Wall clock time and date at job start Sun Mar 7 2021 05:39:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34772 * 120.00292 * 2 1 4 4 O 1.21586 * 119.99974 * 184.43376 * 3 2 1 5 5 C 1.47564 * 119.99794 * 4.16511 * 3 2 1 6 6 C 1.40213 * 120.12148 * 130.61190 * 5 3 2 7 7 O 1.35649 * 119.99908 * 0.02562 * 6 5 3 8 8 C 1.38814 * 119.99462 * 179.76148 * 6 5 3 9 9 C 1.37767 * 120.24509 * 0.51665 * 8 6 5 10 10 C 1.39843 * 120.24631 * 359.73588 * 9 8 6 11 11 C 1.47816 * 120.00345 * 179.97438 * 10 9 8 12 12 C 1.35938 * 125.92886 * 359.74717 * 11 10 9 13 13 C 1.40961 * 106.74048 * 179.85218 * 12 11 10 14 14 C 1.34709 * 107.03290 * 0.40232 * 13 12 11 15 15 C 1.50694 * 125.66938 * 179.77270 * 14 13 12 16 16 O 1.42905 * 109.47124 * 64.99641 * 15 14 13 17 17 Si 1.86296 * 109.47482 * 184.99972 * 15 14 13 18 18 O 1.34339 * 108.66433 * 359.74852 * 14 13 12 19 19 C 1.39176 * 119.99875 * 0.02562 * 10 9 8 20 20 C 1.46508 * 119.99528 * 180.02562 * 2 1 3 21 21 H 1.08998 * 109.46689 * 179.97438 * 20 2 1 22 22 C 1.52994 * 109.47126 * 299.99975 * 20 2 1 23 23 C 1.53001 * 109.46838 * 179.97438 * 22 20 2 24 24 C 1.53000 * 109.47145 * 300.00043 * 23 22 20 25 25 H 1.08999 * 109.46799 * 180.02562 * 24 23 22 26 26 O 1.42901 * 109.47019 * 299.99944 * 24 23 22 27 27 C 1.52994 * 109.47287 * 60.00232 * 24 23 22 28 28 C 1.53000 * 109.46967 * 60.00086 * 20 2 1 29 29 H 1.08998 * 109.47185 * 93.14408 * 1 2 3 30 30 H 1.09000 * 109.47267 * 213.14772 * 1 2 3 31 31 H 1.08997 * 109.46783 * 333.15233 * 1 2 3 32 32 H 0.96704 * 114.00238 * 90.00000 * 7 6 5 33 33 H 1.08000 * 119.87788 * 180.27700 * 8 6 5 34 34 H 1.08001 * 119.88016 * 179.76039 * 9 8 6 35 35 H 1.08006 * 126.62452 * 359.97438 * 12 11 10 36 36 H 1.08004 * 126.48441 * 180.15311 * 13 12 11 37 37 H 1.09005 * 109.47122 * 305.00163 * 15 14 13 38 38 H 0.96703 * 113.99728 * 179.97438 * 16 15 14 39 39 H 1.48497 * 110.00392 * 178.67759 * 17 15 14 40 40 H 1.48507 * 110.00015 * 300.00236 * 17 15 14 41 41 H 1.07999 * 120.12168 * 179.97438 * 19 10 9 42 42 H 1.08996 * 109.47232 * 299.99804 * 22 20 2 43 43 H 1.09005 * 109.47014 * 60.00350 * 22 20 2 44 44 H 1.08999 * 109.46795 * 180.02562 * 23 22 20 45 45 H 1.09005 * 109.46999 * 60.00381 * 23 22 20 46 46 H 0.96700 * 114.00233 * 299.99609 * 26 24 23 47 47 H 1.08999 * 109.47697 * 179.97438 * 27 24 23 48 48 H 1.09005 * 109.47014 * 59.99564 * 27 24 23 49 49 H 1.08999 * 109.47716 * 300.00139 * 28 20 2 50 50 H 1.08999 * 109.47271 * 60.00051 * 28 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 3.3521 1.1686 -0.0814 5 6 1.4041 2.4434 0.0928 6 6 1.7943 3.4138 1.0267 7 8 2.8495 3.1804 1.8465 8 6 1.1043 4.6154 1.1083 9 6 0.0287 4.8555 0.2816 10 6 -0.3726 3.8927 -0.6498 11 6 -1.5278 4.1558 -1.5337 12 6 -2.2861 5.2840 -1.5409 13 6 -3.2676 5.1071 -2.5371 14 6 -3.0673 3.8891 -3.0766 15 6 -3.8869 3.2712 -4.1799 16 8 -3.7244 4.0330 -5.3780 17 14 -3.3153 1.5226 -4.4735 18 8 -2.0152 3.3171 -2.4679 19 6 0.3150 2.6864 -0.7438 20 6 2.1975 -1.2689 -0.0006 21 1 3.2691 -1.0697 -0.0009 22 6 1.8278 -2.0717 1.2483 23 6 2.5922 -3.3970 1.2473 24 6 2.2220 -4.1984 -0.0023 25 1 2.7663 -5.1428 -0.0027 26 8 0.8169 -4.4589 -0.0021 27 6 2.5916 -3.3956 -1.2512 28 6 1.8278 -2.0705 -1.2502 29 1 -0.3633 -0.0564 -1.0261 30 1 -0.3634 -0.8604 0.5619 31 1 -0.3633 0.9169 0.4641 32 1 3.6991 3.4696 1.4863 33 1 1.4093 5.3634 1.8253 34 1 -0.5064 5.7910 0.3529 35 1 -2.1596 6.1494 -0.9072 36 1 -4.0373 5.8129 -2.8128 37 1 -4.9384 3.2663 -3.8923 38 1 -4.2245 3.6917 -6.1320 39 1 -4.1369 0.8914 -5.5374 40 1 -1.8831 1.5155 -4.8662 41 1 0.0065 1.9412 -1.4621 42 1 2.0912 -1.5005 2.1385 43 1 0.7561 -2.2708 1.2481 44 1 2.3285 -3.9691 2.1368 45 1 3.6640 -3.1982 1.2472 46 1 0.5109 -4.9654 0.7627 47 1 2.3283 -3.9667 -2.1415 48 1 3.6634 -3.1969 -1.2513 49 1 0.7561 -2.2696 -1.2504 50 1 2.0911 -1.4986 -2.1399 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:50 Heat of formation + Delta-G solvation = -104.703899 kcal Electronic energy + Delta-G solvation = -35032.684928 eV Core-core repulsion = 30379.689579 eV Total energy + Delta-G solvation = -4652.995349 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.70088 -41.91058 -40.52369 -39.36786 -38.18463 -37.90144 -37.04482 -35.07712 -34.18989 -32.87219 -32.50327 -31.87086 -30.22574 -29.85905 -28.00552 -26.35555 -25.40440 -23.84437 -23.68995 -23.31510 -22.49301 -21.48009 -20.85470 -20.48430 -19.36537 -18.86840 -18.78008 -18.15665 -17.59579 -17.57784 -17.11781 -17.05282 -16.68100 -16.61113 -16.13949 -16.03833 -15.80345 -15.62089 -15.18130 -14.86870 -14.56778 -14.45153 -14.28783 -14.16608 -14.13569 -14.07204 -13.92902 -13.74827 -13.33135 -13.28209 -13.24218 -13.09381 -13.04305 -12.96225 -12.82472 -12.41690 -12.15047 -12.08997 -11.90296 -11.49531 -11.27928 -11.08698 -11.02659 -10.70694 -10.68319 -10.44145 -10.19630 -9.76885 -8.91036 -5.00581 -0.55071 -0.14874 0.74771 1.13230 1.37351 1.43248 1.60123 1.71797 1.84722 1.91228 2.49877 3.06356 3.15601 3.28205 3.38400 3.55600 3.64290 3.67859 3.72484 3.80234 3.93268 4.00030 4.02557 4.06150 4.11999 4.18042 4.20200 4.32586 4.34495 4.39521 4.43394 4.46139 4.53300 4.61531 4.63193 4.68739 4.76782 4.80406 4.87960 4.90078 4.95454 5.01509 5.03980 5.08932 5.11893 5.12976 5.19539 5.24451 5.35224 5.44432 5.46947 5.50582 6.01317 6.17827 6.50212 6.60187 6.91748 6.94122 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.601 5.601 3 C 0.563 3.437 4 O -0.573 6.573 5 C -0.170 4.170 6 C 0.154 3.846 7 O -0.504 6.504 8 C -0.138 4.138 9 C -0.049 4.049 10 C -0.036 4.036 11 C 0.020 3.980 12 C -0.185 4.185 13 C -0.179 4.179 14 C -0.020 4.020 15 C -0.039 4.039 16 O -0.555 6.555 17 Si 0.758 3.242 18 O -0.179 6.179 19 C -0.059 4.059 20 C 0.141 3.859 21 H 0.076 0.924 22 C -0.116 4.116 23 C -0.146 4.146 24 C 0.107 3.893 25 H 0.068 0.932 26 O -0.577 6.577 27 C -0.113 4.113 28 C -0.115 4.115 29 H 0.071 0.929 30 H 0.091 0.909 31 H 0.080 0.920 32 H 0.413 0.587 33 H 0.168 0.832 34 H 0.169 0.831 35 H 0.180 0.820 36 H 0.166 0.834 37 H 0.130 0.870 38 H 0.405 0.595 39 H -0.262 1.262 40 H -0.313 1.313 41 H 0.139 0.861 42 H 0.054 0.946 43 H 0.082 0.918 44 H 0.086 0.914 45 H 0.071 0.929 46 H 0.392 0.608 47 H 0.073 0.927 48 H 0.079 0.921 49 H 0.078 0.922 50 H 0.050 0.950 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.345 -1.015 2.678 6.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.331 5.331 3 C 0.352 3.648 4 O -0.453 6.453 5 C -0.173 4.173 6 C 0.107 3.893 7 O -0.318 6.318 8 C -0.156 4.156 9 C -0.066 4.066 10 C -0.036 4.036 11 C -0.029 4.029 12 C -0.204 4.204 13 C -0.198 4.198 14 C -0.069 4.069 15 C -0.148 4.148 16 O -0.367 6.367 17 Si 0.663 3.337 18 O -0.077 6.077 19 C -0.077 4.077 20 C 0.038 3.962 21 H 0.094 0.906 22 C -0.154 4.154 23 C -0.184 4.184 24 C 0.048 3.952 25 H 0.086 0.914 26 O -0.385 6.385 27 C -0.151 4.151 28 C -0.154 4.154 29 H 0.089 0.911 30 H 0.109 0.891 31 H 0.099 0.901 32 H 0.273 0.727 33 H 0.185 0.815 34 H 0.186 0.814 35 H 0.197 0.803 36 H 0.184 0.816 37 H 0.147 0.853 38 H 0.257 0.743 39 H -0.187 1.187 40 H -0.241 1.241 41 H 0.157 0.843 42 H 0.073 0.927 43 H 0.100 0.900 44 H 0.104 0.896 45 H 0.090 0.910 46 H 0.241 0.759 47 H 0.092 0.908 48 H 0.098 0.902 49 H 0.097 0.903 50 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -5.301 -1.455 2.186 5.915 hybrid contribution 0.362 0.583 -0.984 1.199 sum -4.939 -0.872 1.202 5.157 Atomic orbital electron populations 1.22210 0.77722 1.04615 1.03210 1.47904 1.08278 1.05157 1.71777 1.18421 0.86664 0.84354 0.75395 1.90737 1.15107 1.87745 1.51717 1.20128 1.00003 0.96224 1.00950 1.18736 0.90297 0.91754 0.88464 1.84637 1.18135 1.85424 1.43555 1.21546 0.96786 0.96127 1.01109 1.21406 0.94838 0.98939 0.91459 1.17702 0.93712 0.95359 0.96812 1.20459 0.97739 0.90570 0.94144 1.22172 0.96578 0.99508 1.02099 1.21802 1.02696 0.96869 0.98431 1.21742 0.90951 0.95285 0.98949 1.23969 1.01400 1.05795 0.83601 1.86525 1.74553 1.54513 1.21081 0.93854 0.76594 0.75449 0.87825 1.83899 1.38685 1.43015 1.42107 1.21359 0.92243 0.96978 0.97141 1.21155 0.96673 0.82029 0.96305 0.90588 1.21711 1.02010 0.95720 0.95977 1.22208 1.00946 0.96019 0.99234 1.21746 0.82285 0.97020 0.94130 0.91382 1.86477 1.23153 1.78176 1.50706 1.21543 1.00351 0.95141 0.98089 1.21683 1.01960 0.95549 0.96192 0.91079 0.89063 0.90141 0.72686 0.81493 0.81376 0.80316 0.81635 0.85271 0.74268 1.18739 1.24095 0.84336 0.92736 0.89971 0.89554 0.91017 0.75878 0.90847 0.90227 0.90340 0.93080 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.04 8.16 127.77 1.04 1.01 16 2 N -0.60 -3.25 2.76 -826.32 -2.28 -5.54 16 3 C 0.56 5.89 6.93 86.70 0.60 6.49 16 4 O -0.57 -9.80 15.89 4.65 0.07 -9.73 16 5 C -0.17 -1.08 4.89 -20.04 -0.10 -1.18 16 6 C 0.15 0.68 6.70 22.89 0.15 0.83 16 7 O -0.50 -2.79 12.54 -81.00 -1.02 -3.81 16 8 C -0.14 0.17 9.96 22.30 0.22 0.39 16 9 C -0.05 0.12 9.54 22.55 0.22 0.33 16 10 C -0.04 -0.06 5.87 -20.13 -0.12 -0.18 16 11 C 0.02 0.06 7.03 24.27 0.17 0.23 16 12 C -0.18 -0.09 10.26 22.40 0.23 0.14 16 13 C -0.18 -0.33 10.78 22.13 0.24 -0.09 16 14 C -0.02 -0.06 6.24 24.87 0.16 0.09 16 15 C -0.04 0.06 2.97 71.23 0.21 0.27 16 16 O -0.55 -0.42 12.86 -148.98 -1.92 -2.34 16 17 Si 0.76 -0.79 32.11 68.60 2.20 1.41 16 18 O -0.18 -0.91 8.80 -6.47 -0.06 -0.97 16 19 C -0.06 -0.22 7.27 22.79 0.17 -0.05 16 20 C 0.14 0.64 2.52 44.99 0.11 0.75 16 21 H 0.08 0.73 6.91 -2.39 -0.02 0.71 16 22 C -0.12 -0.08 5.03 30.59 0.15 0.07 16 23 C -0.15 0.35 5.64 30.59 0.17 0.52 16 24 C 0.11 -0.22 3.77 30.59 0.12 -0.10 16 25 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 26 O -0.58 0.93 11.97 -148.98 -1.78 -0.85 16 27 C -0.11 -0.06 5.66 30.58 0.17 0.11 16 28 C -0.12 -0.32 5.06 30.58 0.15 -0.17 16 29 H 0.07 -0.17 7.56 -2.39 -0.02 -0.19 16 30 H 0.09 -0.30 6.44 -2.39 -0.02 -0.31 16 31 H 0.08 -0.06 5.69 -2.39 -0.01 -0.08 16 32 H 0.41 -0.09 9.06 -74.05 -0.67 -0.76 16 33 H 0.17 -1.00 8.06 -2.91 -0.02 -1.02 16 34 H 0.17 -1.42 6.96 -2.91 -0.02 -1.45 16 35 H 0.18 -0.99 7.25 -2.91 -0.02 -1.01 16 36 H 0.17 -0.24 8.06 -2.91 -0.02 -0.26 16 37 H 0.13 -1.03 7.96 -2.38 -0.02 -1.05 16 38 H 0.40 -3.38 8.74 -74.06 -0.65 -4.03 16 39 H -0.26 -0.14 7.11 99.48 0.71 0.57 16 40 H -0.31 -2.94 7.11 99.48 0.71 -2.23 16 41 H 0.14 0.42 6.42 -2.91 -0.02 0.40 16 42 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 43 H 0.08 -0.06 6.22 -2.38 -0.01 -0.08 16 44 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 45 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 46 H 0.39 -3.47 9.08 -74.06 -0.67 -4.15 16 47 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 48 H 0.08 0.00 8.14 -2.38 -0.02 -0.02 16 49 H 0.08 0.21 7.21 -2.39 -0.02 0.19 16 50 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 Total: 0.00 -25.90 404.01 -1.64 -27.54 By element: Atomic # 1 Polarization: -14.26 SS G_CDS: -0.93 Total: -15.19 kcal Atomic # 6 Polarization: 5.39 SS G_CDS: 4.07 Total: 9.47 kcal Atomic # 7 Polarization: -3.25 SS G_CDS: -2.28 Total: -5.54 kcal Atomic # 8 Polarization: -12.99 SS G_CDS: -4.70 Total: -17.69 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: 2.20 Total: 1.41 kcal Total: -25.90 -1.64 -27.54 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.168 kcal (2) G-P(sol) polarization free energy of solvation -25.897 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.066 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.638 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.535 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds