Wall clock time and date at job start Sun Mar 7 2021 05:40:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34773 * 119.99777 * 2 1 4 4 O 1.21558 * 119.99586 * 184.84069 * 3 2 1 5 5 C 1.47836 * 120.00215 * 4.84296 * 3 2 1 6 6 C 1.39519 * 120.55842 * 321.37694 * 5 3 2 7 7 N 1.31696 * 120.56858 * 180.02562 * 6 5 3 8 8 C 1.31926 * 121.87839 * 359.74495 * 7 6 5 9 9 C 1.38358 * 121.07889 * 0.55391 * 8 7 6 10 10 C 1.50699 * 120.34714 * 179.71766 * 9 8 7 11 11 O 1.42903 * 109.46776 * 119.71969 * 10 9 8 12 12 Si 1.86299 * 109.47225 * 359.72205 * 10 9 8 13 13 C 1.38351 * 119.30133 * 359.43715 * 9 8 7 14 14 C 1.46502 * 120.00001 * 179.97438 * 2 1 3 15 15 H 1.09003 * 109.47194 * 179.97438 * 14 2 1 16 16 C 1.52995 * 109.47377 * 299.99947 * 14 2 1 17 17 C 1.53001 * 109.47207 * 179.97438 * 16 14 2 18 18 C 1.53001 * 109.47111 * 300.00307 * 17 16 14 19 19 H 1.09002 * 109.46995 * 180.02562 * 18 17 16 20 20 O 1.42909 * 109.46907 * 299.99917 * 18 17 16 21 21 C 1.52995 * 109.47336 * 59.99772 * 18 17 16 22 22 C 1.53001 * 109.47207 * 300.00169 * 21 18 17 23 23 H 1.08996 * 109.47122 * 85.12635 * 1 2 3 24 24 H 1.09002 * 109.46928 * 205.12118 * 1 2 3 25 25 H 1.08992 * 109.47103 * 325.12085 * 1 2 3 26 26 H 1.07999 * 119.71520 * 0.02651 * 6 5 3 27 27 H 1.07995 * 119.46108 * 180.26770 * 8 7 6 28 28 H 1.09000 * 109.47157 * 239.71607 * 10 9 8 29 29 H 0.96700 * 114.00073 * 299.99524 * 11 10 9 30 30 H 1.48495 * 110.00431 * 58.68068 * 12 10 9 31 31 H 1.48502 * 109.99706 * 180.02562 * 12 10 9 32 32 H 1.07999 * 120.85756 * 180.30218 * 13 9 8 33 33 H 1.08998 * 109.46989 * 300.00155 * 16 14 2 34 34 H 1.09003 * 109.46777 * 59.99804 * 16 14 2 35 35 H 1.08999 * 109.46789 * 180.02562 * 17 16 14 36 36 H 1.08994 * 109.47022 * 60.00312 * 17 16 14 37 37 H 0.96706 * 114.00010 * 299.99865 * 20 18 17 38 38 H 1.08998 * 109.46989 * 179.97438 * 21 18 17 39 39 H 1.08994 * 109.46875 * 59.99947 * 21 18 17 40 40 H 1.09003 * 109.47332 * 299.99758 * 22 21 18 41 41 H 1.08998 * 109.47264 * 179.97438 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3512 1.1690 -0.0888 5 6 1.4036 2.4452 0.1081 6 6 0.1846 2.6199 -0.5477 7 7 -0.4703 3.7585 -0.4519 8 6 -0.0114 4.7683 0.2624 9 6 1.1929 4.6766 0.9374 10 6 1.7046 5.8426 1.7435 11 8 1.8473 5.4506 3.1103 12 14 0.4972 7.2565 1.6257 13 6 1.9194 3.5012 0.8695 14 6 2.1975 -1.2687 0.0006 15 1 3.2692 -1.0696 0.0000 16 6 1.8280 -2.0705 1.2501 17 6 2.5925 -3.3958 1.2503 18 6 2.2224 -4.1983 0.0014 19 1 2.7667 -5.1427 0.0018 20 8 0.8172 -4.4590 0.0018 21 6 2.5919 -3.3966 -1.2481 22 6 1.8274 -2.0713 -1.2484 23 1 -0.3633 0.0873 -1.0239 24 1 -0.3633 -0.9305 0.4363 25 1 -0.3633 0.8430 0.5876 26 1 -0.2255 1.8145 -1.1389 27 1 -0.5828 5.6830 0.3174 28 1 2.6722 6.1575 1.3529 29 1 1.0235 5.1577 3.5235 30 1 -0.8345 6.8303 2.1257 31 1 0.9908 8.4129 2.4160 32 1 2.8601 3.4005 1.3905 33 1 2.0913 -1.4985 2.1398 34 1 0.7563 -2.2696 1.2502 35 1 2.3288 -3.9671 2.1404 36 1 3.6642 -3.1970 1.2501 37 1 0.5112 -4.9648 0.7671 38 1 2.3286 -3.9685 -2.1378 39 1 3.6636 -3.1978 -1.2484 40 1 0.7556 -2.2700 -1.2481 41 1 2.0910 -1.4999 -2.1383 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:40:15 Heat of formation + Delta-G solvation = -67.478016 kcal Electronic energy + Delta-G solvation = -24156.483360 eV Core-core repulsion = 20617.256760 eV Total energy + Delta-G solvation = -3539.226600 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.11115 -40.90329 -39.59144 -38.10925 -37.13865 -35.18180 -33.78157 -33.07674 -31.92825 -30.12505 -28.27819 -27.20748 -25.84556 -23.88788 -23.83204 -23.04201 -20.96033 -20.47493 -18.98068 -18.38094 -17.92837 -17.91455 -17.60351 -17.32929 -16.72030 -16.43741 -16.25744 -15.79614 -15.56694 -15.02494 -14.79516 -14.61173 -14.46587 -14.32396 -14.15640 -14.01549 -13.58913 -13.36765 -13.30299 -13.15916 -12.97418 -12.83043 -12.47978 -12.16664 -12.08728 -11.49743 -11.38562 -11.26336 -11.09467 -10.84093 -10.71122 -10.49005 -10.26418 -9.74978 -5.07949 -0.48567 -0.01593 1.11328 1.46968 1.59184 1.78586 1.86477 2.53547 3.04578 3.20464 3.21037 3.29760 3.49442 3.59799 3.64534 3.66296 3.73277 3.86126 3.95668 3.99801 4.09232 4.13781 4.19917 4.26547 4.37848 4.38970 4.42406 4.47059 4.53879 4.60841 4.78923 4.83467 4.84865 4.88544 4.95610 5.05194 5.07352 5.20129 5.30314 5.32096 5.45885 6.20125 6.23685 6.62653 6.65076 7.01061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.604 5.604 3 C 0.565 3.435 4 O -0.527 6.527 5 C -0.183 4.183 6 C 0.130 3.870 7 N -0.477 5.477 8 C 0.124 3.876 9 C -0.177 4.177 10 C -0.071 4.071 11 O -0.526 6.526 12 Si 0.686 3.314 13 C 0.005 3.995 14 C 0.141 3.859 15 H 0.102 0.898 16 C -0.124 4.124 17 C -0.150 4.150 18 C 0.102 3.898 19 H 0.058 0.942 20 O -0.564 6.564 21 C -0.110 4.110 22 C -0.123 4.123 23 H 0.065 0.935 24 H 0.083 0.917 25 H 0.074 0.926 26 H 0.171 0.829 27 H 0.163 0.837 28 H 0.125 0.875 29 H 0.377 0.623 30 H -0.255 1.255 31 H -0.251 1.251 32 H 0.147 0.853 33 H 0.064 0.936 34 H 0.074 0.926 35 H 0.070 0.930 36 H 0.075 0.925 37 H 0.377 0.623 38 H 0.075 0.925 39 H 0.078 0.922 40 H 0.077 0.923 41 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.839 -1.785 0.183 3.359 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.336 5.336 3 C 0.353 3.647 4 O -0.404 6.404 5 C -0.188 4.188 6 C -0.027 4.027 7 N -0.184 5.184 8 C -0.032 4.032 9 C -0.179 4.179 10 C -0.182 4.182 11 O -0.332 6.332 12 Si 0.586 3.414 13 C -0.021 4.021 14 C 0.038 3.962 15 H 0.120 0.880 16 C -0.162 4.162 17 C -0.188 4.188 18 C 0.044 3.956 19 H 0.076 0.924 20 O -0.369 6.369 21 C -0.148 4.148 22 C -0.161 4.161 23 H 0.083 0.917 24 H 0.101 0.899 25 H 0.092 0.908 26 H 0.188 0.812 27 H 0.179 0.821 28 H 0.142 0.858 29 H 0.224 0.776 30 H -0.179 1.179 31 H -0.175 1.175 32 H 0.165 0.835 33 H 0.083 0.917 34 H 0.093 0.907 35 H 0.089 0.911 36 H 0.094 0.906 37 H 0.224 0.776 38 H 0.094 0.906 39 H 0.097 0.903 40 H 0.095 0.905 41 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -2.872 -0.654 -0.545 2.995 hybrid contribution 0.572 -1.224 1.900 2.331 sum -2.300 -1.878 1.356 3.264 Atomic orbital electron populations 1.22190 0.79439 1.04070 1.02020 1.47780 1.07146 1.05586 1.73058 1.18115 0.86940 0.83239 0.76423 1.90817 1.13442 1.86960 1.49153 1.20971 0.97980 0.96093 1.03778 1.23525 0.89461 0.95188 0.94571 1.67797 1.33744 1.00044 1.16828 1.22888 0.92294 0.97121 0.90882 1.21322 0.97006 0.97505 1.02054 1.24997 1.10254 1.00573 0.82326 1.86641 1.36933 1.86420 1.23249 0.94992 0.76811 0.77913 0.91667 1.21524 0.98330 0.89899 0.92332 1.21197 0.97985 0.81754 0.95243 0.88030 1.21787 1.01474 0.95565 0.97356 1.22222 1.01384 0.96596 0.98637 1.21809 0.82156 0.96856 0.94811 0.92404 1.86517 1.23127 1.77775 1.49517 1.21517 1.00354 0.95543 0.97417 1.21786 1.01852 0.95357 0.97152 0.91660 0.89880 0.90760 0.81204 0.82075 0.85763 0.77563 1.17943 1.17526 0.83513 0.91687 0.90714 0.91111 0.90591 0.77594 0.90635 0.90305 0.90465 0.91538 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.15 7.90 59.85 0.47 0.33 16 2 N -0.60 -0.23 2.76 -175.05 -0.48 -0.72 16 3 C 0.57 1.59 7.38 -12.33 -0.09 1.50 16 4 O -0.53 -3.37 16.27 5.31 0.09 -3.29 16 5 C -0.18 -0.26 5.26 -104.82 -0.55 -0.81 16 6 C 0.13 0.04 8.76 -17.13 -0.15 -0.11 16 7 N -0.48 -0.52 10.35 -12.91 -0.13 -0.66 16 8 C 0.12 -0.03 9.84 -17.47 -0.17 -0.20 16 9 C -0.18 0.03 5.39 -104.54 -0.56 -0.53 16 10 C -0.07 0.07 2.83 36.01 0.10 0.17 16 11 O -0.53 -0.22 12.78 -35.23 -0.45 -0.67 16 12 Si 0.69 -1.37 29.82 -169.99 -5.07 -6.44 16 13 C 0.01 0.01 9.38 -38.87 -0.36 -0.36 16 14 C 0.14 0.04 2.51 -67.93 -0.17 -0.13 16 15 H 0.10 0.23 6.91 -51.93 -0.36 -0.13 16 16 C -0.12 0.12 5.05 -26.73 -0.13 -0.02 16 17 C -0.15 0.28 5.64 -26.73 -0.15 0.13 16 18 C 0.10 -0.15 3.77 -26.73 -0.10 -0.25 16 19 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 20 O -0.56 0.52 11.97 -35.23 -0.42 0.10 16 21 C -0.11 0.09 5.66 -26.73 -0.15 -0.06 16 22 C -0.12 0.03 5.06 -26.73 -0.14 -0.10 16 23 H 0.07 -0.22 6.88 -51.93 -0.36 -0.58 16 24 H 0.08 -0.24 6.44 -51.93 -0.33 -0.57 16 25 H 0.07 -0.18 5.83 -51.93 -0.30 -0.48 16 26 H 0.17 -0.31 5.25 -52.49 -0.28 -0.59 16 27 H 0.16 -0.39 4.88 -52.49 -0.26 -0.65 16 28 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 29 H 0.38 -0.96 8.70 45.56 0.40 -0.56 16 30 H -0.25 0.09 7.11 56.52 0.40 0.49 16 31 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 32 H 0.15 0.25 8.06 -52.49 -0.42 -0.17 16 33 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.07 -0.09 6.20 -51.93 -0.32 -0.41 16 35 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.38 -1.61 9.08 45.56 0.41 -1.20 16 38 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 40 H 0.08 0.00 7.21 -51.93 -0.37 -0.37 16 41 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 LS Contribution 322.98 15.07 4.87 4.87 Total: 0.00 -8.02 322.98 -8.53 -16.55 By element: Atomic # 1 Polarization: -4.53 SS G_CDS: -4.76 Total: -9.30 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -2.16 Total: -0.45 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: -0.62 Total: -1.38 kcal Atomic # 8 Polarization: -3.07 SS G_CDS: -0.79 Total: -3.85 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.07 Total: -6.44 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -8.02 -8.53 -16.55 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.928 kcal (2) G-P(sol) polarization free energy of solvation -8.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.948 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.530 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.550 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.478 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds