Wall clock time and date at job start Sun Mar 7 2021 05:39:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39278 * 121.03713 * 2 1 4 4 C 1.46498 * 134.19751 * 359.94014 * 3 2 1 5 5 C 1.50698 * 126.60206 * 0.31098 * 4 3 2 6 6 O 1.42895 * 109.47576 * 74.99551 * 5 4 3 7 7 Si 1.86299 * 109.47474 * 195.00014 * 5 4 3 8 8 C 1.34180 * 106.80323 * 180.28345 * 4 3 2 9 9 N 1.36950 * 109.95248 * 0.02562 * 8 4 3 10 10 C 1.37160 * 110.11019 * 0.02562 * 9 8 4 11 11 N 1.32816 * 132.96271 * 180.02562 * 10 9 8 12 12 C 1.31306 * 121.89033 * 179.97438 * 11 10 9 13 13 C 1.39754 * 121.02908 * 179.77206 * 2 1 3 14 14 C 1.47668 * 120.44971 * 0.02562 * 13 2 1 15 15 O 1.21571 * 120.00383 * 50.49308 * 14 13 2 16 16 N 1.34779 * 119.99690 * 230.49067 * 14 13 2 17 17 C 1.46504 * 120.00013 * 355.63038 * 16 14 13 18 18 C 1.46497 * 120.00201 * 175.62493 * 16 14 13 19 19 H 1.08998 * 109.47076 * 0.02562 * 18 16 14 20 20 C 1.52998 * 109.47213 * 120.00366 * 18 16 14 21 21 C 1.53000 * 109.47480 * 180.02562 * 20 18 16 22 22 C 1.53007 * 109.46704 * 299.99687 * 21 20 18 23 23 H 1.08998 * 109.46616 * 179.97438 * 22 21 20 24 24 O 1.42892 * 109.47180 * 300.00068 * 22 21 20 25 25 C 1.53008 * 109.46864 * 60.00105 * 22 21 20 26 26 C 1.52998 * 109.47395 * 240.00350 * 18 16 14 27 27 H 1.09005 * 109.47367 * 266.43509 * 1 2 3 28 28 H 1.09008 * 109.46736 * 26.42725 * 1 2 3 29 29 H 1.08993 * 109.47615 * 146.43056 * 1 2 3 30 30 H 1.09000 * 109.46839 * 314.99426 * 5 4 3 31 31 H 0.96698 * 114.00105 * 59.99728 * 6 5 4 32 32 H 1.48505 * 110.00042 * 58.67140 * 7 5 4 33 33 H 1.48499 * 110.00431 * 179.97438 * 7 5 4 34 34 H 1.08002 * 125.02639 * 179.97438 * 8 4 3 35 35 H 0.96996 * 124.94419 * 180.02562 * 9 8 4 36 36 H 1.08007 * 119.31110 * 179.97438 * 12 11 10 37 37 H 1.08995 * 109.46792 * 275.18743 * 17 16 14 38 38 H 1.08998 * 109.47117 * 35.18840 * 17 16 14 39 39 H 1.09000 * 109.47004 * 155.18754 * 17 16 14 40 40 H 1.09005 * 109.46830 * 300.00415 * 20 18 16 41 41 H 1.08998 * 109.46998 * 60.00077 * 20 18 16 42 42 H 1.08995 * 109.47526 * 180.02562 * 21 20 18 43 43 H 1.08998 * 109.47397 * 59.99765 * 21 20 18 44 44 H 0.96696 * 114.00241 * 300.00070 * 24 22 21 45 45 H 1.08998 * 109.47135 * 59.99985 * 25 22 21 46 46 H 1.08996 * 109.46841 * 179.97438 * 25 22 21 47 47 H 1.09004 * 109.46730 * 60.00087 * 26 18 16 48 48 H 1.08998 * 109.47123 * 300.00112 * 26 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1934 0.0000 4 6 1.8517 2.6100 -0.0011 5 6 0.4529 3.1705 0.0039 6 8 -0.1134 3.0265 1.3079 7 14 0.5054 4.9755 -0.4544 8 6 2.9949 3.3124 -0.0068 9 7 4.0670 2.4603 -0.0100 10 6 3.6348 1.1586 -0.0070 11 7 4.2720 -0.0068 -0.0077 12 6 3.6266 -1.1502 -0.0036 13 6 2.2274 -1.1976 0.0048 14 6 1.5223 -2.4950 0.0094 15 8 0.6438 -2.7124 -0.8025 16 7 1.8527 -3.4383 0.9136 17 6 2.9743 -3.2144 1.8291 18 6 1.0902 -4.6874 0.9811 19 1 0.3016 -4.6727 0.2287 20 6 2.0243 -5.8700 0.7173 21 6 1.2279 -7.1745 0.7871 22 6 0.6042 -7.3174 2.1770 23 1 0.0365 -8.2465 2.2266 24 8 1.6380 -7.3371 3.1632 25 6 -0.3300 -6.1347 2.4408 26 6 0.4669 -4.8300 2.3710 27 1 -0.3634 -0.0639 1.0257 28 1 -0.3633 0.9204 -0.4574 29 1 -0.3634 -0.8562 -0.5682 30 1 -0.1578 2.6298 -0.7191 31 1 0.3794 3.4831 2.0034 32 1 1.1216 5.1413 -1.7954 33 1 -0.8681 5.5400 -0.4536 34 1 3.0601 4.3905 -0.0094 35 1 4.9967 2.7370 -0.0139 36 1 4.1868 -2.0736 -0.0049 37 1 3.9052 -3.5016 1.3402 38 1 3.0168 -2.1596 2.1006 39 1 2.8354 -3.8155 2.7277 40 1 2.4684 -5.7684 -0.2730 41 1 2.8131 -5.8848 1.4694 42 1 1.8934 -8.0171 0.5996 43 1 0.4393 -7.1596 0.0348 44 1 2.2687 -8.0624 3.0576 45 1 -1.1185 -6.1197 1.6885 46 1 -0.7746 -6.2367 3.4307 47 1 -0.1986 -3.9874 2.5590 48 1 1.2557 -4.8448 3.1232 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:32 Heat of formation + Delta-G solvation = -41.718204 kcal Electronic energy + Delta-G solvation = -31588.332076 eV Core-core repulsion = 27417.269076 eV Total energy + Delta-G solvation = -4171.063001 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.173 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.88816 -41.49249 -39.91762 -38.74395 -37.71399 -37.14013 -35.15168 -34.96341 -31.99569 -31.84059 -31.43945 -29.74761 -28.98883 -27.94867 -26.42928 -24.88842 -24.09665 -23.75706 -23.02041 -21.07105 -20.62029 -20.32855 -19.35504 -18.66589 -17.92684 -17.59282 -17.47071 -17.39499 -16.86754 -16.57551 -16.37770 -16.03470 -15.67525 -15.59219 -15.41522 -15.17541 -14.81766 -14.45086 -14.41502 -14.15579 -14.05152 -14.00774 -13.77407 -13.66110 -13.50382 -13.29469 -13.20271 -13.18926 -13.04434 -12.89621 -12.37557 -12.26901 -12.06777 -12.00467 -11.46445 -11.42167 -11.19178 -11.13693 -10.74512 -10.58864 -10.20716 -9.75941 -9.59986 -9.11053 -4.99137 -0.30118 -0.07196 1.34496 1.42364 1.49559 1.64804 1.75011 1.87277 2.05592 2.62163 3.23732 3.39779 3.44729 3.47246 3.57707 3.62529 3.69759 3.74083 3.79092 3.96440 4.06932 4.12710 4.16374 4.18878 4.20591 4.31411 4.33067 4.37433 4.44703 4.49518 4.52174 4.55475 4.59262 4.63420 4.76193 4.79901 4.90921 4.94485 4.98764 5.03505 5.08191 5.12725 5.15905 5.19687 5.26740 5.30922 5.37892 5.51064 5.72905 6.20521 6.24135 6.81491 6.88803 6.94153 6.97776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.048 3.952 3 C -0.160 4.160 4 C -0.209 4.209 5 C -0.049 4.049 6 O -0.557 6.557 7 Si 0.805 3.195 8 C 0.099 3.901 9 N -0.561 5.561 10 C 0.284 3.716 11 N -0.511 5.511 12 C 0.175 3.825 13 C -0.230 4.230 14 C 0.574 3.426 15 O -0.572 6.572 16 N -0.598 5.598 17 C 0.069 3.931 18 C 0.141 3.859 19 H 0.077 0.923 20 C -0.115 4.115 21 C -0.147 4.147 22 C 0.106 3.894 23 H 0.067 0.933 24 O -0.578 6.578 25 C -0.113 4.113 26 C -0.116 4.116 27 H 0.080 0.920 28 H 0.079 0.921 29 H 0.073 0.927 30 H 0.094 0.906 31 H 0.394 0.606 32 H -0.282 1.282 33 H -0.305 1.305 34 H 0.232 0.768 35 H 0.439 0.561 36 H 0.185 0.815 37 H 0.078 0.922 38 H 0.069 0.931 39 H 0.090 0.910 40 H 0.057 0.943 41 H 0.081 0.919 42 H 0.085 0.915 43 H 0.071 0.929 44 H 0.392 0.608 45 H 0.080 0.920 46 H 0.072 0.928 47 H 0.052 0.948 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.155 2.393 4.252 7.097 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.040 3.960 3 C -0.167 4.167 4 C -0.216 4.216 5 C -0.158 4.158 6 O -0.364 6.364 7 Si 0.709 3.291 8 C -0.028 4.028 9 N -0.168 5.168 10 C 0.050 3.950 11 N -0.225 5.225 12 C 0.007 3.993 13 C -0.237 4.237 14 C 0.362 3.638 15 O -0.452 6.452 16 N -0.329 5.329 17 C -0.073 4.073 18 C 0.038 3.962 19 H 0.095 0.905 20 C -0.154 4.154 21 C -0.185 4.185 22 C 0.048 3.952 23 H 0.085 0.915 24 O -0.386 6.386 25 C -0.151 4.151 26 C -0.154 4.154 27 H 0.098 0.902 28 H 0.097 0.903 29 H 0.091 0.909 30 H 0.111 0.889 31 H 0.244 0.756 32 H -0.209 1.209 33 H -0.233 1.233 34 H 0.248 0.752 35 H 0.280 0.720 36 H 0.202 0.798 37 H 0.097 0.903 38 H 0.088 0.912 39 H 0.109 0.891 40 H 0.076 0.924 41 H 0.100 0.900 42 H 0.103 0.897 43 H 0.090 0.910 44 H 0.241 0.759 45 H 0.098 0.902 46 H 0.091 0.909 47 H 0.071 0.929 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 4.755 3.211 3.175 6.558 hybrid contribution -0.469 -1.264 -0.638 1.492 sum 4.286 1.947 2.537 5.348 Atomic orbital electron populations 1.20982 0.89845 1.03816 1.03221 1.19876 0.96658 0.90132 0.89361 1.19725 0.93323 0.94403 1.09224 1.20791 0.96403 0.90150 1.14275 1.24766 0.89900 1.12372 0.88727 1.86482 1.54491 1.78635 1.16832 0.94083 0.80607 0.72539 0.81834 1.22410 0.83615 0.97368 0.99382 1.41609 1.10712 1.01570 1.62879 1.18755 0.89467 0.86898 0.99845 1.66525 1.40660 0.96400 1.18866 1.22858 0.89435 0.95177 0.91810 1.20400 0.95724 0.93145 1.14428 1.18162 0.81803 0.83567 0.80246 1.90728 1.34009 1.80557 1.39955 1.47888 1.33240 1.17022 1.34700 1.22115 0.88315 1.02805 0.94044 1.21163 0.94189 0.82617 0.98234 0.90451 1.21711 0.98452 0.93224 1.01976 1.22210 1.00678 0.97716 0.97890 1.21754 0.88614 0.97954 0.86924 0.91544 1.86473 1.42596 1.56084 1.53421 1.21558 0.97391 0.93195 1.02970 1.21712 0.99933 0.97575 0.96194 0.90155 0.90260 0.90865 0.88881 0.75569 1.20925 1.23315 0.75160 0.71962 0.79796 0.90311 0.91240 0.89128 0.92422 0.90024 0.89671 0.91047 0.75900 0.90164 0.90921 0.92887 0.90441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.16 9.42 71.24 0.67 -0.49 16 2 C 0.05 0.46 5.97 -19.25 -0.11 0.34 16 3 C -0.16 -1.07 6.16 -20.19 -0.12 -1.20 16 4 C -0.21 -0.06 5.57 -18.64 -0.10 -0.16 16 5 C -0.05 0.02 2.11 71.24 0.15 0.17 16 6 O -0.56 -0.04 12.88 -148.98 -1.92 -1.96 16 7 Si 0.80 -4.10 30.77 68.60 2.11 -1.99 16 8 C 0.10 -0.62 10.44 82.97 0.87 0.25 16 9 N -0.56 1.73 6.04 -192.25 -1.16 0.57 16 10 C 0.28 1.47 8.42 134.02 1.13 2.60 16 11 N -0.51 -3.41 10.37 -191.75 -1.99 -5.40 16 12 C 0.17 0.92 9.00 85.20 0.77 1.69 16 13 C -0.23 -1.96 4.82 -19.99 -0.10 -2.06 16 14 C 0.57 5.82 6.75 86.73 0.59 6.41 16 15 O -0.57 -9.93 14.35 -3.94 -0.06 -9.99 16 16 N -0.60 -2.49 2.76 -826.22 -2.28 -4.77 16 17 C 0.07 -0.12 8.13 127.77 1.04 0.92 16 18 C 0.14 0.49 2.51 44.99 0.11 0.60 16 19 H 0.08 0.66 6.91 -2.39 -0.02 0.64 16 20 C -0.12 0.04 5.06 30.59 0.15 0.19 16 21 C -0.15 0.41 5.64 30.60 0.17 0.58 16 22 C 0.11 -0.24 3.77 30.60 0.12 -0.13 16 23 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 24 O -0.58 0.97 11.97 -148.98 -1.78 -0.81 16 25 C -0.11 -0.01 5.67 30.61 0.17 0.16 16 26 C -0.12 -0.23 5.05 30.61 0.15 -0.08 16 27 H 0.08 0.70 8.14 -2.38 -0.02 0.69 16 28 H 0.08 0.65 5.19 -2.38 -0.01 0.64 16 29 H 0.07 0.98 5.86 -2.39 -0.01 0.96 16 30 H 0.09 0.31 6.02 -2.39 -0.01 0.29 16 31 H 0.39 -3.46 8.70 -74.06 -0.64 -4.11 16 32 H -0.28 0.12 7.11 99.48 0.71 0.82 16 33 H -0.31 -1.12 7.11 99.48 0.71 -0.41 16 34 H 0.23 -3.80 6.36 -2.91 -0.02 -3.81 16 35 H 0.44 -3.84 8.96 -92.71 -0.83 -4.67 16 36 H 0.19 -0.04 6.49 -2.91 -0.02 -0.06 16 37 H 0.08 -0.41 7.14 -2.39 -0.02 -0.43 16 38 H 0.07 -0.05 6.36 -2.39 -0.02 -0.06 16 39 H 0.09 -0.31 6.44 -2.39 -0.02 -0.33 16 40 H 0.06 0.09 8.14 -2.38 -0.02 0.07 16 41 H 0.08 -0.14 7.21 -2.39 -0.02 -0.15 16 42 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 43 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 44 H 0.39 -3.46 9.08 -74.06 -0.67 -4.14 16 45 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 46 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 47 H 0.05 0.23 8.14 -2.38 -0.02 0.21 16 48 H 0.08 0.15 6.21 -2.39 -0.01 0.14 16 Total: 0.00 -26.70 369.90 -2.49 -29.19 By element: Atomic # 1 Polarization: -13.59 SS G_CDS: -1.06 Total: -14.65 kcal Atomic # 6 Polarization: 4.16 SS G_CDS: 5.65 Total: 9.81 kcal Atomic # 7 Polarization: -4.16 SS G_CDS: -5.43 Total: -9.59 kcal Atomic # 8 Polarization: -9.00 SS G_CDS: -3.76 Total: -12.76 kcal Atomic # 14 Polarization: -4.10 SS G_CDS: 2.11 Total: -1.99 kcal Total: -26.70 -2.49 -29.19 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.531 kcal (2) G-P(sol) polarization free energy of solvation -26.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.188 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.718 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds