324 5.324 3 C 0.346 3.654 4 O -0.445 6.445 5 C -0.134 4.134 6 C -0.075 4.075 7 C -0.176 4.176 8 Br 0.057 6.943 9 C -0.085 4.085 10 C -0.114 4.114 11 C -0.183 4.183 12 O -0.359 6.359 13 Si 0.678 3.322 14 C -0.053 4.053 15 C 0.044 3.956 16 H 0.092 0.908 17 C -0.153 4.153 18 C -0.176 4.176 19 C 0.047 3.953 20 H 0.078 0.922 21 O -0.394 6.394 22 C -0.177 4.177 23 C -0.175 4.175 24 H 0.092 0.908 25 H 0.125 0.875 26 H 0.099 0.901 27 H 0.175 0.825 28 H 0.173 0.827 29 H 0.129 0.871 30 H 0.248 0.752 31 H -0.220 1.220 32 H -0.206 1.206 33 H 0.147 0.853 34 H 0.113 0.887 35 H 0.115 0.885 36 H 0.095 0.905 37 H 0.110 0.890 38 H 0.240 0.760 39 H 0.081 0.919 40 H 0.070 0.930 41 H 0.083 0.917 42 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -5.687 -1.721 1.306 6.084 hybrid contribution 1.832 -0.242 -0.603 1.943 sum -3.856 -1.963 0.704 4.383 Atomic orbital electron populations 1.22732 0.78138 1.05641 1.02456 1.47833 1.07944 1.04989 1.71628 1.18416 0.86604 0.84148 0.76254 1.90758 1.14992 1.87590 1.51203 1.19854 0.96561 0.94962 1.02006 1.21680 0.92061 0.96870 0.96881 1.21724 0.96466 0.96923 1.02461 1.96853 1.27022 1.97625 1.72821 1.21347 0.94661 0.98445 0.94008 1.20315 0.95226 0.96221 0.99649 1.25222 1.07897 1.02057 0.83114 1.86504 1.38385 1.87785 1.23272 0.93861 0.85061 0.74337 0.78958 1.21145 0.98368 0.91089 0.94734 1.21185 0.93386 0.82609 0.98382 0.90803 1.21815 0.97915 0.97406 0.98199 1.22097 0.98293 1.05070 0.92125 1.21855 0.91650 0.96420 0.85370 0.92198 1.86465 1.39164 1.96938 1.16801 1.22103 0.98222 0.99350 0.98025 1.21918 0.98403 1.03402 0.93823 0.90773 0.87474 0.90117 0.82504 0.82668 0.87115 0.75233 1.22014 1.20608 0.85321 0.88713 0.88497 0.90537 0.88987 0.75996 0.91855 0.93014 0.91665 0.89762 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.32 6.80 127.77 0.87 0.55 16 2 N -0.59 0.18 2.25 -826.00 -1.86 -1.68 16 3 C 0.56 3.18 7.06 86.79 0.61 3.79 16 4 O -0.57 -7.62 14.71 -3.89 -0.06 -7.67 16 5 C -0.13 -0.33 5.18 -20.09 -0.10 -0.44 16 6 C -0.05 0.06 7.38 22.55 0.17 0.22 16 7 C -0.10 0.14 6.22 22.27 0.14 0.28 16 8 Br -0.03 0.05 33.69 -20.37 -0.69 -0.64 16 9 C -0.07 0.15 8.41 22.34 0.19 0.34 16 10 C -0.11 0.08 5.39 -19.90 -0.11 -0.03 16 11 C -0.07 0.11 2.82 71.24 0.20 0.31 16 12 O -0.55 0.52 12.76 -148.98 -1.90 -1.39 16 13 Si 0.77 -2.67 29.78 68.60 2.04 -0.63 16 14 C -0.03 -0.10 9.19 22.53 0.21 0.11 16 15 C 0.15 -0.14 3.02 44.99 0.14 0.00 16 16 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 17 C -0.12 0.73 4.91 30.60 0.15 0.88 16 18 C -0.14 0.57 4.97 30.60 0.15 0.73 16 19 C 0.11 -0.16 3.47 30.59 0.11 -0.05 16 20 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 21 O -0.59 -0.48 13.32 -148.98 -1.98 -2.47 16 22 C -0.14 -0.09 5.39 30.59 0.16 0.08 16 23 C -0.14 -0.23 5.19 30.59 0.16 -0.07 16 24 H 0.07 -0.51 5.19 -2.38 -0.01 -0.52 16 25 H 0.11 -1.03 5.12 -2.39 -0.01 -1.04 16 26 H 0.08 -0.56 6.05 -2.39 -0.01 -0.58 16 27 H 0.16 -0.58 5.40 -2.91 -0.02 -0.59 16 28 H 0.16 -0.89 4.86 -2.91 -0.01 -0.91 16 29 H 0.11 0.03 7.96 -2.39 -0.02 0.01 16 30 H 0.40 -3.80 8.70 -74.06 -0.64 -4.45 16 31 H -0.29 -1.16 7.11 99.48 0.71 -0.46 16 32 H -0.28 -0.27 7.11 99.48 0.71 0.44 16 33 H 0.13 0.69 8.06 -2.91 -0.02 0.66 16 34 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 35 H 0.10 -0.89 6.78 -2.39 -0.02 -0.91 16 36 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 37 H 0.09 -0.41 3.78 -2.39 -0.01 -0.41 16 38 H 0.39 -2.19 9.08 -74.06 -0.67 -2.86 16 39 H 0.06 0.03 8.14 -2.38 -0.02 0.01 16 40 H 0.05 0.19 7.59 -2.39 -0.02 0.17 16 41 H 0.06 0.55 5.85 -2.39 -0.01 0.54 16 42 H 0.08 -0.08 8.14 -2.38 -0.02 -0.10 16 Total: 0.00 -18.40 339.39 -1.60 -20.00 By element: Atomic # 1 Polarization: -12.03 SS G_CDS: -0.19 Total: -12.22 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: 3.04 Total: 6.69 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -1.86 Total: -1.68 kcal Atomic # 8 Polarization: -7.58 SS G_CDS: -3.94 Total: -11.53 kcal Atomic # 14 Polarization: -2.67 SS G_CDS: 2.04 Total: -0.63 kcal Atomic # 35 Polarization: 0.05 SS G_CDS: -0.69 Total: -0.64 kcal Total: -18.40 -1.60 -20.00 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.939 kcal (2) G-P(sol) polarization free energy of solvation -18.401 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.340 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.597 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.997 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds