Wall clock time and date at job start Sun Mar 7 2021 05:40:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34776 * 120.00238 * 2 1 4 4 O 1.21592 * 120.00137 * 184.34674 * 3 2 1 5 5 C 1.47556 * 119.99730 * 4.35095 * 3 2 1 6 6 C 1.39834 * 120.00510 * 147.60001 * 5 3 2 7 7 C 1.36560 * 120.00443 * 180.29664 * 6 5 3 8 8 C 1.39827 * 119.99755 * 359.45379 * 7 6 5 9 9 C 1.47556 * 119.99904 * 180.27608 * 8 7 6 10 10 C 1.34976 * 125.27807 * 359.97438 * 9 8 7 11 11 C 1.37804 * 114.70307 * 179.83243 * 10 9 8 12 12 C 1.33734 * 115.07750 * 0.46464 * 11 10 9 13 13 C 1.50705 * 125.11700 * 179.77746 * 12 11 10 14 14 O 1.42902 * 109.46803 * 299.99620 * 13 12 11 15 15 Si 1.86299 * 109.47162 * 179.97438 * 13 12 11 16 16 S 1.75854 * 109.76656 * 359.74957 * 12 11 10 17 17 C 1.39826 * 120.00021 * 0.55134 * 8 7 6 18 18 C 1.36557 * 120.00224 * 359.72355 * 17 8 7 19 19 C 1.46507 * 120.00137 * 179.97438 * 2 1 3 20 20 H 1.08998 * 109.47047 * 179.97438 * 19 2 1 21 21 C 1.52995 * 109.47326 * 300.00579 * 19 2 1 22 22 C 1.52998 * 109.47196 * 179.97438 * 21 19 2 23 23 C 1.52998 * 109.47082 * 300.00124 * 22 21 19 24 24 H 1.09003 * 109.47344 * 180.02562 * 23 22 21 25 25 O 1.42904 * 109.47139 * 299.99908 * 23 22 21 26 26 C 1.53004 * 109.47395 * 59.99864 * 23 22 21 27 27 C 1.53000 * 109.46541 * 60.00289 * 19 2 1 28 28 H 1.08997 * 109.47043 * 94.96104 * 1 2 3 29 29 H 1.08995 * 109.46990 * 214.95875 * 1 2 3 30 30 H 1.08994 * 109.46895 * 334.95979 * 1 2 3 31 31 H 1.08003 * 119.99825 * 0.02562 * 6 5 3 32 32 H 1.07996 * 120.00283 * 179.72042 * 7 6 5 33 33 H 1.08009 * 122.64716 * 0.02562 * 10 9 8 34 34 H 1.08004 * 122.45807 * 180.21711 * 11 10 9 35 35 H 1.08992 * 109.47519 * 59.99307 * 13 12 11 36 36 H 0.96702 * 114.00276 * 180.02562 * 14 13 12 37 37 H 1.48501 * 109.99616 * 298.67791 * 15 13 12 38 38 H 1.48499 * 110.00156 * 59.99432 * 15 13 12 39 39 H 1.08002 * 119.99731 * 179.75634 * 17 8 7 40 40 H 1.08005 * 120.00276 * 179.97438 * 18 17 8 41 41 H 1.08998 * 109.46955 * 299.99870 * 21 19 2 42 42 H 1.08998 * 109.47241 * 59.99832 * 21 19 2 43 43 H 1.08995 * 109.47256 * 179.97438 * 22 21 19 44 44 H 1.08998 * 109.46914 * 59.99937 * 22 21 19 45 45 H 0.96705 * 113.99793 * 299.99862 * 25 23 22 46 46 H 1.09000 * 109.46958 * 180.02562 * 26 23 22 47 47 H 1.08998 * 109.47131 * 59.99863 * 26 23 22 48 48 H 1.08998 * 109.47452 * 299.99817 * 27 19 2 49 49 H 1.09006 * 109.47309 * 60.00446 * 27 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3522 1.1687 -0.0798 5 6 1.4043 2.4432 0.0969 6 6 1.9830 3.5352 0.7511 7 6 1.3006 4.7143 0.8461 8 6 0.0279 4.8331 0.2793 9 6 -0.7068 6.1090 0.3766 10 6 -0.2540 7.2249 0.9862 11 6 -1.1201 8.2959 0.9443 12 6 -2.2779 8.0643 0.3164 13 6 -3.3864 9.0705 0.1430 14 8 -3.8478 9.4968 1.4266 15 14 -4.7934 8.2888 -0.7951 16 16 -2.3120 6.4093 -0.2770 17 6 -0.5508 3.7412 -0.3748 18 6 0.1292 2.5604 -0.4649 19 6 2.1976 -1.2688 0.0006 20 1 3.2692 -1.0696 0.0000 21 6 1.8279 -2.0706 1.2500 22 6 2.5925 -3.3958 1.2503 23 6 2.2224 -4.1983 0.0013 24 1 2.7667 -5.1427 0.0017 25 8 0.8173 -4.4590 0.0016 26 6 2.5921 -3.3965 -1.2483 27 6 1.8279 -2.0715 -1.2484 28 1 -0.3633 -0.0889 -1.0238 29 1 -0.3633 -0.8422 0.5888 30 1 -0.3633 0.9310 0.4349 31 1 2.9679 3.4449 1.1850 32 1 1.7457 5.5563 1.3552 33 1 0.7124 7.2753 1.4661 34 1 -0.8829 9.2509 1.3895 35 1 -3.0130 9.9304 -0.4128 36 1 -4.5634 10.1463 1.3916 37 1 -4.3341 7.8703 -2.1438 38 1 -5.3117 7.1147 -0.0481 39 1 -1.5355 3.8318 -0.8091 40 1 -0.3180 1.7168 -0.9697 41 1 2.0912 -1.4987 2.1398 42 1 0.7563 -2.2698 1.2501 43 1 2.3295 -3.9669 2.1406 44 1 3.6641 -3.1970 1.2500 45 1 0.5113 -4.9649 0.7668 46 1 2.3280 -3.9681 -2.1380 47 1 3.6637 -3.1976 -1.2485 48 1 0.7563 -2.2707 -1.2484 49 1 2.0913 -1.5003 -2.1386 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:40:22 Heat of formation + Delta-G solvation = -36.365941 kcal Electronic energy + Delta-G solvation = -30978.224417 eV Core-core repulsion = 26770.945296 eV Total energy + Delta-G solvation = -4207.279122 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.138 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.76896 -40.41530 -39.53312 -38.86905 -37.45713 -37.07916 -35.17142 -33.48952 -32.38025 -31.89307 -30.91479 -29.73846 -28.18490 -27.10071 -24.68751 -24.25281 -23.80804 -23.33736 -22.82628 -20.99023 -20.51981 -20.14412 -18.68691 -18.48974 -18.20440 -17.82797 -17.56446 -17.16428 -16.65418 -16.45620 -16.21593 -15.78947 -15.67908 -15.59289 -15.35614 -14.98361 -14.72477 -14.59432 -14.45257 -14.29574 -14.18920 -14.09096 -14.00851 -13.57775 -13.33083 -13.24066 -13.23049 -13.13100 -13.06594 -12.78748 -12.64716 -12.44637 -12.19583 -12.11987 -12.07569 -11.73925 -11.43628 -11.29435 -10.96581 -10.77134 -10.65484 -10.38612 -10.14631 -9.65732 -9.56536 -9.00807 -5.31150 -0.85035 0.27919 0.32750 0.42225 0.75082 1.12370 1.48339 1.60801 1.84276 1.85969 1.98853 2.77465 3.23913 3.27501 3.36283 3.49836 3.63724 3.66923 3.72236 3.77094 3.79930 3.90571 4.02379 4.04026 4.14685 4.19931 4.26145 4.27709 4.29713 4.40170 4.41050 4.44125 4.48073 4.55756 4.56698 4.62365 4.67911 4.84082 4.86798 4.89019 4.97374 4.98640 5.06912 5.09625 5.11401 5.21201 5.24465 5.25763 5.31342 5.37552 5.46065 5.53884 5.72562 6.33109 6.47974 6.65258 7.15320 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.604 5.604 3 C 0.560 3.440 4 O -0.533 6.533 5 C -0.132 4.132 6 C -0.054 4.054 7 C -0.108 4.108 8 C 0.010 3.990 9 C -0.143 4.143 10 C -0.119 4.119 11 C -0.098 4.098 12 C -0.175 4.175 13 C -0.034 4.034 14 O -0.543 6.543 15 Si 0.668 3.332 16 S 0.109 5.891 17 C -0.122 4.122 18 C -0.092 4.092 19 C 0.141 3.859 20 H 0.101 0.899 21 C -0.123 4.123 22 C -0.150 4.150 23 C 0.103 3.897 24 H 0.058 0.942 25 O -0.564 6.564 26 C -0.110 4.110 27 C -0.123 4.123 28 H 0.063 0.937 29 H 0.075 0.925 30 H 0.091 0.909 31 H 0.138 0.862 32 H 0.135 0.865 33 H 0.148 0.852 34 H 0.148 0.852 35 H 0.085 0.915 36 H 0.385 0.615 37 H -0.239 1.239 38 H -0.235 1.235 39 H 0.127 0.873 40 H 0.147 0.853 41 H 0.065 0.935 42 H 0.074 0.926 43 H 0.070 0.930 44 H 0.075 0.925 45 H 0.377 0.623 46 H 0.074 0.926 47 H 0.078 0.922 48 H 0.076 0.924 49 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.707 1.129 0.568 4.874 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.336 5.336 3 C 0.349 3.651 4 O -0.411 6.411 5 C -0.135 4.135 6 C -0.073 4.073 7 C -0.128 4.128 8 C 0.008 3.992 9 C -0.259 4.259 10 C -0.150 4.150 11 C -0.128 4.128 12 C -0.292 4.292 13 C -0.147 4.147 14 O -0.349 6.349 15 Si 0.567 3.433 16 S 0.376 5.624 17 C -0.141 4.141 18 C -0.110 4.110 19 C 0.038 3.962 20 H 0.119 0.881 21 C -0.162 4.162 22 C -0.188 4.188 23 C 0.044 3.956 24 H 0.076 0.924 25 O -0.369 6.369 26 C -0.148 4.148 27 C -0.161 4.161 28 H 0.081 0.919 29 H 0.093 0.907 30 H 0.109 0.891 31 H 0.156 0.844 32 H 0.153 0.847 33 H 0.165 0.835 34 H 0.165 0.835 35 H 0.103 0.897 36 H 0.233 0.767 37 H -0.162 1.162 38 H -0.159 1.159 39 H 0.145 0.855 40 H 0.165 0.835 41 H 0.083 0.917 42 H 0.092 0.908 43 H 0.089 0.911 44 H 0.094 0.906 45 H 0.224 0.776 46 H 0.093 0.907 47 H 0.097 0.903 48 H 0.094 0.906 49 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -4.966 -0.539 -1.060 5.106 hybrid contribution 1.391 0.658 1.483 2.138 sum -3.575 0.119 0.424 3.602 Atomic orbital electron populations 1.22483 0.79765 1.04357 1.02072 1.47755 1.07065 1.05627 1.73133 1.18315 0.87049 0.83538 0.76189 1.90802 1.13526 1.87128 1.49636 1.19956 0.95470 0.94599 1.03489 1.20906 0.99546 0.91033 0.95781 1.20921 0.93509 0.98234 1.00116 1.18287 0.93487 0.90494 0.96902 1.23093 0.98558 0.97406 1.06883 1.20403 1.01585 0.91581 1.01392 1.19996 0.92412 1.00644 0.99776 1.23715 0.99565 0.97310 1.08569 1.23975 1.00543 0.98796 0.91431 1.86510 1.57422 1.64560 1.26453 0.94897 0.83986 0.84623 0.79778 1.84159 1.14727 1.06782 1.56747 1.20912 1.00462 0.92424 1.00271 1.21531 0.93179 0.98186 0.98070 1.21160 0.98000 0.81938 0.95103 0.88095 1.21776 1.01437 0.95528 0.97435 1.22219 1.01384 0.96645 0.98578 1.21806 0.82133 0.96827 0.94839 0.92432 1.86517 1.23155 1.77771 1.49491 1.21511 1.00353 0.95568 0.97384 1.21768 1.01782 0.95349 0.97234 0.91891 0.90665 0.89122 0.84407 0.84700 0.83453 0.83453 0.89748 0.76709 1.16244 1.15863 0.85469 0.83547 0.91660 0.90758 0.91135 0.90613 0.77621 0.90704 0.90314 0.90571 0.91653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.07 7.88 59.85 0.47 0.40 16 2 N -0.60 -0.89 2.76 -175.16 -0.48 -1.38 16 3 C 0.56 2.18 7.42 -12.46 -0.09 2.09 16 4 O -0.53 -3.91 16.09 5.28 0.09 -3.83 16 5 C -0.13 -0.32 5.47 -104.90 -0.57 -0.89 16 6 C -0.05 -0.11 9.54 -39.59 -0.38 -0.49 16 7 C -0.11 -0.14 9.48 -39.59 -0.38 -0.51 16 8 C 0.01 0.02 5.88 -104.91 -0.62 -0.60 16 9 C -0.14 -0.33 6.37 -36.94 -0.24 -0.56 16 10 C -0.12 -0.18 9.64 -40.90 -0.39 -0.57 16 11 C -0.10 -0.17 10.00 -41.32 -0.41 -0.59 16 12 C -0.17 -0.38 5.76 -35.89 -0.21 -0.58 16 13 C -0.03 0.01 2.95 36.01 0.11 0.12 16 14 O -0.54 0.11 12.83 -35.23 -0.45 -0.34 16 15 Si 0.67 -0.77 30.96 -169.99 -5.26 -6.04 16 16 S 0.11 0.27 19.46 -107.50 -2.09 -1.83 16 17 C -0.12 -0.14 9.54 -39.59 -0.38 -0.52 16 18 C -0.09 -0.06 7.36 -39.59 -0.29 -0.35 16 19 C 0.14 0.17 2.52 -67.93 -0.17 0.00 16 20 H 0.10 0.32 6.91 -51.93 -0.36 -0.04 16 21 C -0.12 0.02 5.03 -26.73 -0.13 -0.11 16 22 C -0.15 0.19 5.64 -26.73 -0.15 0.04 16 23 C 0.10 -0.09 3.77 -26.73 -0.10 -0.19 16 24 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 25 O -0.56 0.19 11.97 -35.23 -0.42 -0.23 16 26 C -0.11 0.02 5.66 -26.75 -0.15 -0.13 16 27 C -0.12 -0.08 5.06 -26.75 -0.14 -0.21 16 28 H 0.06 -0.14 7.45 -51.93 -0.39 -0.53 16 29 H 0.07 -0.14 6.45 -51.93 -0.33 -0.48 16 30 H 0.09 -0.15 4.70 -51.93 -0.24 -0.39 16 31 H 0.14 0.24 7.95 -52.48 -0.42 -0.18 16 32 H 0.14 -0.10 6.74 -52.49 -0.35 -0.45 16 33 H 0.15 -0.10 6.88 -52.48 -0.36 -0.46 16 34 H 0.15 0.05 8.06 -52.48 -0.42 -0.37 16 35 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 36 H 0.38 -2.07 8.74 45.56 0.40 -1.67 16 37 H -0.24 -0.26 7.11 56.52 0.40 0.14 16 38 H -0.24 -0.45 7.11 56.52 0.40 -0.05 16 39 H 0.13 0.00 7.26 -52.49 -0.38 -0.38 16 40 H 0.15 -0.21 4.83 -52.48 -0.25 -0.46 16 41 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 42 H 0.07 -0.03 6.23 -51.93 -0.32 -0.35 16 43 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 44 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 45 H 0.38 -1.41 9.08 45.56 0.41 -1.00 16 46 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 47 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 48 H 0.08 0.08 7.21 -51.93 -0.37 -0.30 16 49 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 LS Contribution 396.70 15.07 5.98 5.98 Total: 0.00 -9.24 396.70 -12.84 -22.08 By element: Atomic # 1 Polarization: -4.79 SS G_CDS: -5.97 Total: -10.76 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -4.22 Total: -3.66 kcal Atomic # 7 Polarization: -0.89 SS G_CDS: -0.48 Total: -1.38 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -0.79 Total: -4.40 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.26 Total: -6.04 kcal Atomic # 16 Polarization: 0.27 SS G_CDS: -2.09 Total: -1.83 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -9.24 -12.84 -22.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.285 kcal (2) G-P(sol) polarization free energy of solvation -9.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.081 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.366 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds