Wall clock time and date at job start Sun Mar 7 2021 05:39:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.34768 * 120.00053 * 2 1 4 4 O 1.21586 * 120.00104 * 186.94255 * 3 2 1 5 5 C 1.47654 * 120.00047 * 6.94032 * 3 2 1 6 6 C 1.40163 * 119.97523 * 20.82520 * 5 3 2 7 7 C 1.36355 * 120.67081 * 179.97438 * 6 5 3 8 8 C 1.39325 * 120.23896 * 0.02562 * 7 6 5 9 9 N 1.37398 * 133.25812 * 179.97438 * 8 7 6 10 10 C 1.36860 * 109.98549 * 180.02562 * 9 8 7 11 11 C 1.34197 * 109.96529 * 0.02562 * 10 9 8 12 12 C 1.50697 * 126.54141 * 179.97438 * 11 10 9 13 13 O 1.42902 * 109.47310 * 254.97767 * 12 11 10 14 14 Si 1.86311 * 109.47119 * 14.97461 * 12 11 10 15 15 C 1.40903 * 119.63685 * 359.97438 * 8 7 6 16 16 C 1.39195 * 119.97136 * 200.54708 * 5 3 2 17 17 C 1.46503 * 119.99749 * 180.02562 * 2 1 3 18 18 H 1.08998 * 109.46987 * 180.02562 * 17 2 1 19 19 C 1.53003 * 109.46858 * 299.99757 * 17 2 1 20 20 C 1.53007 * 109.47036 * 180.02562 * 19 17 2 21 21 C 1.52995 * 109.47120 * 300.00154 * 20 19 17 22 22 H 1.08999 * 109.47436 * 179.97438 * 21 20 19 23 23 O 1.42905 * 109.47144 * 299.99847 * 21 20 19 24 24 C 1.53003 * 109.47085 * 59.99671 * 21 20 19 25 25 C 1.52997 * 109.47413 * 299.99751 * 24 21 20 26 26 H 1.09000 * 109.47044 * 267.79402 * 1 2 3 27 27 H 1.08999 * 109.46735 * 27.79560 * 1 2 3 28 28 H 1.08997 * 109.47354 * 147.79519 * 1 2 3 29 29 H 1.08004 * 119.66393 * 359.97438 * 6 5 3 30 30 H 1.08005 * 119.87550 * 180.02562 * 7 6 5 31 31 H 0.97004 * 125.01144 * 0.02661 * 9 8 7 32 32 H 1.08001 * 125.02179 * 179.97438 * 10 9 8 33 33 H 1.08998 * 109.47155 * 134.97148 * 12 11 10 34 34 H 0.96700 * 113.99693 * 60.00165 * 13 12 11 35 35 H 1.48503 * 109.99686 * 58.68188 * 14 12 11 36 36 H 1.48499 * 110.00021 * 179.97438 * 14 12 11 37 37 H 1.07997 * 120.30626 * 359.97438 * 16 5 3 38 38 H 1.08998 * 109.47108 * 60.00336 * 19 17 2 39 39 H 1.08998 * 109.47250 * 300.00114 * 19 17 2 40 40 H 1.08990 * 109.46914 * 179.97438 * 20 19 17 41 41 H 1.09008 * 109.46632 * 59.99724 * 20 19 17 42 42 H 0.96700 * 113.99714 * 300.00016 * 23 21 20 43 43 H 1.09003 * 109.47380 * 60.00674 * 24 21 20 44 44 H 1.09010 * 109.46648 * 179.97438 * 24 21 20 45 45 H 1.09002 * 109.47418 * 179.97438 * 25 24 21 46 46 H 1.08998 * 109.47347 * 300.00094 * 25 24 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 3.3481 1.1710 -0.1273 5 6 1.4088 2.4412 0.1545 6 6 0.1284 2.4499 0.7249 7 6 -0.5583 3.6183 0.8748 8 6 0.0069 4.8225 0.4605 9 7 -0.4313 6.1245 0.4809 10 6 0.5217 6.9472 -0.0558 11 6 1.5880 6.2264 -0.4358 12 6 2.8482 6.7550 -1.0710 13 8 2.8479 6.4391 -2.4647 14 14 2.9250 8.6038 -0.8535 15 6 1.2933 4.8271 -0.1143 16 6 1.9949 3.6333 -0.2610 17 6 2.1975 -1.2688 -0.0006 18 1 3.2691 -1.0696 0.0000 19 6 1.8278 -2.0716 1.2484 20 6 2.5933 -3.3964 1.2482 21 6 2.2242 -4.1984 -0.0014 22 1 2.7698 -5.1420 -0.0018 23 8 0.8193 -4.4600 -0.0018 24 6 2.5938 -3.3955 -1.2503 25 6 1.8283 -2.0708 -1.2501 26 1 -0.3633 -0.0396 1.0269 27 1 -0.3633 0.9091 -0.4792 28 1 -0.3634 -0.8695 -0.5477 29 1 -0.3187 1.5216 1.0489 30 1 -1.5439 3.6101 1.3163 31 1 -1.2896 6.4176 0.8250 32 1 0.4290 8.0183 -0.1591 33 1 3.7149 6.2969 -0.5946 34 1 2.1029 6.8151 -2.9530 35 1 2.8937 8.9470 0.5910 36 1 4.1636 9.1373 -1.4751 37 1 2.9831 3.6320 -0.6965 38 1 0.7562 -2.2707 1.2483 39 1 2.0912 -1.5004 2.1386 40 1 2.3303 -3.9680 2.1381 41 1 3.6649 -3.1968 1.2484 42 1 0.5134 -4.9665 0.7631 43 1 3.6654 -3.1961 -1.2501 44 1 2.3312 -3.9672 -2.1405 45 1 2.0920 -1.4987 -2.1396 46 1 0.7568 -2.2704 -1.2504 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:54 Heat of formation + Delta-G solvation = -37.730987 kcal Electronic energy + Delta-G solvation = -28774.048758 eV Core-core repulsion = 24824.122186 eV Total energy + Delta-G solvation = -3949.926572 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.51925 -41.47559 -39.81933 -38.00670 -37.49715 -37.15177 -34.96105 -33.27883 -31.86944 -31.31407 -30.75238 -29.46885 -28.10211 -26.45958 -25.08887 -23.79748 -23.39143 -22.86935 -21.16144 -20.65998 -20.30948 -19.19065 -18.52752 -17.86524 -17.59080 -17.38405 -16.94795 -16.71073 -16.34621 -16.12032 -15.69630 -15.61316 -15.40769 -15.15426 -14.90544 -14.79649 -14.49730 -14.43237 -14.13015 -14.05952 -13.86571 -13.65437 -13.32684 -13.24773 -13.07283 -12.82830 -12.51614 -12.38996 -12.31768 -12.10524 -12.06997 -11.83087 -11.46536 -11.29729 -10.99709 -10.79240 -10.68662 -10.33997 -9.75360 -9.30757 -8.79654 -5.02221 -0.16734 0.20510 1.34428 1.52256 1.69757 1.74066 1.87128 2.02761 2.13630 2.81706 3.38156 3.42408 3.60586 3.65100 3.68483 3.73584 3.83974 3.91491 3.95295 4.04598 4.06993 4.18177 4.25240 4.35206 4.36009 4.42776 4.43623 4.47277 4.54294 4.55544 4.59647 4.63664 4.78422 4.78985 4.90732 4.96320 4.98884 5.01507 5.09774 5.13721 5.24506 5.26657 5.30512 5.36349 5.44778 5.56419 5.58626 5.98696 6.27663 6.61132 6.86466 6.93931 7.03286 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.602 5.602 3 C 0.555 3.445 4 O -0.593 6.593 5 C -0.178 4.178 6 C -0.090 4.090 7 C -0.126 4.126 8 C 0.111 3.889 9 N -0.571 5.571 10 C 0.088 3.912 11 C -0.228 4.228 12 C -0.055 4.055 13 O -0.565 6.565 14 Si 0.816 3.184 15 C -0.130 4.130 16 C -0.027 4.027 17 C 0.139 3.861 18 H 0.069 0.931 19 C -0.114 4.114 20 C -0.147 4.147 21 C 0.108 3.892 22 H 0.067 0.933 23 O -0.576 6.576 24 C -0.114 4.114 25 C -0.115 4.115 26 H 0.088 0.912 27 H 0.092 0.908 28 H 0.085 0.915 29 H 0.178 0.822 30 H 0.164 0.836 31 H 0.440 0.560 32 H 0.222 0.778 33 H 0.080 0.920 34 H 0.394 0.606 35 H -0.280 1.280 36 H -0.308 1.308 37 H 0.100 0.900 38 H 0.085 0.915 39 H 0.056 0.944 40 H 0.087 0.913 41 H 0.068 0.932 42 H 0.392 0.608 43 H 0.076 0.924 44 H 0.073 0.927 45 H 0.048 0.952 46 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.821 1.764 2.713 11.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.332 5.332 3 C 0.347 3.653 4 O -0.476 6.476 5 C -0.182 4.182 6 C -0.109 4.109 7 C -0.146 4.146 8 C 0.001 3.999 9 N -0.175 5.175 10 C -0.039 4.039 11 C -0.235 4.235 12 C -0.164 4.164 13 O -0.373 6.373 14 Si 0.720 3.280 15 C -0.135 4.135 16 C -0.047 4.047 17 C 0.036 3.964 18 H 0.087 0.913 19 C -0.152 4.152 20 C -0.185 4.185 21 C 0.049 3.951 22 H 0.085 0.915 23 O -0.385 6.385 24 C -0.152 4.152 25 C -0.154 4.154 26 H 0.106 0.894 27 H 0.111 0.889 28 H 0.103 0.897 29 H 0.195 0.805 30 H 0.182 0.818 31 H 0.281 0.719 32 H 0.238 0.762 33 H 0.098 0.902 34 H 0.243 0.757 35 H -0.206 1.206 36 H -0.236 1.236 37 H 0.118 0.882 38 H 0.104 0.896 39 H 0.075 0.925 40 H 0.106 0.894 41 H 0.087 0.913 42 H 0.242 0.758 43 H 0.095 0.905 44 H 0.092 0.908 45 H 0.067 0.933 46 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -9.344 2.496 2.630 10.023 hybrid contribution 0.730 -0.939 0.642 1.352 sum -8.614 1.557 3.273 9.346 Atomic orbital electron populations 1.22661 0.77663 1.04838 1.03248 1.47798 1.08314 1.04784 1.72291 1.18707 0.86459 0.84780 0.75394 1.90734 1.16378 1.87874 1.52570 1.19531 0.97626 0.91819 1.09219 1.21842 0.91887 1.00471 0.96701 1.20134 1.02222 0.88371 1.03848 1.18647 0.93869 0.86988 1.00347 1.41772 1.18679 1.03825 1.53196 1.22240 0.87317 0.97681 0.96675 1.20850 0.99280 0.91575 1.11827 1.24785 0.95163 1.13340 0.83064 1.86484 1.52615 1.79447 1.18783 0.94045 0.84420 0.70904 0.78622 1.19211 0.95532 0.93551 1.05194 1.20542 0.97975 0.90783 0.95381 1.21138 0.96532 0.82313 0.96397 0.91255 1.21705 1.02138 0.95496 0.95864 1.22215 1.00864 0.96236 0.99233 1.21723 0.82312 0.96956 0.94093 0.91468 1.86475 1.23090 1.78170 1.50715 1.21554 1.00240 0.95237 0.98170 1.21693 1.01953 0.95483 0.96243 0.89440 0.88931 0.89680 0.80514 0.81833 0.71867 0.76207 0.90190 0.75670 1.20631 1.23618 0.88216 0.89635 0.92523 0.89413 0.91319 0.75840 0.90505 0.90838 0.93330 0.90066 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.17 7.71 127.77 0.99 0.82 16 2 N -0.60 -3.42 2.76 -826.20 -2.28 -5.70 16 3 C 0.56 7.36 7.51 86.73 0.65 8.01 16 4 O -0.59 -13.33 15.87 -3.99 -0.06 -13.39 16 5 C -0.18 -1.69 5.55 -20.09 -0.11 -1.80 16 6 C -0.09 -0.08 7.54 22.30 0.17 0.09 16 7 C -0.13 0.24 10.00 22.09 0.22 0.46 16 8 C 0.11 0.13 7.27 39.19 0.28 0.42 16 9 N -0.57 3.33 6.05 -187.49 -1.13 2.20 16 10 C 0.09 -0.48 10.43 82.99 0.87 0.39 16 11 C -0.23 -0.64 5.58 -18.61 -0.10 -0.74 16 12 C -0.06 -0.21 3.06 71.24 0.22 0.01 16 13 O -0.57 -3.07 12.88 -148.98 -1.92 -4.99 16 14 Si 0.82 -2.08 30.76 68.60 2.11 0.03 16 15 C -0.13 -1.02 6.34 -20.21 -0.13 -1.15 16 16 C -0.03 -0.35 9.64 22.74 0.22 -0.13 16 17 C 0.14 0.75 2.52 44.99 0.11 0.86 16 18 H 0.07 0.81 6.92 -2.39 -0.02 0.79 16 19 C -0.11 -0.05 5.06 30.60 0.15 0.11 16 20 C -0.15 0.30 5.64 30.59 0.17 0.48 16 21 C 0.11 -0.17 3.77 30.59 0.12 -0.06 16 22 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 23 O -0.58 0.91 11.97 -148.98 -1.78 -0.87 16 24 C -0.11 -0.17 5.66 30.59 0.17 0.00 16 25 C -0.12 -0.42 5.03 30.59 0.15 -0.27 16 26 H 0.09 -0.67 6.88 -2.39 -0.02 -0.68 16 27 H 0.09 -0.33 5.40 -2.39 -0.01 -0.34 16 28 H 0.08 -0.37 6.43 -2.39 -0.02 -0.39 16 29 H 0.18 -0.91 3.99 -2.91 -0.01 -0.92 16 30 H 0.16 -1.53 8.06 -2.91 -0.02 -1.56 16 31 H 0.44 -5.83 8.96 -92.71 -0.83 -6.67 16 32 H 0.22 -3.26 6.35 -2.91 -0.02 -3.28 16 33 H 0.08 0.71 7.96 -2.39 -0.02 0.69 16 34 H 0.39 -1.73 8.70 -74.06 -0.64 -2.38 16 35 H -0.28 -0.37 7.11 99.48 0.71 0.34 16 36 H -0.31 -1.93 7.11 99.48 0.71 -1.22 16 37 H 0.10 1.81 7.78 -2.91 -0.02 1.79 16 38 H 0.09 -0.15 7.21 -2.39 -0.02 -0.17 16 39 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 40 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 41 H 0.07 -0.03 8.14 -2.38 -0.02 -0.05 16 42 H 0.39 -3.54 9.08 -74.06 -0.67 -4.21 16 43 H 0.08 0.12 8.14 -2.39 -0.02 0.10 16 44 H 0.07 0.12 8.14 -2.38 -0.02 0.10 16 45 H 0.05 0.33 8.14 -2.39 -0.02 0.31 16 46 H 0.08 0.22 6.21 -2.39 -0.01 0.20 16 Total: 0.00 -31.42 359.76 -1.98 -33.40 By element: Atomic # 1 Polarization: -17.11 SS G_CDS: -1.06 Total: -18.17 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: 4.15 Total: 7.50 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -3.42 Total: -3.50 kcal Atomic # 8 Polarization: -15.49 SS G_CDS: -3.77 Total: -19.26 kcal Atomic # 14 Polarization: -2.08 SS G_CDS: 2.11 Total: 0.03 kcal Total: -31.42 -1.98 -33.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.332 kcal (2) G-P(sol) polarization free energy of solvation -31.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.399 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds