Wall clock time and date at job start Sun Mar 7 2021 05:39:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34770 * 120.00270 * 2 1 4 4 O 1.21515 * 120.00384 * 182.10099 * 3 2 1 5 5 C 1.48179 * 119.99876 * 2.10785 * 3 2 1 6 6 N 1.32713 * 119.72067 * 352.77825 * 5 3 2 7 7 C 1.31522 * 121.64023 * 180.02562 * 6 5 3 8 8 C 1.38555 * 120.90215 * 0.27317 * 7 6 5 9 9 C 1.50705 * 120.32424 * 179.70121 * 8 7 6 10 10 O 1.42903 * 109.47206 * 120.00255 * 9 8 7 11 11 Si 1.86300 * 109.46922 * 0.02562 * 9 8 7 12 12 C 1.38625 * 119.35292 * 359.45984 * 8 7 6 13 13 C 1.38588 * 118.48933 * 0.52589 * 12 8 7 14 14 C 1.46500 * 119.99880 * 180.02562 * 2 1 3 15 15 H 1.08991 * 109.47396 * 180.02562 * 14 2 1 16 16 C 1.53001 * 109.47290 * 300.00287 * 14 2 1 17 17 C 1.53003 * 109.47473 * 180.02562 * 16 14 2 18 18 C 1.52999 * 109.46924 * 299.99666 * 17 16 14 19 19 H 1.08999 * 109.47362 * 180.02562 * 18 17 16 20 20 O 1.42908 * 109.47363 * 300.00258 * 18 17 16 21 21 C 1.53008 * 109.47042 * 59.99502 * 18 17 16 22 22 C 1.52996 * 109.47495 * 300.00491 * 21 18 17 23 23 H 1.08999 * 109.47196 * 83.77534 * 1 2 3 24 24 H 1.08999 * 109.46999 * 203.77561 * 1 2 3 25 25 H 1.08998 * 109.46910 * 323.77435 * 1 2 3 26 26 H 1.08000 * 119.55021 * 180.02562 * 7 6 5 27 27 H 1.09003 * 109.47104 * 240.00512 * 9 8 7 28 28 H 0.96696 * 113.99616 * 300.00389 * 10 9 8 29 29 H 1.48503 * 110.00091 * 179.97438 * 11 9 8 30 30 H 1.48499 * 110.00399 * 301.32127 * 11 9 8 31 31 H 1.08009 * 120.75690 * 180.26072 * 12 8 7 32 32 H 1.07994 * 120.47258 * 179.71385 * 13 12 8 33 33 H 1.09008 * 109.46918 * 300.00107 * 16 14 2 34 34 H 1.09001 * 109.47443 * 59.99435 * 16 14 2 35 35 H 1.09000 * 109.47332 * 179.97438 * 17 16 14 36 36 H 1.08993 * 109.46752 * 59.99411 * 17 16 14 37 37 H 0.96704 * 113.99281 * 300.00190 * 20 18 17 38 38 H 1.09002 * 109.46791 * 179.97438 * 21 18 17 39 39 H 1.09000 * 109.46471 * 60.00410 * 21 18 17 40 40 H 1.09002 * 109.46695 * 299.99325 * 22 21 18 41 41 H 1.08998 * 109.46739 * 180.02562 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1390 1.1671 0.0000 4 8 3.3535 1.1675 -0.0386 5 6 1.3988 2.4500 0.0472 6 7 0.0757 2.4504 -0.0556 7 6 -0.6188 3.5667 -0.0190 8 6 0.0113 4.7924 0.1238 9 6 -0.7969 6.0640 0.1575 10 8 -0.5769 6.7355 1.3996 11 14 -2.6062 5.6546 -0.0146 12 6 1.3919 4.8372 0.2404 13 6 2.0979 3.6454 0.1986 14 6 2.1975 -1.2687 -0.0006 15 1 3.2691 -1.0697 0.0000 16 6 1.8279 -2.0717 1.2483 17 6 2.5933 -3.3964 1.2480 18 6 2.2242 -4.1984 -0.0015 19 1 2.7692 -5.1424 -0.0015 20 8 0.8193 -4.4600 -0.0020 21 6 2.5938 -3.3955 -1.2505 22 6 1.8284 -2.0707 -1.2502 23 1 -0.3633 0.1114 -1.0216 24 1 -0.3633 -0.9404 0.4143 25 1 -0.3633 0.8290 0.6073 26 1 -1.6946 3.5277 -0.1053 27 1 -0.4906 6.7110 -0.6646 28 1 -0.8276 6.2173 2.1765 29 1 -3.4141 6.9002 0.0177 30 1 -2.8437 4.9275 -1.2874 31 1 1.9060 5.7799 0.3569 32 1 3.1746 3.6435 0.2818 33 1 2.0912 -1.5004 2.1386 34 1 0.7562 -2.2708 1.2482 35 1 2.3303 -3.9682 2.1380 36 1 3.6648 -3.1969 1.2483 37 1 0.5133 -4.9665 0.7628 38 1 2.3312 -3.9671 -2.1407 39 1 3.6654 -3.1960 -1.2501 40 1 0.7568 -2.2703 -1.2505 41 1 2.0915 -1.4990 -2.1401 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:59 Heat of formation + Delta-G solvation = -60.211444 kcal Electronic energy + Delta-G solvation = -24075.569547 eV Core-core repulsion = 20536.658050 eV Total energy + Delta-G solvation = -3538.911498 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.03931 -40.81752 -39.51462 -37.98224 -37.03888 -35.04238 -33.67695 -32.96881 -31.85138 -30.16689 -28.02444 -27.41275 -25.01472 -24.30066 -23.76274 -22.90224 -21.17623 -20.43205 -18.78245 -18.51451 -17.87923 -17.71989 -17.07481 -16.92182 -16.60588 -16.42490 -16.14690 -15.93487 -15.61346 -14.86270 -14.76094 -14.61906 -14.38030 -14.33221 -14.06420 -13.86389 -13.68839 -13.25950 -13.17495 -13.05962 -12.83669 -12.62114 -12.38568 -12.13875 -12.07810 -11.43381 -11.29295 -11.16888 -11.06754 -10.77029 -10.69717 -10.28620 -10.22001 -9.51688 -5.19539 -0.55798 0.04307 1.08832 1.47542 1.67026 1.83945 1.90558 2.67445 2.92046 3.23659 3.27517 3.41688 3.52118 3.68354 3.70691 3.75190 3.92257 3.94966 4.05346 4.10602 4.20316 4.28631 4.35359 4.36880 4.48865 4.51133 4.53742 4.68154 4.76870 4.86147 4.89011 4.92795 4.95526 5.02400 5.11806 5.14205 5.18297 5.28897 5.39537 5.46190 5.66560 6.33793 6.36732 6.53361 6.68971 7.14583 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.072 3.928 2 N -0.589 5.589 3 C 0.568 3.432 4 O -0.534 6.534 5 C 0.083 3.917 6 N -0.443 5.443 7 C 0.095 3.905 8 C -0.150 4.150 9 C -0.067 4.067 10 O -0.536 6.536 11 Si 0.688 3.312 12 C -0.053 4.053 13 C -0.108 4.108 14 C 0.138 3.862 15 H 0.100 0.900 16 C -0.122 4.122 17 C -0.150 4.150 18 C 0.103 3.897 19 H 0.057 0.943 20 O -0.563 6.563 21 C -0.110 4.110 22 C -0.122 4.122 23 H 0.057 0.943 24 H 0.064 0.936 25 H 0.107 0.893 26 H 0.164 0.836 27 H 0.120 0.880 28 H 0.381 0.619 29 H -0.249 1.249 30 H -0.252 1.252 31 H 0.147 0.853 32 H 0.152 0.848 33 H 0.064 0.936 34 H 0.075 0.925 35 H 0.070 0.930 36 H 0.075 0.925 37 H 0.377 0.623 38 H 0.074 0.926 39 H 0.078 0.922 40 H 0.077 0.923 41 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.101 -1.645 3.022 4.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.319 5.319 3 C 0.355 3.645 4 O -0.411 6.411 5 C -0.055 4.055 6 N -0.155 5.155 7 C -0.063 4.063 8 C -0.153 4.153 9 C -0.178 4.178 10 O -0.342 6.342 11 Si 0.589 3.411 12 C -0.078 4.078 13 C -0.128 4.128 14 C 0.035 3.965 15 H 0.118 0.882 16 C -0.161 4.161 17 C -0.188 4.188 18 C 0.044 3.956 19 H 0.075 0.925 20 O -0.369 6.369 21 C -0.148 4.148 22 C -0.160 4.160 23 H 0.075 0.925 24 H 0.082 0.918 25 H 0.125 0.875 26 H 0.181 0.819 27 H 0.138 0.862 28 H 0.228 0.772 29 H -0.174 1.174 30 H -0.177 1.177 31 H 0.165 0.835 32 H 0.169 0.831 33 H 0.083 0.917 34 H 0.094 0.906 35 H 0.089 0.911 36 H 0.093 0.907 37 H 0.224 0.776 38 H 0.093 0.907 39 H 0.096 0.904 40 H 0.096 0.904 41 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -3.351 -1.564 1.458 3.975 hybrid contribution 0.929 0.631 0.309 1.165 sum -2.422 -0.932 1.767 3.140 Atomic orbital electron populations 1.22407 0.77915 1.03500 1.03167 1.47772 1.08153 1.04999 1.71012 1.17925 0.86508 0.83031 0.77050 1.90795 1.12892 1.86738 1.50647 1.21187 0.90028 0.94094 1.00148 1.68098 1.06967 1.29356 1.11086 1.22785 1.00130 0.87225 0.96163 1.21645 0.95839 0.96931 1.00869 1.25057 1.09798 0.92779 0.90207 1.86536 1.88759 1.44251 1.14618 0.94788 0.75068 0.83815 0.87420 1.21549 0.93153 0.98922 0.94218 1.22200 1.02529 0.91467 0.96627 1.21205 0.97926 0.82115 0.95232 0.88230 1.21778 1.01531 0.95432 0.97327 1.22222 1.01350 0.96691 0.98554 1.21806 0.82163 0.96792 0.94850 0.92471 1.86525 1.23140 1.77718 1.49497 1.21521 1.00299 0.95605 0.97391 1.21764 1.01898 0.95244 0.97119 0.92478 0.91781 0.87495 0.81943 0.86238 0.77151 1.17386 1.17706 0.83496 0.83068 0.91695 0.90626 0.91140 0.90651 0.77637 0.90732 0.90365 0.90441 0.91751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.01 8.33 59.85 0.50 0.51 16 2 N -0.59 -1.19 2.76 -174.92 -0.48 -1.68 16 3 C 0.57 2.22 7.66 -12.18 -0.09 2.12 16 4 O -0.53 -3.54 15.68 5.35 0.08 -3.46 16 5 C 0.08 0.19 6.62 -83.01 -0.55 -0.36 16 6 N -0.44 -0.37 6.04 -9.80 -0.06 -0.43 16 7 C 0.10 -0.10 9.84 -17.57 -0.17 -0.27 16 8 C -0.15 0.18 5.41 -104.36 -0.56 -0.39 16 9 C -0.07 0.13 2.84 36.01 0.10 0.23 16 10 O -0.54 0.78 12.77 -35.23 -0.45 0.33 16 11 Si 0.69 -1.88 29.81 -169.99 -5.07 -6.94 16 12 C -0.05 0.02 9.76 -39.31 -0.38 -0.36 16 13 C -0.11 -0.12 9.63 -39.05 -0.38 -0.50 16 14 C 0.14 0.19 2.51 -67.93 -0.17 0.02 16 15 H 0.10 0.30 6.90 -51.93 -0.36 -0.05 16 16 C -0.12 0.01 5.05 -26.73 -0.13 -0.12 16 17 C -0.15 0.19 5.64 -26.73 -0.15 0.04 16 18 C 0.10 -0.09 3.77 -26.73 -0.10 -0.19 16 19 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 20 O -0.56 0.14 11.97 -35.23 -0.42 -0.29 16 21 C -0.11 0.01 5.66 -26.73 -0.15 -0.15 16 22 C -0.12 -0.12 5.06 -26.73 -0.14 -0.25 16 23 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 24 H 0.06 -0.05 6.44 -51.93 -0.33 -0.38 16 25 H 0.11 -0.01 5.26 -52.08 -0.27 -0.28 16 26 H 0.16 -0.56 4.89 -52.49 -0.26 -0.81 16 27 H 0.12 -0.19 7.96 -51.93 -0.41 -0.61 16 28 H 0.38 -2.00 8.70 45.56 0.40 -1.60 16 29 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 30 H -0.25 0.12 7.11 56.52 0.40 0.52 16 31 H 0.15 -0.25 8.06 -52.48 -0.42 -0.67 16 32 H 0.15 0.14 7.66 -52.49 -0.40 -0.26 16 33 H 0.06 0.04 8.14 -51.92 -0.42 -0.39 16 34 H 0.08 -0.01 6.21 -51.93 -0.32 -0.33 16 35 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.38 -1.41 9.08 45.56 0.41 -0.99 16 38 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 39 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 40 H 0.08 0.12 7.21 -51.93 -0.37 -0.25 16 41 H 0.06 0.12 8.14 -51.93 -0.42 -0.31 16 LS Contribution 324.55 15.07 4.89 4.89 Total: 0.00 -7.50 324.55 -8.82 -16.32 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -4.93 Total: -9.09 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: -2.38 Total: 0.35 kcal Atomic # 7 Polarization: -1.56 SS G_CDS: -0.54 Total: -2.11 kcal Atomic # 8 Polarization: -2.63 SS G_CDS: -0.79 Total: -3.41 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: -5.07 Total: -6.94 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -7.50 -8.82 -16.32 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.893 kcal (2) G-P(sol) polarization free energy of solvation -7.499 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.318 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.211 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds