Wall clock time and date at job start Sun Mar 7 2021 05:39:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34770 * 120.00270 * 2 1 4 4 O 1.21515 * 120.00384 * 182.10099 * 3 2 1 5 5 C 1.48179 * 119.99876 * 2.10785 * 3 2 1 6 6 N 1.32713 * 119.72067 * 352.77825 * 5 3 2 7 7 C 1.31522 * 121.64023 * 180.02562 * 6 5 3 8 8 C 1.38555 * 120.90215 * 0.27317 * 7 6 5 9 9 C 1.50705 * 120.32424 * 179.70121 * 8 7 6 10 10 O 1.42903 * 109.47206 * 120.00255 * 9 8 7 11 11 Si 1.86300 * 109.46922 * 0.02562 * 9 8 7 12 12 C 1.38625 * 119.35292 * 359.45984 * 8 7 6 13 13 C 1.38588 * 118.48933 * 0.52589 * 12 8 7 14 14 C 1.46500 * 119.99880 * 180.02562 * 2 1 3 15 15 H 1.08991 * 109.47396 * 180.02562 * 14 2 1 16 16 C 1.53001 * 109.47290 * 300.00287 * 14 2 1 17 17 C 1.53003 * 109.47473 * 180.02562 * 16 14 2 18 18 C 1.52999 * 109.46924 * 299.99666 * 17 16 14 19 19 H 1.08999 * 109.47362 * 180.02562 * 18 17 16 20 20 O 1.42908 * 109.47363 * 300.00258 * 18 17 16 21 21 C 1.53008 * 109.47042 * 59.99502 * 18 17 16 22 22 C 1.52996 * 109.47495 * 300.00491 * 21 18 17 23 23 H 1.08999 * 109.47196 * 83.77534 * 1 2 3 24 24 H 1.08999 * 109.46999 * 203.77561 * 1 2 3 25 25 H 1.08998 * 109.46910 * 323.77435 * 1 2 3 26 26 H 1.08000 * 119.55021 * 180.02562 * 7 6 5 27 27 H 1.09003 * 109.47104 * 240.00512 * 9 8 7 28 28 H 0.96696 * 113.99616 * 300.00389 * 10 9 8 29 29 H 1.48503 * 110.00091 * 179.97438 * 11 9 8 30 30 H 1.48499 * 110.00399 * 301.32127 * 11 9 8 31 31 H 1.08009 * 120.75690 * 180.26072 * 12 8 7 32 32 H 1.07994 * 120.47258 * 179.71385 * 13 12 8 33 33 H 1.09008 * 109.46918 * 300.00107 * 16 14 2 34 34 H 1.09001 * 109.47443 * 59.99435 * 16 14 2 35 35 H 1.09000 * 109.47332 * 179.97438 * 17 16 14 36 36 H 1.08993 * 109.46752 * 59.99411 * 17 16 14 37 37 H 0.96704 * 113.99281 * 300.00190 * 20 18 17 38 38 H 1.09002 * 109.46791 * 179.97438 * 21 18 17 39 39 H 1.09000 * 109.46471 * 60.00410 * 21 18 17 40 40 H 1.09002 * 109.46695 * 299.99325 * 22 21 18 41 41 H 1.08998 * 109.46739 * 180.02562 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1390 1.1671 0.0000 4 8 3.3535 1.1675 -0.0386 5 6 1.3988 2.4500 0.0472 6 7 0.0757 2.4504 -0.0556 7 6 -0.6188 3.5667 -0.0190 8 6 0.0113 4.7924 0.1238 9 6 -0.7969 6.0640 0.1575 10 8 -0.5769 6.7355 1.3996 11 14 -2.6062 5.6546 -0.0146 12 6 1.3919 4.8372 0.2404 13 6 2.0979 3.6454 0.1986 14 6 2.1975 -1.2687 -0.0006 15 1 3.2691 -1.0697 0.0000 16 6 1.8279 -2.0717 1.2483 17 6 2.5933 -3.3964 1.2480 18 6 2.2242 -4.1984 -0.0015 19 1 2.7692 -5.1424 -0.0015 20 8 0.8193 -4.4600 -0.0020 21 6 2.5938 -3.3955 -1.2505 22 6 1.8284 -2.0707 -1.2502 23 1 -0.3633 0.1114 -1.0216 24 1 -0.3633 -0.9404 0.4143 25 1 -0.3633 0.8290 0.6073 26 1 -1.6946 3.5277 -0.1053 27 1 -0.4906 6.7110 -0.6646 28 1 -0.8276 6.2173 2.1765 29 1 -3.4141 6.9002 0.0177 30 1 -2.8437 4.9275 -1.2874 31 1 1.9060 5.7799 0.3569 32 1 3.1746 3.6435 0.2818 33 1 2.0912 -1.5004 2.1386 34 1 0.7562 -2.2708 1.2482 35 1 2.3303 -3.9682 2.1380 36 1 3.6648 -3.1969 1.2483 37 1 0.5133 -4.9665 0.7628 38 1 2.3312 -3.9671 -2.1407 39 1 3.6654 -3.1960 -1.2501 40 1 0.7568 -2.2703 -1.2505 41 1 2.0915 -1.4990 -2.1401 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:39:58 Heat of formation + Delta-G solvation = -60.467676 kcal Electronic energy + Delta-G solvation = -24075.580658 eV Core-core repulsion = 20536.658050 eV Total energy + Delta-G solvation = -3538.922609 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.12244 -40.87210 -39.59665 -37.88470 -37.15608 -35.07790 -33.67114 -32.98446 -31.85871 -30.18935 -28.09619 -27.42121 -25.00025 -24.32000 -23.77180 -22.90267 -21.22805 -20.50009 -18.78474 -18.57359 -17.93217 -17.65976 -17.09399 -16.93368 -16.70052 -16.44093 -16.07655 -15.92953 -15.59162 -14.96797 -14.77860 -14.60966 -14.37484 -14.34837 -14.10823 -13.99873 -13.66788 -13.27198 -13.18756 -13.03552 -12.86598 -12.51536 -12.41325 -12.13613 -12.06404 -11.52633 -11.45633 -11.22082 -11.06323 -10.70628 -10.60829 -10.31865 -10.23238 -9.67038 -5.00056 -0.61383 0.05729 1.25295 1.49853 1.64595 1.77710 1.98538 2.60665 2.87290 3.39508 3.42353 3.47816 3.52438 3.67956 3.73585 3.77946 3.92781 3.96184 4.05651 4.08670 4.19082 4.30715 4.36998 4.40636 4.45496 4.49639 4.56424 4.66931 4.76707 4.83131 4.90762 4.97025 4.97875 5.02207 5.10895 5.12115 5.15940 5.25929 5.35925 5.42717 5.57770 6.18623 6.48628 6.72152 6.93095 6.94817 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.587 5.587 3 C 0.559 3.441 4 O -0.574 6.574 5 C 0.065 3.935 6 N -0.448 5.448 7 C 0.096 3.904 8 C -0.141 4.141 9 C -0.070 4.070 10 O -0.551 6.551 11 Si 0.777 3.223 12 C -0.052 4.052 13 C -0.115 4.115 14 C 0.136 3.864 15 H 0.079 0.921 16 C -0.115 4.115 17 C -0.146 4.146 18 C 0.106 3.894 19 H 0.069 0.931 20 O -0.579 6.579 21 C -0.113 4.113 22 C -0.114 4.114 23 H 0.055 0.945 24 H 0.075 0.925 25 H 0.112 0.888 26 H 0.189 0.811 27 H 0.118 0.882 28 H 0.398 0.602 29 H -0.297 1.297 30 H -0.278 1.278 31 H 0.160 0.840 32 H 0.145 0.855 33 H 0.057 0.943 34 H 0.080 0.920 35 H 0.086 0.914 36 H 0.073 0.927 37 H 0.392 0.608 38 H 0.072 0.928 39 H 0.081 0.919 40 H 0.074 0.926 41 H 0.050 0.950 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.275 -1.922 3.677 5.957 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 N -0.316 5.316 3 C 0.347 3.653 4 O -0.454 6.454 5 C -0.072 4.072 6 N -0.159 5.159 7 C -0.063 4.063 8 C -0.143 4.143 9 C -0.180 4.180 10 O -0.359 6.359 11 Si 0.682 3.318 12 C -0.078 4.078 13 C -0.136 4.136 14 C 0.034 3.966 15 H 0.097 0.903 16 C -0.153 4.153 17 C -0.184 4.184 18 C 0.047 3.953 19 H 0.087 0.913 20 O -0.387 6.387 21 C -0.151 4.151 22 C -0.152 4.152 23 H 0.074 0.926 24 H 0.094 0.906 25 H 0.130 0.870 26 H 0.205 0.795 27 H 0.135 0.865 28 H 0.248 0.752 29 H -0.224 1.224 30 H -0.204 1.204 31 H 0.177 0.823 32 H 0.163 0.837 33 H 0.076 0.924 34 H 0.099 0.901 35 H 0.105 0.895 36 H 0.092 0.908 37 H 0.241 0.759 38 H 0.090 0.910 39 H 0.100 0.900 40 H 0.092 0.908 41 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges -4.529 -1.881 2.144 5.353 hybrid contribution 1.227 0.793 0.093 1.463 sum -3.303 -1.088 2.237 4.135 Atomic orbital electron populations 1.22478 0.76648 1.04347 1.03239 1.47920 1.08971 1.04797 1.69875 1.18288 0.86292 0.84069 0.76648 1.90757 1.14473 1.87385 1.52770 1.21024 0.90694 0.93544 1.01949 1.68070 1.06288 1.30252 1.11323 1.23199 1.01161 0.86743 0.95170 1.21770 0.95574 0.97310 0.99656 1.25185 1.10348 0.92199 0.90290 1.86508 1.88960 1.45048 1.15366 0.93767 0.72139 0.80696 0.85238 1.21702 0.93588 0.98739 0.93735 1.22223 1.02444 0.91849 0.97087 1.21234 0.96822 0.82196 0.96384 0.90317 1.21713 1.01935 0.95715 0.95955 1.22209 1.01038 0.96020 0.99142 1.21770 0.82219 0.97072 0.94239 0.91344 1.86488 1.23301 1.78181 1.50696 1.21559 1.00416 0.95077 0.98072 1.21667 1.01727 0.95585 0.96231 0.92644 0.90611 0.87002 0.79474 0.86470 0.75205 1.22431 1.20449 0.82267 0.83682 0.92390 0.90150 0.89504 0.90832 0.75886 0.90950 0.90015 0.90764 0.93155 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.05 8.33 127.77 1.06 1.11 16 2 N -0.59 -3.20 2.76 -825.64 -2.28 -5.48 16 3 C 0.56 5.51 7.66 86.89 0.67 6.18 16 4 O -0.57 -9.28 15.68 -3.76 -0.06 -9.33 16 5 C 0.06 0.37 6.62 41.91 0.28 0.64 16 6 N -0.45 -0.78 6.04 -184.91 -1.12 -1.90 16 7 C 0.10 -0.28 9.84 84.81 0.83 0.56 16 8 C -0.14 0.44 5.41 -19.69 -0.11 0.33 16 9 C -0.07 0.35 2.84 71.24 0.20 0.55 16 10 O -0.55 2.25 12.77 -148.98 -1.90 0.35 16 11 Si 0.78 -4.98 29.81 68.60 2.05 -2.94 16 12 C -0.05 0.05 9.76 22.45 0.22 0.27 16 13 C -0.12 -0.40 9.63 22.61 0.22 -0.18 16 14 C 0.14 0.58 2.51 44.99 0.11 0.69 16 15 H 0.08 0.68 6.90 -2.39 -0.02 0.66 16 16 C -0.11 -0.01 5.05 30.60 0.15 0.14 16 17 C -0.15 0.43 5.64 30.59 0.17 0.60 16 18 C 0.11 -0.23 3.77 30.60 0.12 -0.11 16 19 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 20 O -0.58 0.73 11.97 -148.98 -1.78 -1.05 16 21 C -0.11 -0.05 5.66 30.60 0.17 0.12 16 22 C -0.11 -0.35 5.06 30.59 0.15 -0.20 16 23 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 24 H 0.08 -0.14 6.44 -2.39 -0.02 -0.15 16 25 H 0.11 -0.02 5.26 -2.69 -0.01 -0.04 16 26 H 0.19 -1.62 4.89 -2.91 -0.01 -1.63 16 27 H 0.12 -0.49 7.96 -2.39 -0.02 -0.51 16 28 H 0.40 -4.78 8.70 -74.06 -0.64 -5.42 16 29 H -0.30 -0.51 7.11 99.48 0.71 0.20 16 30 H -0.28 0.55 7.11 99.48 0.71 1.26 16 31 H 0.16 -0.59 8.06 -2.91 -0.02 -0.62 16 32 H 0.15 0.59 7.66 -2.91 -0.02 0.57 16 33 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 34 H 0.08 -0.06 6.21 -2.39 -0.01 -0.07 16 35 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 36 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 37 H 0.39 -3.39 9.08 -74.05 -0.67 -4.07 16 38 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 39 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 40 H 0.07 0.28 7.21 -2.39 -0.02 0.26 16 41 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 Total: 0.00 -18.78 324.55 -1.06 -19.84 By element: Atomic # 1 Polarization: -9.97 SS G_CDS: -0.22 Total: -10.19 kcal Atomic # 6 Polarization: 6.45 SS G_CDS: 4.26 Total: 10.71 kcal Atomic # 7 Polarization: -3.98 SS G_CDS: -3.40 Total: -7.38 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -3.75 Total: -10.04 kcal Atomic # 14 Polarization: -4.98 SS G_CDS: 2.05 Total: -2.94 kcal Total: -18.78 -1.06 -19.84 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.630 kcal (2) G-P(sol) polarization free energy of solvation -18.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.413 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.838 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.468 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds