Wall clock time and date at job start Sun Mar 7 2021 05:39:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.34781 * 120.00090 * 2 1 4 4 O 1.21572 * 119.99898 * 184.33869 * 3 2 1 5 5 C 1.47717 * 119.99810 * 4.34085 * 3 2 1 6 6 C 1.39708 * 120.02505 * 147.73555 * 5 3 2 7 7 C 1.37658 * 119.97603 * 180.02562 * 6 5 3 8 8 C 1.39504 * 120.02766 * 0.02562 * 7 6 5 9 9 C 1.48279 * 119.97688 * 179.97438 * 8 7 6 10 10 C 1.39403 * 120.12228 * 179.97438 * 9 8 7 11 11 C 1.38007 * 119.86827 * 180.27440 * 10 9 8 12 12 C 1.38339 * 120.12654 * 359.51331 * 11 10 9 13 13 C 1.50690 * 119.87008 * 180.21106 * 12 11 10 14 14 O 1.42901 * 109.47171 * 245.24969 * 13 12 11 15 15 Si 1.86300 * 109.47406 * 5.25122 * 13 12 11 16 16 C 1.38337 * 120.25208 * 0.46721 * 12 11 10 17 17 C 1.38000 * 120.13016 * 359.78716 * 16 12 11 18 18 C 1.39503 * 120.04593 * 0.24728 * 8 7 6 19 19 C 1.37670 * 120.02308 * 359.49188 * 18 8 7 20 20 C 1.46499 * 120.00167 * 180.02562 * 2 1 3 21 21 H 1.09003 * 109.47604 * 179.97438 * 20 2 1 22 22 C 1.53002 * 109.47155 * 300.00002 * 20 2 1 23 23 C 1.52995 * 109.47284 * 179.97438 * 22 20 2 24 24 C 1.53007 * 109.47218 * 300.00058 * 23 22 20 25 25 H 1.08996 * 109.47147 * 179.97438 * 24 23 22 26 26 O 1.42902 * 109.46769 * 299.99891 * 24 23 22 27 27 C 1.53002 * 109.47041 * 59.99793 * 24 23 22 28 28 C 1.52995 * 109.47284 * 300.00166 * 27 24 23 29 29 H 1.08998 * 109.47135 * 94.83919 * 1 2 3 30 30 H 1.08993 * 109.46993 * 214.84043 * 1 2 3 31 31 H 1.09000 * 109.46993 * 334.83684 * 1 2 3 32 32 H 1.08007 * 120.01302 * 0.03899 * 6 5 3 33 33 H 1.08004 * 119.99071 * 179.97438 * 7 6 5 34 34 H 1.08002 * 120.06672 * 359.97438 * 10 9 8 35 35 H 1.07994 * 119.93416 * 179.72025 * 11 10 9 36 36 H 1.09001 * 109.47274 * 125.25330 * 13 12 11 37 37 H 0.96697 * 113.99786 * 60.00209 * 14 13 12 38 38 H 1.48508 * 109.99720 * 58.68085 * 15 13 12 39 39 H 1.48500 * 110.00047 * 179.97438 * 15 13 12 40 40 H 1.08001 * 119.93293 * 179.76975 * 16 12 11 41 41 H 1.08005 * 120.06349 * 179.97438 * 17 16 12 42 42 H 1.07995 * 119.98883 * 179.72368 * 18 8 7 43 43 H 1.07999 * 120.01285 * 180.24527 * 19 18 8 44 44 H 1.09001 * 109.46893 * 299.99951 * 22 20 2 45 45 H 1.08996 * 109.47122 * 59.99816 * 22 20 2 46 46 H 1.09002 * 109.47588 * 179.97438 * 23 22 20 47 47 H 1.09003 * 109.47431 * 59.99905 * 23 22 20 48 48 H 0.96698 * 114.00108 * 300.00195 * 26 24 23 49 49 H 1.09001 * 109.46893 * 180.02562 * 27 24 23 50 50 H 1.09003 * 109.46965 * 60.00547 * 27 24 23 51 51 H 1.09003 * 109.47431 * 300.00095 * 28 27 24 52 52 H 1.08993 * 109.47710 * 179.97438 * 28 27 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3520 1.1687 -0.0797 5 6 1.4035 2.4446 0.0968 6 6 1.9823 3.5369 0.7478 7 6 1.2958 4.7267 0.8379 8 6 0.0224 4.8419 0.2800 9 6 -0.7163 6.1239 0.3782 10 6 -1.9887 6.2426 -0.1787 11 6 -2.6692 7.4399 -0.0892 12 6 -2.0951 8.5179 0.5604 13 6 -2.8452 9.8211 0.6589 14 8 -2.1500 10.8279 -0.0795 15 14 -4.5573 9.6069 -0.0436 16 6 -0.8328 8.4057 1.1153 17 6 -0.1408 7.2150 1.0274 18 6 -0.5589 3.7502 -0.3653 19 6 0.1280 2.5610 -0.4613 20 6 2.1975 -1.2687 -0.0006 21 1 3.2692 -1.0696 -0.0009 22 6 1.8279 -2.0716 1.2483 23 6 2.5924 -3.3968 1.2474 24 6 2.2223 -4.1984 -0.0022 25 1 2.7673 -5.1423 -0.0031 26 8 0.8172 -4.4590 -0.0020 27 6 2.5918 -3.3955 -1.2511 28 6 1.8273 -2.0702 -1.2502 29 1 -0.3633 -0.0867 -1.0240 30 1 -0.3633 -0.8434 0.5871 31 1 -0.3633 0.9301 0.4370 32 1 2.9681 3.4479 1.1800 33 1 1.7429 5.5711 1.3415 34 1 -2.4391 5.4007 -0.6835 35 1 -3.6531 7.5344 -0.5242 36 1 -2.9163 10.1214 1.7043 37 1 -2.0494 10.6269 -1.0200 38 1 -5.2796 8.5402 0.6954 39 1 -5.3077 10.8851 0.0483 40 1 -0.3880 9.2518 1.6180 41 1 0.8448 7.1287 1.4606 42 1 -1.5465 3.8391 -0.7930 43 1 -0.3205 1.7172 -0.9643 44 1 2.0912 -1.5004 2.1386 45 1 0.7563 -2.2708 1.2483 46 1 2.3295 -3.9687 2.1374 47 1 3.6642 -3.1981 1.2473 48 1 0.5112 -4.9654 0.7629 49 1 2.3277 -3.9663 -2.1413 50 1 3.6636 -3.1967 -1.2512 51 1 0.7556 -2.2690 -1.2501 52 1 2.0909 -1.4980 -2.1396 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:36 Heat of formation + Delta-G solvation = -43.523009 kcal Electronic energy + Delta-G solvation = -32451.860504 eV Core-core repulsion = 28155.118782 eV Total energy + Delta-G solvation = -4296.741722 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.182 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -41.86414 -40.88767 -40.00545 -39.11227 -37.52770 -37.16694 -35.19424 -33.88864 -32.63158 -31.87472 -31.72209 -31.07719 -29.73167 -28.14528 -26.90207 -24.77073 -24.52032 -23.79282 -23.20204 -22.58714 -21.86267 -20.93339 -20.51080 -18.74524 -18.43575 -17.94578 -17.72220 -17.55733 -16.84144 -16.73315 -16.57882 -16.24831 -15.99503 -15.73681 -15.53792 -15.39467 -15.22694 -14.95462 -14.81017 -14.52409 -14.38303 -14.29746 -14.15421 -14.10666 -14.04563 -13.63220 -13.36262 -13.27652 -13.18423 -13.04781 -12.95915 -12.72100 -12.43352 -12.32308 -12.09267 -12.06534 -11.93400 -11.58527 -11.46876 -11.27447 -11.06103 -10.72465 -10.66284 -10.40182 -10.02402 -9.95304 -9.74445 -9.06651 -4.99766 -0.66100 0.32543 0.40729 0.52448 1.31520 1.62751 1.65464 1.85342 1.97605 2.53669 2.97958 3.32075 3.38147 3.47282 3.57072 3.63616 3.69225 3.73534 3.75033 3.86695 3.94616 3.99584 4.05331 4.07145 4.14000 4.18514 4.27953 4.29717 4.35053 4.37261 4.43289 4.47044 4.47233 4.57232 4.60769 4.64714 4.67641 4.78779 4.88418 4.89596 4.92060 4.96449 5.02089 5.08324 5.09607 5.12273 5.12970 5.20236 5.25044 5.25744 5.35747 5.40032 5.49755 5.50606 5.65713 5.79208 5.93505 6.23518 6.75930 6.92378 6.97976 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.599 5.599 3 C 0.552 3.448 4 O -0.585 6.585 5 C -0.149 4.149 6 C -0.074 4.074 7 C -0.123 4.123 8 C -0.024 4.024 9 C -0.059 4.059 10 C -0.101 4.101 11 C -0.116 4.116 12 C -0.120 4.120 13 C -0.078 4.078 14 O -0.557 6.557 15 Si 0.779 3.221 16 C -0.105 4.105 17 C -0.114 4.114 18 C -0.115 4.115 19 C -0.090 4.090 20 C 0.139 3.861 21 H 0.074 0.926 22 C -0.116 4.116 23 C -0.147 4.147 24 C 0.107 3.893 25 H 0.067 0.933 26 O -0.577 6.577 27 C -0.114 4.114 28 C -0.114 4.114 29 H 0.080 0.920 30 H 0.084 0.916 31 H 0.100 0.900 32 H 0.123 0.877 33 H 0.143 0.857 34 H 0.157 0.843 35 H 0.151 0.849 36 H 0.104 0.896 37 H 0.395 0.605 38 H -0.283 1.283 39 H -0.303 1.303 40 H 0.126 0.874 41 H 0.135 0.865 42 H 0.164 0.836 43 H 0.168 0.832 44 H 0.054 0.946 45 H 0.082 0.918 46 H 0.085 0.915 47 H 0.070 0.930 48 H 0.391 0.609 49 H 0.073 0.927 50 H 0.078 0.922 51 H 0.079 0.921 52 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.555 -3.821 -1.331 6.872 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 N -0.329 5.329 3 C 0.342 3.658 4 O -0.466 6.466 5 C -0.152 4.152 6 C -0.093 4.093 7 C -0.141 4.141 8 C -0.024 4.024 9 C -0.059 4.059 10 C -0.118 4.118 11 C -0.134 4.134 12 C -0.120 4.120 13 C -0.188 4.188 14 O -0.365 6.365 15 Si 0.685 3.315 16 C -0.123 4.123 17 C -0.132 4.132 18 C -0.133 4.133 19 C -0.108 4.108 20 C 0.036 3.964 21 H 0.092 0.908 22 C -0.154 4.154 23 C -0.185 4.185 24 C 0.048 3.952 25 H 0.085 0.915 26 O -0.385 6.385 27 C -0.152 4.152 28 C -0.152 4.152 29 H 0.098 0.902 30 H 0.103 0.897 31 H 0.118 0.882 32 H 0.141 0.859 33 H 0.161 0.839 34 H 0.175 0.825 35 H 0.168 0.832 36 H 0.121 0.879 37 H 0.245 0.755 38 H -0.210 1.210 39 H -0.232 1.232 40 H 0.144 0.856 41 H 0.153 0.847 42 H 0.181 0.819 43 H 0.185 0.815 44 H 0.073 0.927 45 H 0.101 0.899 46 H 0.103 0.897 47 H 0.089 0.911 48 H 0.241 0.759 49 H 0.092 0.908 50 H 0.097 0.903 51 H 0.097 0.903 52 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -5.732 -3.206 -1.192 6.675 hybrid contribution 0.983 -0.055 1.355 1.675 sum -4.749 -3.261 0.162 5.763 Atomic orbital electron populations 1.22719 0.77704 1.05299 1.03444 1.47869 1.08377 1.04972 1.71730 1.18767 0.86648 0.84763 0.75598 1.90756 1.15698 1.87882 1.52313 1.19914 0.96707 0.93639 1.04902 1.21154 0.99405 0.91936 0.96830 1.21332 0.94544 0.97701 1.00512 1.19138 0.93559 0.93142 0.96555 1.18927 0.94911 0.92510 0.99544 1.21522 0.93261 0.98527 0.98514 1.21175 1.00393 0.92652 0.99139 1.20539 0.95925 0.96163 0.99378 1.25244 1.06468 0.86905 1.00154 1.86476 1.79522 1.44080 1.26425 0.93739 0.71895 0.76734 0.89144 1.21064 0.94453 0.97579 0.99170 1.21487 1.00552 0.92465 0.98703 1.21526 1.01571 0.91208 0.98983 1.22037 0.92024 0.99318 0.97380 1.21152 0.96684 0.82242 0.96307 0.90823 1.21711 1.02001 0.95658 0.96060 1.22213 1.00948 0.96154 0.99217 1.21749 0.82239 0.97015 0.94213 0.91516 1.86473 1.23172 1.78168 1.50691 1.21560 1.00363 0.95299 0.98007 1.21677 1.01877 0.95405 0.96240 0.90156 0.89721 0.88206 0.85932 0.83947 0.82534 0.83182 0.87856 0.75479 1.20962 1.23152 0.85600 0.84677 0.81902 0.81477 0.92730 0.89908 0.89663 0.91106 0.75918 0.90792 0.90306 0.90285 0.92778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.23 7.88 127.77 1.01 0.77 16 2 N -0.60 -1.70 2.76 -826.14 -2.28 -3.98 16 3 C 0.55 4.90 7.43 86.75 0.64 5.54 16 4 O -0.58 -10.24 16.09 -3.94 -0.06 -10.30 16 5 C -0.15 -0.68 5.47 -20.06 -0.11 -0.79 16 6 C -0.07 -0.38 9.58 22.49 0.22 -0.16 16 7 C -0.12 -0.21 9.41 22.44 0.21 0.00 16 8 C -0.02 0.00 5.88 -20.00 -0.12 -0.11 16 9 C -0.06 0.03 5.88 -20.05 -0.12 -0.08 16 10 C -0.10 0.38 9.43 22.50 0.21 0.59 16 11 C -0.12 0.44 8.65 22.24 0.19 0.63 16 12 C -0.12 0.11 5.36 -19.82 -0.11 0.00 16 13 C -0.08 0.08 2.80 71.23 0.20 0.28 16 14 O -0.56 -0.07 12.83 -148.98 -1.91 -1.98 16 15 Si 0.78 -2.54 29.79 68.60 2.04 -0.50 16 16 C -0.10 -0.08 9.67 22.24 0.21 0.14 16 17 C -0.11 -0.02 9.43 22.49 0.21 0.19 16 18 C -0.12 0.40 9.41 22.44 0.21 0.61 16 19 C -0.09 0.17 7.41 22.49 0.17 0.34 16 20 C 0.14 0.41 2.52 44.99 0.11 0.52 16 21 H 0.07 0.64 6.91 -2.39 -0.02 0.62 16 22 C -0.12 0.08 5.03 30.59 0.15 0.23 16 23 C -0.15 0.46 5.64 30.59 0.17 0.64 16 24 C 0.11 -0.30 3.77 30.60 0.12 -0.18 16 25 H 0.07 -0.30 8.14 -2.39 -0.02 -0.31 16 26 O -0.58 1.40 11.97 -148.98 -1.78 -0.39 16 27 C -0.11 0.06 5.66 30.59 0.17 0.23 16 28 C -0.11 -0.12 5.06 30.59 0.15 0.04 16 29 H 0.08 -0.62 7.45 -2.39 -0.02 -0.64 16 30 H 0.08 -0.54 6.45 -2.39 -0.02 -0.55 16 31 H 0.10 -0.62 4.70 -2.39 -0.01 -0.63 16 32 H 0.12 0.80 7.95 -2.91 -0.02 0.78 16 33 H 0.14 -0.19 6.19 -2.91 -0.02 -0.21 16 34 H 0.16 -1.49 6.19 -2.91 -0.02 -1.51 16 35 H 0.15 -1.29 4.89 -2.91 -0.01 -1.31 16 36 H 0.10 0.06 7.96 -2.39 -0.02 0.04 16 37 H 0.40 -3.16 8.70 -74.06 -0.64 -3.80 16 38 H -0.28 -0.29 7.11 99.48 0.71 0.42 16 39 H -0.30 -1.48 7.11 99.48 0.71 -0.77 16 40 H 0.13 0.06 8.06 -2.91 -0.02 0.03 16 41 H 0.14 -0.29 6.19 -2.91 -0.02 -0.30 16 42 H 0.16 -1.59 6.19 -2.91 -0.02 -1.61 16 43 H 0.17 -1.17 4.82 -2.91 -0.01 -1.18 16 44 H 0.05 0.09 8.14 -2.39 -0.02 0.07 16 45 H 0.08 -0.19 6.23 -2.39 -0.01 -0.20 16 46 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 47 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 48 H 0.39 -3.72 9.08 -74.06 -0.67 -4.39 16 49 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 50 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 51 H 0.08 0.05 7.21 -2.39 -0.02 0.03 16 52 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 Total: 0.00 -23.44 401.17 -0.38 -23.81 By element: Atomic # 1 Polarization: -15.79 SS G_CDS: -0.30 Total: -16.08 kcal Atomic # 6 Polarization: 5.51 SS G_CDS: 3.92 Total: 9.43 kcal Atomic # 7 Polarization: -1.70 SS G_CDS: -2.28 Total: -3.98 kcal Atomic # 8 Polarization: -8.91 SS G_CDS: -3.76 Total: -12.67 kcal Atomic # 14 Polarization: -2.54 SS G_CDS: 2.04 Total: -0.50 kcal Total: -23.44 -0.38 -23.81 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.711 kcal (2) G-P(sol) polarization free energy of solvation -23.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.812 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds