Wall clock time and date at job start Sun Mar 7 2021 05:39:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34772 * 120.00292 * 2 1 4 4 O 1.21586 * 119.99974 * 184.43376 * 3 2 1 5 5 C 1.47564 * 119.99794 * 4.16511 * 3 2 1 6 6 C 1.40213 * 120.12148 * 130.61190 * 5 3 2 7 7 O 1.35649 * 119.99908 * 0.02562 * 6 5 3 8 8 C 1.38814 * 119.99462 * 179.76148 * 6 5 3 9 9 C 1.37767 * 120.24509 * 0.51665 * 8 6 5 10 10 C 1.39843 * 120.24631 * 359.73588 * 9 8 6 11 11 C 1.47816 * 120.00345 * 179.97438 * 10 9 8 12 12 C 1.35938 * 125.92886 * 359.74717 * 11 10 9 13 13 C 1.40961 * 106.74048 * 179.85218 * 12 11 10 14 14 C 1.34709 * 107.03290 * 0.40232 * 13 12 11 15 15 C 1.50694 * 125.66938 * 179.77270 * 14 13 12 16 16 O 1.42905 * 109.47124 * 64.99641 * 15 14 13 17 17 Si 1.86296 * 109.47482 * 184.99972 * 15 14 13 18 18 O 1.34339 * 108.66433 * 359.74852 * 14 13 12 19 19 C 1.39176 * 119.99875 * 0.02562 * 10 9 8 20 20 C 1.46508 * 119.99528 * 180.02562 * 2 1 3 21 21 H 1.08998 * 109.46689 * 179.97438 * 20 2 1 22 22 C 1.52994 * 109.47126 * 299.99975 * 20 2 1 23 23 C 1.53001 * 109.46838 * 179.97438 * 22 20 2 24 24 C 1.53000 * 109.47145 * 300.00043 * 23 22 20 25 25 H 1.08999 * 109.46799 * 180.02562 * 24 23 22 26 26 O 1.42901 * 109.47019 * 299.99944 * 24 23 22 27 27 C 1.52994 * 109.47287 * 60.00232 * 24 23 22 28 28 C 1.53000 * 109.46967 * 60.00086 * 20 2 1 29 29 H 1.08998 * 109.47185 * 93.14408 * 1 2 3 30 30 H 1.09000 * 109.47267 * 213.14772 * 1 2 3 31 31 H 1.08997 * 109.46783 * 333.15233 * 1 2 3 32 32 H 0.96704 * 114.00238 * 90.00000 * 7 6 5 33 33 H 1.08000 * 119.87788 * 180.27700 * 8 6 5 34 34 H 1.08001 * 119.88016 * 179.76039 * 9 8 6 35 35 H 1.08006 * 126.62452 * 359.97438 * 12 11 10 36 36 H 1.08004 * 126.48441 * 180.15311 * 13 12 11 37 37 H 1.09005 * 109.47122 * 305.00163 * 15 14 13 38 38 H 0.96703 * 113.99728 * 179.97438 * 16 15 14 39 39 H 1.48497 * 110.00392 * 178.67759 * 17 15 14 40 40 H 1.48507 * 110.00015 * 300.00236 * 17 15 14 41 41 H 1.07999 * 120.12168 * 179.97438 * 19 10 9 42 42 H 1.08996 * 109.47232 * 299.99804 * 22 20 2 43 43 H 1.09005 * 109.47014 * 60.00350 * 22 20 2 44 44 H 1.08999 * 109.46795 * 180.02562 * 23 22 20 45 45 H 1.09005 * 109.46999 * 60.00381 * 23 22 20 46 46 H 0.96700 * 114.00233 * 299.99609 * 26 24 23 47 47 H 1.08999 * 109.47697 * 179.97438 * 27 24 23 48 48 H 1.09005 * 109.47014 * 59.99564 * 27 24 23 49 49 H 1.08999 * 109.47716 * 300.00139 * 28 20 2 50 50 H 1.08999 * 109.47271 * 60.00051 * 28 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 3.3521 1.1686 -0.0814 5 6 1.4041 2.4434 0.0928 6 6 1.7943 3.4138 1.0267 7 8 2.8495 3.1804 1.8465 8 6 1.1043 4.6154 1.1083 9 6 0.0287 4.8555 0.2816 10 6 -0.3726 3.8927 -0.6498 11 6 -1.5278 4.1558 -1.5337 12 6 -2.2861 5.2840 -1.5409 13 6 -3.2676 5.1071 -2.5371 14 6 -3.0673 3.8891 -3.0766 15 6 -3.8869 3.2712 -4.1799 16 8 -3.7244 4.0330 -5.3780 17 14 -3.3153 1.5226 -4.4735 18 8 -2.0152 3.3171 -2.4679 19 6 0.3150 2.6864 -0.7438 20 6 2.1975 -1.2689 -0.0006 21 1 3.2691 -1.0697 -0.0009 22 6 1.8278 -2.0717 1.2483 23 6 2.5922 -3.3970 1.2473 24 6 2.2220 -4.1984 -0.0023 25 1 2.7663 -5.1428 -0.0027 26 8 0.8169 -4.4589 -0.0021 27 6 2.5916 -3.3956 -1.2512 28 6 1.8278 -2.0705 -1.2502 29 1 -0.3633 -0.0564 -1.0261 30 1 -0.3634 -0.8604 0.5619 31 1 -0.3633 0.9169 0.4641 32 1 3.6991 3.4696 1.4863 33 1 1.4093 5.3634 1.8253 34 1 -0.5064 5.7910 0.3529 35 1 -2.1596 6.1494 -0.9072 36 1 -4.0373 5.8129 -2.8128 37 1 -4.9384 3.2663 -3.8923 38 1 -4.2245 3.6917 -6.1320 39 1 -4.1369 0.8914 -5.5374 40 1 -1.8831 1.5155 -4.8662 41 1 0.0065 1.9412 -1.4621 42 1 2.0912 -1.5005 2.1385 43 1 0.7561 -2.2708 1.2481 44 1 2.3285 -3.9691 2.1368 45 1 3.6640 -3.1982 1.2472 46 1 0.5109 -4.9654 0.7627 47 1 2.3283 -3.9667 -2.1415 48 1 3.6634 -3.1969 -1.2513 49 1 0.7561 -2.2696 -1.2504 50 1 2.0911 -1.4986 -2.1399 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:51 Heat of formation + Delta-G solvation = -102.766814 kcal Electronic energy + Delta-G solvation = -35032.600929 eV Core-core repulsion = 30379.689579 eV Total energy + Delta-G solvation = -4652.911351 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -43.66110 -41.77141 -40.48947 -39.26072 -38.17926 -37.85899 -36.92286 -35.02435 -34.15012 -32.83073 -32.48227 -31.85732 -30.20748 -29.83816 -27.93288 -26.35014 -25.34208 -23.82430 -23.66328 -23.28026 -22.45589 -21.44937 -20.81211 -20.39196 -19.28933 -18.86343 -18.74540 -18.05278 -17.59433 -17.51984 -17.05310 -16.95694 -16.65295 -16.54811 -16.12205 -15.98398 -15.77253 -15.63364 -15.13277 -14.76967 -14.56106 -14.42952 -14.28169 -14.12873 -14.06593 -14.02944 -13.90561 -13.68130 -13.32329 -13.26209 -13.21874 -13.07222 -13.05563 -12.90374 -12.78486 -12.39664 -12.09280 -12.06768 -11.80029 -11.40773 -11.26207 -11.02951 -10.91219 -10.73810 -10.67765 -10.41074 -10.15301 -9.61733 -8.87060 -5.04467 -0.51042 -0.10066 0.78664 1.09176 1.37758 1.51824 1.69121 1.76998 1.91834 1.96838 2.53697 3.08745 3.16397 3.26681 3.31398 3.50472 3.64974 3.68532 3.73484 3.79993 3.91702 3.96428 4.01025 4.07101 4.10700 4.15989 4.18870 4.27286 4.33629 4.39302 4.45793 4.48930 4.52770 4.63091 4.64203 4.69102 4.74806 4.80551 4.85878 4.88234 4.91969 5.02043 5.06500 5.09738 5.13504 5.15488 5.19108 5.28256 5.40527 5.43827 5.47796 5.57769 6.04997 6.25102 6.34811 6.60024 6.68174 7.15355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.603 5.603 3 C 0.571 3.429 4 O -0.531 6.531 5 C -0.154 4.154 6 C 0.167 3.833 7 O -0.489 6.489 8 C -0.143 4.143 9 C -0.058 4.058 10 C -0.030 4.030 11 C 0.037 3.963 12 C -0.187 4.187 13 C -0.168 4.168 14 C -0.003 4.003 15 C -0.036 4.036 16 O -0.533 6.533 17 Si 0.693 3.307 18 O -0.165 6.165 19 C -0.057 4.057 20 C 0.142 3.858 21 H 0.100 0.900 22 C -0.123 4.123 23 C -0.150 4.150 24 C 0.103 3.897 25 H 0.057 0.943 26 O -0.563 6.563 27 C -0.110 4.110 28 C -0.123 4.123 29 H 0.061 0.939 30 H 0.078 0.922 31 H 0.077 0.923 32 H 0.403 0.597 33 H 0.145 0.855 34 H 0.140 0.860 35 H 0.155 0.845 36 H 0.154 0.846 37 H 0.098 0.902 38 H 0.388 0.612 39 H -0.251 1.251 40 H -0.251 1.251 41 H 0.140 0.860 42 H 0.065 0.935 43 H 0.074 0.926 44 H 0.070 0.930 45 H 0.075 0.925 46 H 0.377 0.623 47 H 0.074 0.926 48 H 0.078 0.922 49 H 0.077 0.923 50 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.469 -1.521 1.957 5.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.335 5.335 3 C 0.359 3.641 4 O -0.408 6.408 5 C -0.158 4.158 6 C 0.121 3.879 7 O -0.302 6.302 8 C -0.162 4.162 9 C -0.077 4.077 10 C -0.030 4.030 11 C -0.013 4.013 12 C -0.206 4.206 13 C -0.187 4.187 14 C -0.053 4.053 15 C -0.146 4.146 16 O -0.342 6.342 17 Si 0.592 3.408 18 O -0.062 6.062 19 C -0.076 4.076 20 C 0.039 3.961 21 H 0.118 0.882 22 C -0.162 4.162 23 C -0.188 4.188 24 C 0.044 3.956 25 H 0.075 0.925 26 O -0.369 6.369 27 C -0.148 4.148 28 C -0.162 4.162 29 H 0.080 0.920 30 H 0.096 0.904 31 H 0.096 0.904 32 H 0.263 0.737 33 H 0.163 0.837 34 H 0.158 0.842 35 H 0.173 0.827 36 H 0.171 0.829 37 H 0.115 0.885 38 H 0.237 0.763 39 H -0.176 1.176 40 H -0.174 1.174 41 H 0.158 0.842 42 H 0.084 0.916 43 H 0.093 0.907 44 H 0.089 0.911 45 H 0.093 0.907 46 H 0.224 0.776 47 H 0.093 0.907 48 H 0.096 0.904 49 H 0.096 0.904 50 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -3.363 -1.936 1.458 4.145 hybrid contribution -0.236 0.734 -0.700 1.041 sum -3.599 -1.203 0.758 3.870 Atomic orbital electron populations 1.22054 0.79316 1.03880 1.02312 1.47769 1.07227 1.05506 1.73001 1.18039 0.86928 0.83255 0.75877 1.90778 1.13438 1.87066 1.49475 1.20172 0.99323 0.96566 0.99710 1.18483 0.90032 0.91050 0.88355 1.84677 1.17380 1.85021 1.43084 1.21329 0.97268 0.96653 1.00935 1.21089 0.95360 0.98439 0.92765 1.17574 0.93802 0.95227 0.96423 1.20231 0.97196 0.90097 0.93800 1.21837 0.97319 0.99201 1.02232 1.21518 1.02175 0.96735 0.98286 1.21253 0.90924 0.94694 0.98390 1.23787 0.99966 1.06618 0.84184 1.86575 1.73699 1.53838 1.20051 0.94609 0.81324 0.75995 0.88900 1.83906 1.38252 1.42368 1.41674 1.21392 0.92360 0.96471 0.97332 1.21149 0.97935 0.81880 0.95104 0.88167 1.21777 1.01442 0.95473 0.97475 1.22221 1.01364 0.96668 0.98549 1.21800 0.82150 0.96799 0.94842 0.92482 1.86514 1.23117 1.77725 1.49531 1.21505 1.00324 0.95581 0.97387 1.21773 1.01878 0.95325 0.97206 0.92010 0.90380 0.90404 0.73750 0.83715 0.84220 0.82723 0.82862 0.88479 0.76296 1.17575 1.17434 0.84190 0.91594 0.90714 0.91144 0.90654 0.77626 0.90732 0.90377 0.90443 0.91708 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.05 8.16 59.85 0.49 0.43 16 2 N -0.60 -1.02 2.76 -175.15 -0.48 -1.50 16 3 C 0.57 2.24 6.93 -12.46 -0.09 2.16 16 4 O -0.53 -3.65 15.89 -3.74 -0.06 -3.71 16 5 C -0.15 -0.36 4.89 -104.90 -0.51 -0.87 16 6 C 0.17 0.29 6.70 -38.63 -0.26 0.03 16 7 O -0.49 -1.00 12.54 -27.68 -0.35 -1.34 16 8 C -0.14 0.04 9.96 -39.54 -0.39 -0.35 16 9 C -0.06 0.04 9.54 -39.15 -0.37 -0.34 16 10 C -0.03 -0.03 5.87 -105.03 -0.62 -0.64 16 11 C 0.04 0.06 7.03 -36.49 -0.26 -0.20 16 12 C -0.19 -0.15 10.26 -39.38 -0.40 -0.56 16 13 C -0.17 -0.23 10.78 -39.80 -0.43 -0.66 16 14 C 0.00 -0.01 6.24 -35.56 -0.22 -0.23 16 15 C -0.04 0.02 2.97 36.00 0.11 0.12 16 16 O -0.53 -0.31 12.86 -35.23 -0.45 -0.76 16 17 Si 0.69 -0.56 32.11 -169.99 -5.46 -6.02 16 18 O -0.16 -0.37 8.80 4.60 0.04 -0.33 16 19 C -0.06 -0.07 7.27 -38.78 -0.28 -0.35 16 20 C 0.14 0.18 2.52 -67.93 -0.17 0.01 16 21 H 0.10 0.32 6.91 -51.93 -0.36 -0.04 16 22 C -0.12 0.01 5.03 -26.73 -0.13 -0.13 16 23 C -0.15 0.19 5.64 -26.73 -0.15 0.04 16 24 C 0.10 -0.10 3.77 -26.73 -0.10 -0.20 16 25 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 26 O -0.56 0.28 11.97 -35.23 -0.42 -0.14 16 27 C -0.11 0.02 5.66 -26.76 -0.15 -0.13 16 28 C -0.12 -0.07 5.06 -26.76 -0.14 -0.21 16 29 H 0.06 -0.11 7.56 -51.93 -0.39 -0.50 16 30 H 0.08 -0.13 6.44 -51.93 -0.33 -0.47 16 31 H 0.08 -0.07 5.69 -51.93 -0.30 -0.37 16 32 H 0.40 -0.43 9.06 45.56 0.41 -0.02 16 33 H 0.15 -0.32 8.06 -52.49 -0.42 -0.74 16 34 H 0.14 -0.41 6.96 -52.49 -0.37 -0.77 16 35 H 0.16 -0.25 7.25 -52.48 -0.38 -0.63 16 36 H 0.15 -0.01 8.06 -52.48 -0.42 -0.43 16 37 H 0.10 -0.29 7.96 -51.93 -0.41 -0.71 16 38 H 0.39 -1.50 8.74 45.56 0.40 -1.10 16 39 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 40 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 41 H 0.14 0.07 6.42 -52.49 -0.34 -0.27 16 42 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.07 -0.03 6.22 -51.93 -0.32 -0.35 16 44 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 45 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 46 H 0.38 -1.47 9.08 45.56 0.41 -1.06 16 47 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 48 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 49 H 0.08 0.07 7.21 -51.93 -0.37 -0.31 16 50 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 LS Contribution 404.01 15.07 6.09 6.09 Total: 0.00 -10.27 404.01 -10.53 -20.80 By element: Atomic # 1 Polarization: -5.67 SS G_CDS: -5.35 Total: -11.02 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -4.08 Total: -2.06 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -0.48 Total: -1.50 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -1.24 Total: -6.28 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.46 Total: -6.02 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -10.27 -10.53 -20.80 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.968 kcal (2) G-P(sol) polarization free energy of solvation -10.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.238 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.529 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.767 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds