Wall clock time and date at job start Sun Mar 7 2021 05:39:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.34768 * 120.00053 * 2 1 4 4 O 1.21586 * 120.00104 * 186.94255 * 3 2 1 5 5 C 1.47654 * 120.00047 * 6.94032 * 3 2 1 6 6 C 1.40163 * 119.97523 * 20.82520 * 5 3 2 7 7 C 1.36355 * 120.67081 * 179.97438 * 6 5 3 8 8 C 1.39325 * 120.23896 * 0.02562 * 7 6 5 9 9 N 1.37398 * 133.25812 * 179.97438 * 8 7 6 10 10 C 1.36860 * 109.98549 * 180.02562 * 9 8 7 11 11 C 1.34197 * 109.96529 * 0.02562 * 10 9 8 12 12 C 1.50697 * 126.54141 * 179.97438 * 11 10 9 13 13 O 1.42902 * 109.47310 * 254.97767 * 12 11 10 14 14 Si 1.86311 * 109.47119 * 14.97461 * 12 11 10 15 15 C 1.40903 * 119.63685 * 359.97438 * 8 7 6 16 16 C 1.39195 * 119.97136 * 200.54708 * 5 3 2 17 17 C 1.46503 * 119.99749 * 180.02562 * 2 1 3 18 18 H 1.08998 * 109.46987 * 180.02562 * 17 2 1 19 19 C 1.53003 * 109.46858 * 299.99757 * 17 2 1 20 20 C 1.53007 * 109.47036 * 180.02562 * 19 17 2 21 21 C 1.52995 * 109.47120 * 300.00154 * 20 19 17 22 22 H 1.08999 * 109.47436 * 179.97438 * 21 20 19 23 23 O 1.42905 * 109.47144 * 299.99847 * 21 20 19 24 24 C 1.53003 * 109.47085 * 59.99671 * 21 20 19 25 25 C 1.52997 * 109.47413 * 299.99751 * 24 21 20 26 26 H 1.09000 * 109.47044 * 267.79402 * 1 2 3 27 27 H 1.08999 * 109.46735 * 27.79560 * 1 2 3 28 28 H 1.08997 * 109.47354 * 147.79519 * 1 2 3 29 29 H 1.08004 * 119.66393 * 359.97438 * 6 5 3 30 30 H 1.08005 * 119.87550 * 180.02562 * 7 6 5 31 31 H 0.97004 * 125.01144 * 0.02661 * 9 8 7 32 32 H 1.08001 * 125.02179 * 179.97438 * 10 9 8 33 33 H 1.08998 * 109.47155 * 134.97148 * 12 11 10 34 34 H 0.96700 * 113.99693 * 60.00165 * 13 12 11 35 35 H 1.48503 * 109.99686 * 58.68188 * 14 12 11 36 36 H 1.48499 * 110.00021 * 179.97438 * 14 12 11 37 37 H 1.07997 * 120.30626 * 359.97438 * 16 5 3 38 38 H 1.08998 * 109.47108 * 60.00336 * 19 17 2 39 39 H 1.08998 * 109.47250 * 300.00114 * 19 17 2 40 40 H 1.08990 * 109.46914 * 179.97438 * 20 19 17 41 41 H 1.09008 * 109.46632 * 59.99724 * 20 19 17 42 42 H 0.96700 * 113.99714 * 300.00016 * 23 21 20 43 43 H 1.09003 * 109.47380 * 60.00674 * 24 21 20 44 44 H 1.09010 * 109.46648 * 179.97438 * 24 21 20 45 45 H 1.09002 * 109.47418 * 179.97438 * 25 24 21 46 46 H 1.08998 * 109.47347 * 300.00094 * 25 24 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 3.3481 1.1710 -0.1273 5 6 1.4088 2.4412 0.1545 6 6 0.1284 2.4499 0.7249 7 6 -0.5583 3.6183 0.8748 8 6 0.0069 4.8225 0.4605 9 7 -0.4313 6.1245 0.4809 10 6 0.5217 6.9472 -0.0558 11 6 1.5880 6.2264 -0.4358 12 6 2.8482 6.7550 -1.0710 13 8 2.8479 6.4391 -2.4647 14 14 2.9250 8.6038 -0.8535 15 6 1.2933 4.8271 -0.1143 16 6 1.9949 3.6333 -0.2610 17 6 2.1975 -1.2688 -0.0006 18 1 3.2691 -1.0696 0.0000 19 6 1.8278 -2.0716 1.2484 20 6 2.5933 -3.3964 1.2482 21 6 2.2242 -4.1984 -0.0014 22 1 2.7698 -5.1420 -0.0018 23 8 0.8193 -4.4600 -0.0018 24 6 2.5938 -3.3955 -1.2503 25 6 1.8283 -2.0708 -1.2501 26 1 -0.3633 -0.0396 1.0269 27 1 -0.3633 0.9091 -0.4792 28 1 -0.3634 -0.8695 -0.5477 29 1 -0.3187 1.5216 1.0489 30 1 -1.5439 3.6101 1.3163 31 1 -1.2896 6.4176 0.8250 32 1 0.4290 8.0183 -0.1591 33 1 3.7149 6.2969 -0.5946 34 1 2.1029 6.8151 -2.9530 35 1 2.8937 8.9470 0.5910 36 1 4.1636 9.1373 -1.4751 37 1 2.9831 3.6320 -0.6965 38 1 0.7562 -2.2707 1.2483 39 1 2.0912 -1.5004 2.1386 40 1 2.3303 -3.9680 2.1381 41 1 3.6649 -3.1968 1.2484 42 1 0.5134 -4.9665 0.7631 43 1 3.6654 -3.1961 -1.2501 44 1 2.3312 -3.9672 -2.1405 45 1 2.0920 -1.4987 -2.1396 46 1 0.7568 -2.2704 -1.2504 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:55 Heat of formation + Delta-G solvation = -34.315054 kcal Electronic energy + Delta-G solvation = -28773.900632 eV Core-core repulsion = 24824.122186 eV Total energy + Delta-G solvation = -3949.778446 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.49391 -41.30358 -39.73647 -37.90342 -37.40751 -36.99382 -34.90796 -33.23829 -31.83220 -31.25295 -30.68966 -29.42324 -28.02650 -26.43269 -24.96942 -23.75851 -23.36008 -22.80861 -21.09613 -20.62592 -20.18109 -19.17304 -18.44169 -17.77442 -17.53301 -17.31480 -16.87079 -16.63757 -16.21388 -16.04269 -15.70803 -15.56419 -15.34617 -15.12682 -14.78496 -14.72244 -14.47553 -14.30824 -14.07214 -13.98881 -13.79151 -13.56393 -13.31149 -13.21434 -13.04012 -12.77037 -12.41100 -12.34269 -12.24930 -12.08618 -11.99919 -11.75520 -11.36616 -11.22041 -10.83754 -10.73334 -10.59970 -10.30136 -9.55723 -9.25226 -8.78060 -5.07125 0.00208 0.25032 1.32310 1.50204 1.66821 1.97528 2.01041 2.01871 2.06355 2.96577 3.28492 3.54049 3.60071 3.66146 3.72190 3.76081 3.81838 3.83916 3.97049 4.04533 4.10624 4.20058 4.22062 4.34117 4.42504 4.44150 4.48511 4.51376 4.52242 4.56791 4.61474 4.66618 4.73579 4.82135 4.90976 4.94726 5.04331 5.07153 5.14637 5.17475 5.28619 5.31982 5.40396 5.44725 5.52872 5.63494 5.70586 6.02959 6.39159 6.48543 6.69290 6.70689 7.33354 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.608 5.608 3 C 0.565 3.435 4 O -0.539 6.539 5 C -0.167 4.167 6 C -0.089 4.089 7 C -0.138 4.138 8 C 0.118 3.882 9 N -0.586 5.586 10 C 0.060 3.940 11 C -0.192 4.192 12 C -0.034 4.034 13 O -0.540 6.540 14 Si 0.688 3.312 15 C -0.104 4.104 16 C 0.005 3.995 17 C 0.141 3.859 18 H 0.100 0.900 19 C -0.122 4.122 20 C -0.150 4.150 21 C 0.103 3.897 22 H 0.057 0.943 23 O -0.563 6.563 24 C -0.110 4.110 25 C -0.124 4.124 26 H 0.062 0.938 27 H 0.087 0.913 28 H 0.075 0.925 29 H 0.153 0.847 30 H 0.127 0.873 31 H 0.421 0.579 32 H 0.178 0.822 33 H 0.112 0.888 34 H 0.376 0.624 35 H -0.256 1.256 36 H -0.254 1.254 37 H 0.135 0.865 38 H 0.073 0.927 39 H 0.064 0.936 40 H 0.069 0.931 41 H 0.075 0.925 42 H 0.376 0.624 43 H 0.078 0.922 44 H 0.074 0.926 45 H 0.065 0.935 46 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.193 1.175 1.438 7.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.340 5.340 3 C 0.356 3.644 4 O -0.416 6.416 5 C -0.171 4.171 6 C -0.108 4.108 7 C -0.159 4.159 8 C 0.010 3.990 9 N -0.188 5.188 10 C -0.066 4.066 11 C -0.200 4.200 12 C -0.146 4.146 13 O -0.345 6.345 14 Si 0.589 3.411 15 C -0.109 4.109 16 C -0.014 4.014 17 C 0.039 3.961 18 H 0.118 0.882 19 C -0.161 4.161 20 C -0.188 4.188 21 C 0.044 3.956 22 H 0.075 0.925 23 O -0.369 6.369 24 C -0.148 4.148 25 C -0.162 4.162 26 H 0.080 0.920 27 H 0.105 0.895 28 H 0.093 0.907 29 H 0.170 0.830 30 H 0.145 0.855 31 H 0.258 0.742 32 H 0.195 0.805 33 H 0.130 0.870 34 H 0.223 0.777 35 H -0.181 1.181 36 H -0.179 1.179 37 H 0.153 0.847 38 H 0.092 0.908 39 H 0.083 0.917 40 H 0.088 0.912 41 H 0.093 0.907 42 H 0.223 0.777 43 H 0.097 0.903 44 H 0.092 0.908 45 H 0.084 0.916 46 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -5.619 1.963 1.347 6.103 hybrid contribution -0.415 -0.739 1.071 1.366 sum -6.035 1.224 2.418 6.615 Atomic orbital electron populations 1.22398 0.79976 1.04037 1.01400 1.47692 1.06867 1.05576 1.73871 1.18292 0.86874 0.83442 0.75839 1.90779 1.14059 1.87062 1.49735 1.19507 0.96279 0.93084 1.08221 1.21612 0.93252 0.98827 0.97094 1.19726 1.01201 0.89375 1.05557 1.18474 0.94574 0.85437 1.00543 1.41731 1.17997 1.04950 1.54164 1.21665 0.88933 0.96164 0.99841 1.20749 0.97975 0.91881 1.09377 1.24412 0.95855 1.10740 0.83568 1.86534 1.51333 1.78601 1.18018 0.95354 0.87574 0.75754 0.82410 1.18905 0.94301 0.93160 1.04506 1.20670 0.98632 0.89022 0.93126 1.21126 0.98022 0.82078 0.94921 0.88200 1.21775 1.01352 0.95436 0.97511 1.22222 1.01391 0.96727 0.98508 1.21802 0.82100 0.96789 0.94886 0.92504 1.86516 1.23192 1.77711 1.49491 1.21519 1.00367 0.95610 0.97321 1.21783 1.01680 0.95340 0.97404 0.92017 0.89499 0.90661 0.83008 0.85522 0.74164 0.80508 0.87044 0.77679 1.18104 1.17871 0.84710 0.90846 0.91745 0.91216 0.90658 0.77669 0.90340 0.90761 0.91584 0.90553 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.08 7.71 59.85 0.46 0.38 16 2 N -0.61 -1.17 2.76 -175.11 -0.48 -1.65 16 3 C 0.57 2.72 7.51 -12.42 -0.09 2.62 16 4 O -0.54 -4.55 15.87 5.29 0.08 -4.47 16 5 C -0.17 -0.56 5.55 -104.98 -0.58 -1.15 16 6 C -0.09 -0.05 7.54 -39.54 -0.30 -0.35 16 7 C -0.14 0.01 10.00 -39.86 -0.40 -0.39 16 8 C 0.12 0.12 7.27 -83.96 -0.61 -0.49 16 9 N -0.59 1.00 6.05 -10.61 -0.06 0.94 16 10 C 0.06 -0.10 10.43 -16.73 -0.17 -0.28 16 11 C -0.19 -0.18 5.58 -102.69 -0.57 -0.75 16 12 C -0.03 -0.03 3.06 36.00 0.11 0.08 16 13 O -0.54 -0.78 12.88 -35.23 -0.45 -1.23 16 14 Si 0.69 -0.85 30.76 -169.99 -5.23 -6.08 16 15 C -0.10 -0.31 6.34 -105.16 -0.67 -0.97 16 16 C 0.00 0.02 9.64 -38.86 -0.37 -0.35 16 17 C 0.14 0.23 2.52 -67.93 -0.17 0.06 16 18 H 0.10 0.38 6.92 -51.93 -0.36 0.02 16 19 C -0.12 0.00 5.06 -26.73 -0.14 -0.14 16 20 C -0.15 0.15 5.64 -26.73 -0.15 0.00 16 21 C 0.10 -0.07 3.77 -26.73 -0.10 -0.17 16 22 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 23 O -0.56 0.13 11.97 -35.23 -0.42 -0.30 16 24 C -0.11 -0.02 5.66 -26.73 -0.15 -0.17 16 25 C -0.12 -0.13 5.03 -26.73 -0.13 -0.26 16 26 H 0.06 -0.17 6.88 -51.93 -0.36 -0.53 16 27 H 0.09 -0.13 5.40 -51.93 -0.28 -0.41 16 28 H 0.07 -0.13 6.43 -51.93 -0.33 -0.46 16 29 H 0.15 -0.27 3.99 -52.48 -0.21 -0.48 16 30 H 0.13 -0.34 8.06 -52.48 -0.42 -0.76 16 31 H 0.42 -2.02 8.96 -40.82 -0.37 -2.39 16 32 H 0.18 -0.96 6.35 -52.49 -0.33 -1.30 16 33 H 0.11 0.23 7.96 -51.93 -0.41 -0.18 16 34 H 0.38 -1.06 8.70 45.56 0.40 -0.66 16 35 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 36 H -0.25 -0.61 7.11 56.52 0.40 -0.20 16 37 H 0.14 0.73 7.78 -52.49 -0.41 0.32 16 38 H 0.07 -0.02 7.21 -51.93 -0.37 -0.40 16 39 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 40 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.07 -0.05 8.14 -51.92 -0.42 -0.48 16 42 H 0.38 -1.39 9.08 45.56 0.41 -0.97 16 43 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.07 0.03 8.14 -51.92 -0.42 -0.39 16 45 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 46 H 0.08 0.09 6.21 -51.93 -0.32 -0.23 16 LS Contribution 359.76 15.07 5.42 5.42 Total: 0.00 -10.53 359.76 -10.72 -21.25 By element: Atomic # 1 Polarization: -6.04 SS G_CDS: -5.53 Total: -11.57 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -4.04 Total: -2.32 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: -0.55 Total: -0.72 kcal Atomic # 8 Polarization: -5.20 SS G_CDS: -0.79 Total: -5.99 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.23 Total: -6.08 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -10.53 -10.72 -21.25 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.062 kcal (2) G-P(sol) polarization free energy of solvation -10.535 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.596 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.719 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.253 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.315 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds