Wall clock time and date at job start Sun Mar 7 2021 05:40:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34773 * 119.99777 * 2 1 4 4 O 1.21558 * 119.99586 * 184.84069 * 3 2 1 5 5 C 1.47836 * 120.00215 * 4.84296 * 3 2 1 6 6 C 1.39519 * 120.55842 * 321.37694 * 5 3 2 7 7 N 1.31696 * 120.56858 * 180.02562 * 6 5 3 8 8 C 1.31926 * 121.87839 * 359.74495 * 7 6 5 9 9 C 1.38358 * 121.07889 * 0.55391 * 8 7 6 10 10 C 1.50699 * 120.34714 * 179.71766 * 9 8 7 11 11 O 1.42903 * 109.46776 * 119.71969 * 10 9 8 12 12 Si 1.86299 * 109.47225 * 359.72205 * 10 9 8 13 13 C 1.38351 * 119.30133 * 359.43715 * 9 8 7 14 14 C 1.46502 * 120.00001 * 179.97438 * 2 1 3 15 15 H 1.09003 * 109.47194 * 179.97438 * 14 2 1 16 16 C 1.52995 * 109.47377 * 299.99947 * 14 2 1 17 17 C 1.53001 * 109.47207 * 179.97438 * 16 14 2 18 18 C 1.53001 * 109.47111 * 300.00307 * 17 16 14 19 19 H 1.09002 * 109.46995 * 180.02562 * 18 17 16 20 20 O 1.42909 * 109.46907 * 299.99917 * 18 17 16 21 21 C 1.52995 * 109.47336 * 59.99772 * 18 17 16 22 22 C 1.53001 * 109.47207 * 300.00169 * 21 18 17 23 23 H 1.08996 * 109.47122 * 85.12635 * 1 2 3 24 24 H 1.09002 * 109.46928 * 205.12118 * 1 2 3 25 25 H 1.08992 * 109.47103 * 325.12085 * 1 2 3 26 26 H 1.07999 * 119.71520 * 0.02651 * 6 5 3 27 27 H 1.07995 * 119.46108 * 180.26770 * 8 7 6 28 28 H 1.09000 * 109.47157 * 239.71607 * 10 9 8 29 29 H 0.96700 * 114.00073 * 299.99524 * 11 10 9 30 30 H 1.48495 * 110.00431 * 58.68068 * 12 10 9 31 31 H 1.48502 * 109.99706 * 180.02562 * 12 10 9 32 32 H 1.07999 * 120.85756 * 180.30218 * 13 9 8 33 33 H 1.08998 * 109.46989 * 300.00155 * 16 14 2 34 34 H 1.09003 * 109.46777 * 59.99804 * 16 14 2 35 35 H 1.08999 * 109.46789 * 180.02562 * 17 16 14 36 36 H 1.08994 * 109.47022 * 60.00312 * 17 16 14 37 37 H 0.96706 * 114.00010 * 299.99865 * 20 18 17 38 38 H 1.08998 * 109.46989 * 179.97438 * 21 18 17 39 39 H 1.08994 * 109.46875 * 59.99947 * 21 18 17 40 40 H 1.09003 * 109.47332 * 299.99758 * 22 21 18 41 41 H 1.08998 * 109.47264 * 179.97438 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3512 1.1690 -0.0888 5 6 1.4036 2.4452 0.1081 6 6 0.1846 2.6199 -0.5477 7 7 -0.4703 3.7585 -0.4519 8 6 -0.0114 4.7683 0.2624 9 6 1.1929 4.6766 0.9374 10 6 1.7046 5.8426 1.7435 11 8 1.8473 5.4506 3.1103 12 14 0.4972 7.2565 1.6257 13 6 1.9194 3.5012 0.8695 14 6 2.1975 -1.2687 0.0006 15 1 3.2692 -1.0696 0.0000 16 6 1.8280 -2.0705 1.2501 17 6 2.5925 -3.3958 1.2503 18 6 2.2224 -4.1983 0.0014 19 1 2.7667 -5.1427 0.0018 20 8 0.8172 -4.4590 0.0018 21 6 2.5919 -3.3966 -1.2481 22 6 1.8274 -2.0713 -1.2484 23 1 -0.3633 0.0873 -1.0239 24 1 -0.3633 -0.9305 0.4363 25 1 -0.3633 0.8430 0.5876 26 1 -0.2255 1.8145 -1.1389 27 1 -0.5828 5.6830 0.3174 28 1 2.6722 6.1575 1.3529 29 1 1.0235 5.1577 3.5235 30 1 -0.8345 6.8303 2.1257 31 1 0.9908 8.4129 2.4160 32 1 2.8601 3.4005 1.3905 33 1 2.0913 -1.4985 2.1398 34 1 0.7563 -2.2696 1.2502 35 1 2.3288 -3.9671 2.1404 36 1 3.6642 -3.1970 1.2501 37 1 0.5112 -4.9648 0.7671 38 1 2.3286 -3.9685 -2.1378 39 1 3.6636 -3.1978 -1.2484 40 1 0.7556 -2.2700 -1.2481 41 1 2.0910 -1.4999 -2.1383 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:40:14 Heat of formation + Delta-G solvation = -69.368373 kcal Electronic energy + Delta-G solvation = -24156.565332 eV Core-core repulsion = 20617.256760 eV Total energy + Delta-G solvation = -3539.308572 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.17827 -40.92249 -39.62792 -38.10768 -37.19241 -35.16558 -33.82440 -33.08898 -31.86937 -30.07886 -28.25652 -27.18352 -25.88425 -23.89370 -23.78837 -23.02079 -20.95238 -20.49666 -19.01191 -18.39301 -17.96250 -17.89074 -17.57435 -17.35451 -16.70933 -16.42152 -16.27145 -15.74555 -15.53839 -15.05991 -14.82538 -14.59239 -14.45004 -14.37758 -14.15139 -14.03226 -13.52305 -13.33665 -13.25078 -13.06110 -12.95546 -12.82502 -12.43859 -12.09469 -12.09325 -11.51313 -11.46776 -11.23801 -11.14445 -10.74058 -10.69737 -10.55919 -10.27846 -9.80535 -4.94179 -0.52298 -0.06481 1.21451 1.43971 1.57904 1.73878 1.94920 2.49936 3.06466 3.28194 3.30615 3.37838 3.53533 3.61285 3.67201 3.69235 3.71677 3.93193 4.04234 4.08649 4.11654 4.17235 4.26630 4.33980 4.42373 4.46808 4.49745 4.54812 4.60389 4.72167 4.81206 4.85102 4.90684 4.95029 5.01587 5.11006 5.11622 5.24131 5.29693 5.34246 5.44470 6.12417 6.39882 6.63012 6.85968 6.92221 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.597 5.597 3 C 0.561 3.439 4 O -0.575 6.575 5 C -0.192 4.192 6 C 0.137 3.863 7 N -0.490 5.490 8 C 0.126 3.874 9 C -0.170 4.170 10 C -0.082 4.082 11 O -0.547 6.547 12 Si 0.774 3.226 13 C -0.006 4.006 14 C 0.140 3.860 15 H 0.077 0.923 16 C -0.117 4.117 17 C -0.147 4.147 18 C 0.106 3.894 19 H 0.066 0.934 20 O -0.577 6.577 21 C -0.114 4.114 22 C -0.115 4.115 23 H 0.082 0.918 24 H 0.094 0.906 25 H 0.078 0.922 26 H 0.190 0.810 27 H 0.185 0.815 28 H 0.128 0.872 29 H 0.388 0.612 30 H -0.270 1.270 31 H -0.298 1.298 32 H 0.134 0.866 33 H 0.055 0.945 34 H 0.082 0.918 35 H 0.084 0.916 36 H 0.071 0.929 37 H 0.391 0.609 38 H 0.073 0.927 39 H 0.079 0.921 40 H 0.079 0.921 41 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.385 -2.100 0.047 4.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.328 5.328 3 C 0.349 3.651 4 O -0.456 6.456 5 C -0.197 4.197 6 C -0.021 4.021 7 N -0.198 5.198 8 C -0.030 4.030 9 C -0.173 4.173 10 C -0.191 4.191 11 O -0.355 6.355 12 Si 0.677 3.323 13 C -0.033 4.033 14 C 0.037 3.963 15 H 0.095 0.905 16 C -0.155 4.155 17 C -0.185 4.185 18 C 0.047 3.953 19 H 0.084 0.916 20 O -0.385 6.385 21 C -0.152 4.152 22 C -0.153 4.153 23 H 0.100 0.900 24 H 0.112 0.888 25 H 0.097 0.903 26 H 0.207 0.793 27 H 0.201 0.799 28 H 0.145 0.855 29 H 0.237 0.763 30 H -0.195 1.195 31 H -0.225 1.225 32 H 0.152 0.848 33 H 0.073 0.927 34 H 0.101 0.899 35 H 0.103 0.897 36 H 0.090 0.910 37 H 0.241 0.759 38 H 0.092 0.908 39 H 0.098 0.902 40 H 0.098 0.902 41 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -4.454 -1.020 -0.681 4.619 hybrid contribution 1.051 -1.125 1.985 2.513 sum -3.402 -2.145 1.304 4.228 Atomic orbital electron populations 1.22404 0.77537 1.04899 1.03327 1.47880 1.08325 1.04985 1.71577 1.18392 0.86499 0.84253 0.75913 1.90784 1.15397 1.87653 1.51718 1.20913 0.98592 0.95543 1.04694 1.23768 0.88742 0.95540 0.94043 1.67867 1.34069 1.00451 1.17382 1.23243 0.92118 0.97605 0.89991 1.21347 0.96871 0.97093 1.01948 1.25288 1.11254 1.00835 0.81700 1.86610 1.38257 1.86673 1.23936 0.93997 0.74348 0.74016 0.89955 1.21547 0.98257 0.90743 0.92731 1.21190 0.96754 0.81950 0.96374 0.90501 1.21727 1.02030 0.95688 0.96048 1.22209 1.00985 0.96116 0.99205 1.21759 0.82229 0.97034 0.94260 0.91567 1.86477 1.23190 1.78208 1.50665 1.21556 1.00412 0.95291 0.97958 1.21696 1.01940 0.95410 0.96267 0.89960 0.88769 0.90304 0.79324 0.79853 0.85465 0.76263 1.19542 1.22537 0.84771 0.92667 0.89900 0.89718 0.91019 0.75915 0.90807 0.90220 0.90238 0.92524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.30 7.90 127.77 1.01 0.71 16 2 N -0.60 -0.98 2.76 -826.02 -2.28 -3.26 16 3 C 0.56 4.13 7.38 86.78 0.64 4.77 16 4 O -0.58 -9.02 16.27 -3.90 -0.06 -9.08 16 5 C -0.19 -0.73 5.26 -19.99 -0.11 -0.83 16 6 C 0.14 0.04 8.76 85.02 0.74 0.78 16 7 N -0.49 -0.66 10.35 -194.76 -2.01 -2.67 16 8 C 0.13 -0.17 9.84 84.71 0.83 0.67 16 9 C -0.17 0.04 5.39 -19.81 -0.11 -0.07 16 10 C -0.08 0.15 2.83 71.24 0.20 0.35 16 11 O -0.55 -0.76 12.78 -148.98 -1.90 -2.66 16 12 Si 0.77 -3.51 29.82 68.60 2.05 -1.47 16 13 C -0.01 -0.02 9.38 22.73 0.21 0.19 16 14 C 0.14 0.24 2.51 44.99 0.11 0.36 16 15 H 0.08 0.54 6.91 -2.39 -0.02 0.52 16 16 C -0.12 0.19 5.05 30.59 0.15 0.34 16 17 C -0.15 0.56 5.64 30.59 0.17 0.74 16 18 C 0.11 -0.36 3.77 30.59 0.12 -0.24 16 19 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 20 O -0.58 1.63 11.97 -148.98 -1.78 -0.15 16 21 C -0.11 0.14 5.66 30.59 0.17 0.32 16 22 C -0.11 -0.01 5.06 30.59 0.15 0.15 16 23 H 0.08 -0.66 6.88 -2.39 -0.02 -0.68 16 24 H 0.09 -0.65 6.44 -2.39 -0.02 -0.66 16 25 H 0.08 -0.43 5.83 -2.39 -0.01 -0.44 16 26 H 0.19 -0.87 5.25 -2.91 -0.02 -0.88 16 27 H 0.19 -1.21 4.88 -2.91 -0.01 -1.22 16 28 H 0.13 -0.34 7.96 -2.39 -0.02 -0.36 16 29 H 0.39 -1.86 8.70 -74.06 -0.64 -2.51 16 30 H -0.27 0.53 7.11 99.48 0.71 1.24 16 31 H -0.30 -1.03 7.11 99.48 0.71 -0.32 16 32 H 0.13 0.80 8.06 -2.91 -0.02 0.77 16 33 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 34 H 0.08 -0.26 6.20 -2.39 -0.01 -0.27 16 35 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 36 H 0.07 -0.20 8.14 -2.39 -0.02 -0.21 16 37 H 0.39 -3.85 9.08 -74.05 -0.67 -4.52 16 38 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 39 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 40 H 0.08 -0.02 7.21 -2.39 -0.02 -0.04 16 41 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 Total: 0.00 -19.79 322.98 -1.89 -21.68 By element: Atomic # 1 Polarization: -10.41 SS G_CDS: -0.21 Total: -10.61 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: 4.31 Total: 8.22 kcal Atomic # 7 Polarization: -1.64 SS G_CDS: -4.30 Total: -5.93 kcal Atomic # 8 Polarization: -8.15 SS G_CDS: -3.75 Total: -11.90 kcal Atomic # 14 Polarization: -3.51 SS G_CDS: 2.05 Total: -1.47 kcal Total: -19.79 -1.89 -21.68 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.686 kcal (2) G-P(sol) polarization free energy of solvation -19.791 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.478 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.682 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.368 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds