Wall clock time and date at job start Sun Mar 7 2021 05:40:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46893 * 1 3 3 C 1.46903 * 111.00302 * 2 1 4 4 C 1.39043 * 111.00101 * 236.04513 * 2 1 3 5 5 C 1.39199 * 119.93314 * 240.00203 * 4 2 1 6 6 C 1.50701 * 119.96285 * 359.97438 * 5 4 2 7 7 O 1.42907 * 109.47207 * 75.00041 * 6 5 4 8 8 Si 1.86302 * 109.47236 * 194.99699 * 6 5 4 9 9 C 1.37627 * 120.07210 * 180.02562 * 5 4 2 10 10 C 1.39775 * 119.92933 * 359.97438 * 9 5 4 11 11 C 1.47516 * 120.07148 * 180.02562 * 10 9 5 12 12 O 1.21598 * 119.99902 * 327.76835 * 11 10 9 13 13 N 1.34777 * 120.00276 * 147.76471 * 11 10 9 14 14 C 1.46495 * 119.99849 * 4.33835 * 13 11 10 15 15 C 1.46502 * 119.99911 * 184.33794 * 13 11 10 16 16 H 1.09003 * 109.47472 * 0.02562 * 15 13 11 17 17 C 1.53004 * 109.46851 * 120.00115 * 15 13 11 18 18 C 1.53000 * 109.46763 * 180.02562 * 17 15 13 19 19 C 1.53009 * 109.47046 * 299.99557 * 18 17 15 20 20 H 1.08996 * 109.46973 * 180.02562 * 19 18 17 21 21 O 1.42894 * 109.46897 * 300.00324 * 19 18 17 22 22 C 1.53001 * 109.46798 * 60.00250 * 19 18 17 23 23 C 1.52993 * 109.47038 * 239.99917 * 15 13 11 24 24 C 1.39816 * 119.86264 * 359.97438 * 10 9 5 25 25 C 1.37589 * 119.93252 * 359.74403 * 24 10 9 26 26 H 1.09000 * 109.47780 * 183.95291 * 1 2 3 27 27 H 1.09005 * 109.47191 * 63.95506 * 1 2 3 28 28 H 1.09002 * 109.47338 * 303.95813 * 1 2 3 29 29 H 1.09001 * 109.47165 * 56.04636 * 3 2 1 30 30 H 1.09000 * 109.47359 * 176.04309 * 3 2 1 31 31 H 1.08998 * 109.47110 * 296.04478 * 3 2 1 32 32 H 1.08997 * 109.47628 * 315.00138 * 6 5 4 33 33 H 0.96703 * 113.99921 * 300.00232 * 7 6 5 34 34 H 1.48502 * 110.00059 * 298.68762 * 8 6 5 35 35 H 1.48500 * 109.99547 * 60.00043 * 8 6 5 36 36 H 1.08000 * 120.03844 * 179.97438 * 9 5 4 37 37 H 1.09000 * 109.47153 * 94.80990 * 14 13 11 38 38 H 1.09010 * 109.46819 * 214.80771 * 14 13 11 39 39 H 1.09001 * 109.47374 * 334.80645 * 14 13 11 40 40 H 1.09003 * 109.46935 * 299.99326 * 17 15 13 41 41 H 1.08992 * 109.47265 * 60.00201 * 17 15 13 42 42 H 1.09007 * 109.47073 * 180.02562 * 18 17 15 43 43 H 1.08997 * 109.47570 * 59.99676 * 18 17 15 44 44 H 0.96698 * 114.00681 * 299.99910 * 21 19 18 45 45 H 1.09001 * 109.46644 * 179.97438 * 22 19 18 46 46 H 1.09003 * 109.46741 * 60.00156 * 22 19 18 47 47 H 1.09009 * 109.47406 * 300.00076 * 23 15 13 48 48 H 1.09000 * 109.47214 * 60.00108 * 23 15 13 49 49 H 1.08005 * 120.03612 * 180.02562 * 24 10 9 50 50 H 1.07997 * 119.97077 * 180.24614 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9672 -0.7250 -1.0767 5 6 2.7792 -1.8330 -0.8518 6 6 3.1173 -2.2446 0.5580 7 8 1.9823 -2.8745 1.1555 8 14 4.5471 -3.4387 0.5303 9 6 3.2744 -2.5524 -1.9154 10 6 2.9608 -2.1697 -3.2227 11 6 3.4894 -2.9389 -4.3651 12 8 4.5772 -3.4764 -4.2849 13 7 2.7668 -3.0459 -5.4976 14 6 1.5006 -2.3211 -5.6299 15 6 3.2475 -3.8872 -6.5965 16 1 4.1975 -4.3426 -6.3167 17 6 2.2214 -4.9850 -6.8848 18 6 2.7238 -5.8639 -8.0320 19 6 2.9185 -5.0062 -9.2841 20 1 3.2759 -5.6325 -10.1014 21 8 1.6729 -4.4097 -9.6511 22 6 3.9444 -3.9084 -8.9957 23 6 3.4417 -3.0292 -7.8482 24 6 2.1441 -1.0569 -3.4453 25 6 1.6474 -0.3453 -2.3777 26 1 -0.3634 -1.0252 0.0708 27 1 -0.3634 0.4512 -0.9233 28 1 -0.3634 0.5740 0.8524 29 1 1.5898 1.9164 0.8524 30 1 3.0828 1.3432 0.0709 31 1 1.7044 1.8723 -0.9233 32 1 3.3911 -1.3634 1.1381 33 1 1.1988 -2.3097 1.2033 34 1 4.1755 -4.6585 -0.2308 35 1 5.7338 -2.7957 -0.0888 36 1 3.9047 -3.4118 -1.7403 37 1 1.6763 -1.3722 -6.1367 38 1 0.7986 -2.9190 -6.2113 39 1 1.0846 -2.1328 -4.6401 40 1 2.0831 -5.5963 -5.9930 41 1 1.2714 -4.5299 -7.1644 42 1 1.9926 -6.6458 -8.2377 43 1 3.6738 -6.3190 -7.7520 44 1 0.9740 -5.0481 -9.8485 45 1 4.0834 -3.2978 -9.8878 46 1 4.8945 -4.3636 -8.7157 47 1 2.4915 -2.5741 -8.1279 48 1 4.1726 -2.2471 -7.6429 49 1 1.8996 -0.7589 -4.4542 50 1 1.0132 0.5120 -2.5488 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:40:36 Heat of formation + Delta-G solvation = -57.196847 kcal Electronic energy + Delta-G solvation = -30579.616450 eV Core-core repulsion = 26574.222818 eV Total energy + Delta-G solvation = -4005.393632 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.193 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.01368 -40.96430 -39.70862 -37.71328 -37.33711 -37.10746 -35.07740 -32.89483 -31.91405 -31.54634 -29.95594 -28.77349 -28.25738 -26.75973 -26.20115 -23.85133 -23.79789 -23.03101 -22.34568 -20.81756 -20.49079 -18.67651 -18.22770 -17.86214 -17.73823 -17.47162 -17.01682 -16.70742 -16.37978 -16.17870 -15.98525 -15.74341 -15.48717 -15.25813 -14.97103 -14.70320 -14.50999 -14.29340 -14.23795 -14.01130 -13.74489 -13.66480 -13.52145 -13.32672 -13.28765 -13.12707 -13.07977 -12.85668 -12.76349 -12.54860 -12.41085 -12.14406 -12.01113 -11.47846 -11.32958 -11.26986 -11.01320 -10.88775 -10.71837 -10.12933 -9.85019 -9.73985 -9.65927 -4.72646 -0.35359 0.09799 1.48813 1.64138 1.79890 1.84433 2.10290 2.51802 2.60415 3.21734 3.34039 3.50460 3.62992 3.63412 3.68209 3.83482 3.87804 3.94799 4.00345 4.01571 4.10928 4.12267 4.14841 4.16909 4.25290 4.34162 4.36549 4.37210 4.40666 4.41570 4.44815 4.54780 4.56940 4.63039 4.70113 4.74088 4.77133 4.83529 4.85901 4.96276 4.99239 5.05322 5.07115 5.10629 5.18354 5.21833 5.33808 5.44070 5.52493 5.59244 6.10671 6.27195 6.63265 6.69628 7.09097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.516 5.516 3 C 0.026 3.974 4 C 0.124 3.876 5 C -0.096 4.096 6 C -0.065 4.065 7 O -0.533 6.533 8 Si 0.735 3.265 9 C -0.058 4.058 10 C -0.129 4.129 11 C 0.559 3.441 12 O -0.533 6.533 13 N -0.603 5.603 14 C 0.056 3.944 15 C 0.140 3.860 16 H 0.101 0.899 17 C -0.124 4.124 18 C -0.150 4.150 19 C 0.103 3.897 20 H 0.058 0.942 21 O -0.564 6.564 22 C -0.110 4.110 23 C -0.122 4.122 24 C -0.086 4.086 25 C -0.154 4.154 26 H 0.073 0.927 27 H 0.035 0.965 28 H 0.080 0.920 29 H 0.079 0.921 30 H 0.072 0.928 31 H 0.034 0.966 32 H 0.081 0.919 33 H 0.365 0.635 34 H -0.252 1.252 35 H -0.247 1.247 36 H 0.135 0.865 37 H 0.063 0.937 38 H 0.076 0.924 39 H 0.089 0.911 40 H 0.065 0.935 41 H 0.074 0.926 42 H 0.070 0.930 43 H 0.075 0.925 44 H 0.377 0.623 45 H 0.075 0.925 46 H 0.078 0.922 47 H 0.076 0.924 48 H 0.065 0.935 49 H 0.147 0.853 50 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.302 2.179 -0.337 4.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.237 5.237 3 C -0.120 4.120 4 C 0.029 3.971 5 C -0.098 4.098 6 C -0.174 4.174 7 O -0.339 6.339 8 Si 0.634 3.366 9 C -0.077 4.077 10 C -0.132 4.132 11 C 0.348 3.652 12 O -0.410 6.410 13 N -0.335 5.335 14 C -0.086 4.086 15 C 0.038 3.962 16 H 0.119 0.881 17 C -0.162 4.162 18 C -0.188 4.188 19 C 0.044 3.956 20 H 0.076 0.924 21 O -0.369 6.369 22 C -0.148 4.148 23 C -0.161 4.161 24 C -0.105 4.105 25 C -0.174 4.174 26 H 0.092 0.908 27 H 0.054 0.946 28 H 0.099 0.901 29 H 0.098 0.902 30 H 0.091 0.909 31 H 0.053 0.947 32 H 0.099 0.901 33 H 0.213 0.787 34 H -0.177 1.177 35 H -0.172 1.172 36 H 0.153 0.847 37 H 0.081 0.919 38 H 0.094 0.906 39 H 0.108 0.892 40 H 0.083 0.917 41 H 0.093 0.907 42 H 0.089 0.911 43 H 0.094 0.906 44 H 0.224 0.776 45 H 0.093 0.907 46 H 0.097 0.903 47 H 0.094 0.906 48 H 0.083 0.917 49 H 0.164 0.836 50 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.257 1.309 -0.198 2.616 hybrid contribution -1.827 1.114 -1.750 2.764 sum -4.084 2.422 -1.948 5.132 Atomic orbital electron populations 1.22550 0.85049 1.03133 1.01640 1.59448 1.08971 1.14807 1.40435 1.22498 1.01301 0.86747 1.01469 1.18809 0.95607 0.93567 0.89067 1.20235 0.98217 0.94926 0.96386 1.25116 0.97401 1.05716 0.89211 1.86715 1.22243 1.42880 1.82047 0.93382 0.75481 0.78883 0.88874 1.21026 0.97066 0.98730 0.90902 1.19822 1.01580 0.98346 0.93438 1.18274 0.84494 0.80185 0.82210 1.90808 1.20355 1.47792 1.82060 1.47739 1.22552 1.47734 1.15443 1.22479 0.85729 0.96854 1.03534 1.21181 0.98897 0.90592 0.85579 0.88087 1.21779 0.99343 0.96717 0.98339 1.22225 1.02616 0.98205 0.95780 1.21806 0.85079 0.93923 0.94793 0.92389 1.86509 1.21812 1.37917 1.90710 1.21527 0.97337 0.97076 0.98879 1.21778 1.02476 0.98170 0.93634 1.21777 0.94615 0.93776 1.00353 1.21631 1.02075 1.00909 0.92762 0.90781 0.94633 0.90125 0.90197 0.90878 0.94701 0.90076 0.78716 1.17719 1.17166 0.84741 0.91873 0.90572 0.89244 0.91663 0.90734 0.91091 0.90594 0.77603 0.90676 0.90304 0.90552 0.91675 0.83554 0.85116 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.20 60.06 0.55 0.50 16 2 N -0.52 0.32 3.67 -186.86 -0.69 -0.36 16 3 C 0.03 -0.04 9.38 60.07 0.56 0.52 16 4 C 0.12 0.12 4.66 -83.86 -0.39 -0.27 16 5 C -0.10 -0.26 5.28 -104.49 -0.55 -0.81 16 6 C -0.07 -0.12 2.29 36.01 0.08 -0.04 16 7 O -0.53 -1.22 12.65 -35.23 -0.45 -1.66 16 8 Si 0.73 1.37 30.40 -169.99 -5.17 -3.80 16 9 C -0.06 -0.24 8.20 -39.23 -0.32 -0.57 16 10 C -0.13 -0.42 5.47 -104.95 -0.57 -1.00 16 11 C 0.56 2.61 7.42 -12.48 -0.09 2.52 16 12 O -0.53 -4.43 16.09 5.28 0.08 -4.34 16 13 N -0.60 -1.07 2.76 -175.17 -0.48 -1.56 16 14 C 0.06 -0.07 7.88 59.84 0.47 0.40 16 15 C 0.14 0.20 2.52 -67.93 -0.17 0.03 16 16 H 0.10 0.35 6.91 -51.93 -0.36 0.00 16 17 C -0.12 0.00 5.02 -26.73 -0.13 -0.14 16 18 C -0.15 0.17 5.64 -26.73 -0.15 0.02 16 19 C 0.10 -0.09 3.77 -26.73 -0.10 -0.19 16 20 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 21 O -0.56 0.21 11.97 -35.23 -0.42 -0.21 16 22 C -0.11 0.01 5.67 -26.71 -0.15 -0.14 16 23 C -0.12 -0.08 5.06 -26.71 -0.14 -0.21 16 24 C -0.09 -0.04 7.41 -39.23 -0.29 -0.33 16 25 C -0.15 0.01 8.53 -39.44 -0.34 -0.33 16 26 H 0.07 -0.16 7.84 -51.93 -0.41 -0.57 16 27 H 0.04 -0.09 7.08 -51.93 -0.37 -0.46 16 28 H 0.08 -0.25 8.12 -51.93 -0.42 -0.68 16 29 H 0.08 -0.21 8.12 -51.93 -0.42 -0.63 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.03 -0.07 7.33 -51.93 -0.38 -0.45 16 32 H 0.08 0.07 7.78 -51.93 -0.40 -0.33 16 33 H 0.36 0.11 8.06 45.56 0.37 0.48 16 34 H -0.25 -1.20 6.81 56.52 0.38 -0.81 16 35 H -0.25 -0.94 7.11 56.52 0.40 -0.54 16 36 H 0.14 0.73 4.81 -52.49 -0.25 0.48 16 37 H 0.06 -0.15 7.44 -51.93 -0.39 -0.54 16 38 H 0.08 -0.15 6.45 -51.92 -0.33 -0.49 16 39 H 0.09 -0.15 4.70 -51.93 -0.24 -0.40 16 40 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 41 H 0.07 -0.02 6.23 -51.93 -0.32 -0.35 16 42 H 0.07 -0.15 8.14 -51.92 -0.42 -0.57 16 43 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 44 H 0.38 -1.43 9.08 45.56 0.41 -1.01 16 45 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 46 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 47 H 0.08 0.07 7.21 -51.92 -0.37 -0.30 16 48 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 49 H 0.15 -0.25 4.82 -52.48 -0.25 -0.51 16 50 H 0.13 -0.25 6.99 -52.49 -0.37 -0.61 16 LS Contribution 378.98 15.07 5.71 5.71 Total: 0.00 -7.35 378.98 -10.25 -17.60 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -7.11 Total: -11.36 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -1.73 Total: -0.02 kcal Atomic # 7 Polarization: -0.75 SS G_CDS: -1.17 Total: -1.92 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -0.78 Total: -6.22 kcal Atomic # 14 Polarization: 1.37 SS G_CDS: -5.17 Total: -3.80 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -7.35 -10.25 -17.60 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.596 kcal (2) G-P(sol) polarization free energy of solvation -7.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.945 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.197 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds