Wall clock time and date at job start Sun Mar 7 2021 05:39:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39278 * 121.03713 * 2 1 4 4 C 1.46498 * 134.19751 * 359.94014 * 3 2 1 5 5 C 1.50698 * 126.60206 * 0.31098 * 4 3 2 6 6 O 1.42895 * 109.47576 * 74.99551 * 5 4 3 7 7 Si 1.86299 * 109.47474 * 195.00014 * 5 4 3 8 8 C 1.34180 * 106.80323 * 180.28345 * 4 3 2 9 9 N 1.36950 * 109.95248 * 0.02562 * 8 4 3 10 10 C 1.37160 * 110.11019 * 0.02562 * 9 8 4 11 11 N 1.32816 * 132.96271 * 180.02562 * 10 9 8 12 12 C 1.31306 * 121.89033 * 179.97438 * 11 10 9 13 13 C 1.39754 * 121.02908 * 179.77206 * 2 1 3 14 14 C 1.47668 * 120.44971 * 0.02562 * 13 2 1 15 15 O 1.21571 * 120.00383 * 50.49308 * 14 13 2 16 16 N 1.34779 * 119.99690 * 230.49067 * 14 13 2 17 17 C 1.46504 * 120.00013 * 355.63038 * 16 14 13 18 18 C 1.46497 * 120.00201 * 175.62493 * 16 14 13 19 19 H 1.08998 * 109.47076 * 0.02562 * 18 16 14 20 20 C 1.52998 * 109.47213 * 120.00366 * 18 16 14 21 21 C 1.53000 * 109.47480 * 180.02562 * 20 18 16 22 22 C 1.53007 * 109.46704 * 299.99687 * 21 20 18 23 23 H 1.08998 * 109.46616 * 179.97438 * 22 21 20 24 24 O 1.42892 * 109.47180 * 300.00068 * 22 21 20 25 25 C 1.53008 * 109.46864 * 60.00105 * 22 21 20 26 26 C 1.52998 * 109.47395 * 240.00350 * 18 16 14 27 27 H 1.09005 * 109.47367 * 266.43509 * 1 2 3 28 28 H 1.09008 * 109.46736 * 26.42725 * 1 2 3 29 29 H 1.08993 * 109.47615 * 146.43056 * 1 2 3 30 30 H 1.09000 * 109.46839 * 314.99426 * 5 4 3 31 31 H 0.96698 * 114.00105 * 59.99728 * 6 5 4 32 32 H 1.48505 * 110.00042 * 58.67140 * 7 5 4 33 33 H 1.48499 * 110.00431 * 179.97438 * 7 5 4 34 34 H 1.08002 * 125.02639 * 179.97438 * 8 4 3 35 35 H 0.96996 * 124.94419 * 180.02562 * 9 8 4 36 36 H 1.08007 * 119.31110 * 179.97438 * 12 11 10 37 37 H 1.08995 * 109.46792 * 275.18743 * 17 16 14 38 38 H 1.08998 * 109.47117 * 35.18840 * 17 16 14 39 39 H 1.09000 * 109.47004 * 155.18754 * 17 16 14 40 40 H 1.09005 * 109.46830 * 300.00415 * 20 18 16 41 41 H 1.08998 * 109.46998 * 60.00077 * 20 18 16 42 42 H 1.08995 * 109.47526 * 180.02562 * 21 20 18 43 43 H 1.08998 * 109.47397 * 59.99765 * 21 20 18 44 44 H 0.96696 * 114.00241 * 300.00070 * 24 22 21 45 45 H 1.08998 * 109.47135 * 59.99985 * 25 22 21 46 46 H 1.08996 * 109.46841 * 179.97438 * 25 22 21 47 47 H 1.09004 * 109.46730 * 60.00087 * 26 18 16 48 48 H 1.08998 * 109.47123 * 300.00112 * 26 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1934 0.0000 4 6 1.8517 2.6100 -0.0011 5 6 0.4529 3.1705 0.0039 6 8 -0.1134 3.0265 1.3079 7 14 0.5054 4.9755 -0.4544 8 6 2.9949 3.3124 -0.0068 9 7 4.0670 2.4603 -0.0100 10 6 3.6348 1.1586 -0.0070 11 7 4.2720 -0.0068 -0.0077 12 6 3.6266 -1.1502 -0.0036 13 6 2.2274 -1.1976 0.0048 14 6 1.5223 -2.4950 0.0094 15 8 0.6438 -2.7124 -0.8025 16 7 1.8527 -3.4383 0.9136 17 6 2.9743 -3.2144 1.8291 18 6 1.0902 -4.6874 0.9811 19 1 0.3016 -4.6727 0.2287 20 6 2.0243 -5.8700 0.7173 21 6 1.2279 -7.1745 0.7871 22 6 0.6042 -7.3174 2.1770 23 1 0.0365 -8.2465 2.2266 24 8 1.6380 -7.3371 3.1632 25 6 -0.3300 -6.1347 2.4408 26 6 0.4669 -4.8300 2.3710 27 1 -0.3634 -0.0639 1.0257 28 1 -0.3633 0.9204 -0.4574 29 1 -0.3634 -0.8562 -0.5682 30 1 -0.1578 2.6298 -0.7191 31 1 0.3794 3.4831 2.0034 32 1 1.1216 5.1413 -1.7954 33 1 -0.8681 5.5400 -0.4536 34 1 3.0601 4.3905 -0.0094 35 1 4.9967 2.7370 -0.0139 36 1 4.1868 -2.0736 -0.0049 37 1 3.9052 -3.5016 1.3402 38 1 3.0168 -2.1596 2.1006 39 1 2.8354 -3.8155 2.7277 40 1 2.4684 -5.7684 -0.2730 41 1 2.8131 -5.8848 1.4694 42 1 1.8934 -8.0171 0.5996 43 1 0.4393 -7.1596 0.0348 44 1 2.2687 -8.0624 3.0576 45 1 -1.1185 -6.1197 1.6885 46 1 -0.7746 -6.2367 3.4307 47 1 -0.1986 -3.9874 2.5590 48 1 1.2557 -4.8448 3.1232 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:32 Heat of formation + Delta-G solvation = -39.100398 kcal Electronic energy + Delta-G solvation = -31588.218560 eV Core-core repulsion = 27417.269076 eV Total energy + Delta-G solvation = -4170.949484 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.173 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.82322 -41.34928 -39.87818 -38.63688 -37.74785 -37.02435 -35.00801 -34.91310 -31.96529 -31.84745 -31.36594 -29.71737 -28.81554 -27.88629 -26.44865 -24.77947 -24.00074 -23.76026 -22.96282 -21.02103 -20.63151 -20.23732 -19.28144 -18.57108 -17.87926 -17.57666 -17.43573 -17.30819 -16.82498 -16.53030 -16.34425 -15.93193 -15.70684 -15.57231 -15.42161 -15.10211 -14.70869 -14.40673 -14.22531 -14.14456 -14.01299 -13.89123 -13.75367 -13.51025 -13.47013 -13.28282 -13.19977 -13.03941 -12.99433 -12.83144 -12.37617 -12.21406 -12.08417 -12.00668 -11.41240 -11.29613 -11.09642 -11.00354 -10.79238 -10.48071 -10.15621 -9.60756 -9.49806 -9.09413 -5.12785 -0.13890 0.04816 1.24171 1.40124 1.58845 1.67413 1.73866 1.95524 1.99661 2.78772 3.26935 3.32621 3.45093 3.50790 3.59911 3.63640 3.70671 3.73468 3.80265 3.94726 4.06300 4.12899 4.16113 4.19069 4.26146 4.31284 4.35304 4.36898 4.46757 4.48965 4.52995 4.63110 4.68184 4.75829 4.80456 4.84726 4.88484 4.92472 5.02302 5.07777 5.12869 5.15838 5.21896 5.28066 5.37136 5.38007 5.45024 5.60745 5.80386 6.14099 6.38650 6.60709 6.68402 6.91201 7.21278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.071 3.929 3 C -0.144 4.144 4 C -0.184 4.184 5 C -0.036 4.036 6 O -0.538 6.538 7 Si 0.686 3.314 8 C 0.071 3.929 9 N -0.571 5.571 10 C 0.304 3.696 11 N -0.502 5.502 12 C 0.177 3.823 13 C -0.222 4.222 14 C 0.577 3.423 15 O -0.531 6.531 16 N -0.605 5.605 17 C 0.072 3.928 18 C 0.141 3.859 19 H 0.101 0.899 20 C -0.122 4.122 21 C -0.150 4.150 22 C 0.103 3.897 23 H 0.057 0.943 24 O -0.564 6.564 25 C -0.110 4.110 26 C -0.124 4.124 27 H 0.082 0.918 28 H 0.076 0.924 29 H 0.092 0.908 30 H 0.115 0.885 31 H 0.378 0.622 32 H -0.255 1.255 33 H -0.253 1.253 34 H 0.186 0.814 35 H 0.425 0.575 36 H 0.166 0.834 37 H 0.060 0.940 38 H 0.071 0.929 39 H 0.081 0.919 40 H 0.065 0.935 41 H 0.073 0.927 42 H 0.069 0.931 43 H 0.075 0.925 44 H 0.377 0.623 45 H 0.078 0.922 46 H 0.074 0.926 47 H 0.065 0.935 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.316 1.538 3.463 5.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C 0.062 3.938 3 C -0.151 4.151 4 C -0.192 4.192 5 C -0.147 4.147 6 O -0.343 6.343 7 Si 0.587 3.413 8 C -0.055 4.055 9 N -0.177 5.177 10 C 0.071 3.929 11 N -0.215 5.215 12 C 0.010 3.990 13 C -0.229 4.229 14 C 0.365 3.635 15 O -0.407 6.407 16 N -0.337 5.337 17 C -0.071 4.071 18 C 0.038 3.962 19 H 0.119 0.881 20 C -0.161 4.161 21 C -0.189 4.189 22 C 0.044 3.956 23 H 0.075 0.925 24 O -0.369 6.369 25 C -0.148 4.148 26 C -0.162 4.162 27 H 0.101 0.899 28 H 0.095 0.905 29 H 0.111 0.889 30 H 0.132 0.868 31 H 0.225 0.775 32 H -0.180 1.180 33 H -0.177 1.177 34 H 0.202 0.798 35 H 0.264 0.736 36 H 0.183 0.817 37 H 0.078 0.922 38 H 0.090 0.910 39 H 0.099 0.901 40 H 0.084 0.916 41 H 0.092 0.908 42 H 0.088 0.912 43 H 0.094 0.906 44 H 0.224 0.776 45 H 0.097 0.903 46 H 0.093 0.907 47 H 0.084 0.916 48 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 2.851 2.394 2.332 4.393 hybrid contribution 0.133 -1.021 -0.416 1.110 sum 2.984 1.373 1.916 3.803 Atomic orbital electron populations 1.21136 0.89386 1.04674 1.03747 1.19734 0.96671 0.89248 0.88128 1.19407 0.92835 0.93416 1.09397 1.20656 0.95292 0.91098 1.12132 1.24501 0.90513 1.10611 0.89057 1.86520 1.53717 1.77913 1.16150 0.95332 0.84403 0.76718 0.84857 1.21712 0.85008 0.95754 1.03053 1.41492 1.09554 1.02697 1.63966 1.18483 0.89301 0.85908 0.99247 1.66480 1.40435 0.95957 1.18600 1.22609 0.89864 0.94543 0.92027 1.20377 0.95134 0.93599 1.13834 1.17981 0.82242 0.83007 0.80313 1.90758 1.32129 1.79774 1.38086 1.47809 1.33058 1.17499 1.35287 1.21955 0.88520 1.02650 0.94014 1.21154 0.94278 0.82151 0.98589 0.88107 1.21773 0.98594 0.93424 1.02282 1.22225 1.00653 0.97885 0.98089 1.21803 0.88686 0.98123 0.86997 0.92504 1.86510 1.42124 1.55024 1.53263 1.21521 0.97097 0.93180 1.02988 1.21803 1.00170 0.97475 0.96776 0.89918 0.90494 0.88910 0.86751 0.77539 1.17953 1.17716 0.79771 0.73623 0.81730 0.92193 0.91008 0.90080 0.91637 0.90796 0.91194 0.90647 0.77617 0.90343 0.90739 0.91639 0.90489 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.42 9.42 36.00 0.34 -0.08 16 2 C 0.07 0.25 5.97 -103.67 -0.62 -0.36 16 3 C -0.14 -0.41 6.16 -105.13 -0.65 -1.06 16 4 C -0.18 -0.05 5.57 -102.73 -0.57 -0.62 16 5 C -0.04 0.02 2.11 36.00 0.08 0.09 16 6 O -0.54 0.11 12.88 -35.23 -0.45 -0.34 16 7 Si 0.69 -1.42 30.77 -169.99 -5.23 -6.65 16 8 C 0.07 -0.15 10.44 -16.70 -0.17 -0.32 16 9 N -0.57 0.45 6.04 -12.12 -0.07 0.38 16 10 C 0.30 0.78 8.42 -155.71 -1.31 -0.53 16 11 N -0.50 -1.59 10.37 -11.96 -0.12 -1.72 16 12 C 0.18 0.38 9.00 -17.12 -0.15 0.23 16 13 C -0.22 -0.72 4.82 -104.82 -0.51 -1.22 16 14 C 0.58 2.19 6.75 -12.41 -0.08 2.10 16 15 O -0.53 -3.65 14.35 5.30 0.08 -3.58 16 16 N -0.60 -0.77 2.76 -175.12 -0.48 -1.25 16 17 C 0.07 -0.08 8.13 59.85 0.49 0.41 16 18 C 0.14 0.13 2.51 -67.93 -0.17 -0.04 16 19 H 0.10 0.28 6.91 -51.93 -0.36 -0.08 16 20 C -0.12 0.04 5.06 -26.73 -0.14 -0.09 16 21 C -0.15 0.21 5.64 -26.73 -0.15 0.05 16 22 C 0.10 -0.10 3.77 -26.72 -0.10 -0.21 16 23 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 24 O -0.56 0.26 11.97 -35.23 -0.42 -0.16 16 25 C -0.11 0.04 5.67 -26.71 -0.15 -0.11 16 26 C -0.12 -0.04 5.05 -26.71 -0.13 -0.18 16 27 H 0.08 0.23 8.14 -51.93 -0.42 -0.20 16 28 H 0.08 0.20 5.19 -51.92 -0.27 -0.07 16 29 H 0.09 0.43 5.86 -51.93 -0.30 0.12 16 30 H 0.12 0.08 6.02 -51.93 -0.31 -0.23 16 31 H 0.38 -1.57 8.70 45.56 0.40 -1.17 16 32 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 33 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 34 H 0.19 -1.14 6.36 -52.49 -0.33 -1.47 16 35 H 0.43 -1.43 8.96 -40.82 -0.37 -1.79 16 36 H 0.17 -0.04 6.49 -52.48 -0.34 -0.38 16 37 H 0.06 -0.14 7.14 -51.93 -0.37 -0.51 16 38 H 0.07 -0.05 6.36 -51.93 -0.33 -0.38 16 39 H 0.08 -0.13 6.44 -51.93 -0.33 -0.47 16 40 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.07 -0.04 7.21 -51.93 -0.37 -0.42 16 42 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 43 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.38 -1.45 9.08 45.56 0.41 -1.04 16 45 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 46 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 47 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 48 H 0.08 0.06 6.21 -51.93 -0.32 -0.26 16 LS Contribution 369.90 15.07 5.57 5.57 Total: 0.00 -10.07 369.90 -10.93 -21.00 By element: Atomic # 1 Polarization: -5.54 SS G_CDS: -5.79 Total: -11.33 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -4.01 Total: -1.94 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: -0.68 Total: -2.59 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -0.80 Total: -4.08 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.23 Total: -6.65 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -10.07 -10.93 -21.00 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.097 kcal (2) G-P(sol) polarization free energy of solvation -10.071 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.932 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.003 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds