Wall clock time and date at job start Sun Mar 7 2021 05:40:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.34773 * 120.00321 * 2 1 4 4 O 1.21611 * 120.00569 * 186.89231 * 3 2 1 5 5 C 1.47387 * 119.99677 * 6.89001 * 3 2 1 6 6 C 1.36415 * 127.19248 * 187.05552 * 5 3 2 7 7 O 1.33648 * 108.39802 * 179.97438 * 6 5 3 8 8 C 1.34215 * 110.91050 * 0.02562 * 7 6 5 9 9 C 1.50691 * 125.43957 * 180.02562 * 8 7 6 10 10 O 1.42895 * 109.47229 * 244.97103 * 9 8 7 11 11 Si 1.86301 * 109.47463 * 4.97261 * 9 8 7 12 12 C 1.34180 * 109.11983 * 359.74370 * 8 7 6 13 13 C 1.46504 * 119.99991 * 180.02562 * 2 1 3 14 14 H 1.08998 * 109.47439 * 110.06000 * 13 2 1 15 15 C 1.52999 * 109.47027 * 230.05973 * 13 2 1 16 16 C 1.53007 * 109.46925 * 60.00024 * 15 13 2 17 17 C 1.52999 * 109.47217 * 59.99894 * 16 15 13 18 18 H 1.09004 * 109.46882 * 59.99760 * 17 16 15 19 19 O 1.42898 * 109.47040 * 180.02562 * 17 16 15 20 20 C 1.53005 * 109.46879 * 300.00226 * 17 16 15 21 21 C 1.52994 * 109.47340 * 60.00061 * 20 17 16 22 22 H 1.08993 * 109.46884 * 275.34568 * 1 2 3 23 23 H 1.08997 * 109.46947 * 35.34919 * 1 2 3 24 24 H 1.08996 * 109.46792 * 155.34528 * 1 2 3 25 25 H 1.08005 * 125.80179 * 359.96916 * 6 5 3 26 26 H 1.09010 * 109.47267 * 124.97427 * 9 8 7 27 27 H 0.96704 * 113.99796 * 59.99927 * 10 9 8 28 28 H 1.48497 * 110.00250 * 179.97438 * 11 9 8 29 29 H 1.48494 * 110.00006 * 301.32299 * 11 9 8 30 30 H 1.08002 * 127.02403 * 180.26084 * 12 8 7 31 31 H 1.09003 * 109.46880 * 179.97438 * 15 13 2 32 32 H 1.08999 * 109.47053 * 300.00153 * 15 13 2 33 33 H 1.08996 * 109.46732 * 180.02562 * 16 15 13 34 34 H 1.09003 * 109.47057 * 299.99543 * 16 15 13 35 35 H 0.96701 * 114.00095 * 299.99420 * 19 17 16 36 36 H 1.09004 * 109.46983 * 299.99472 * 20 17 16 37 37 H 1.09008 * 109.46718 * 180.02562 * 20 17 16 38 38 H 1.09003 * 109.47230 * 60.00189 * 21 20 17 39 39 H 1.09001 * 109.47330 * 179.97438 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 3.3485 1.1710 -0.1264 5 6 1.4100 2.4389 0.1531 6 6 1.9189 3.6997 0.0416 7 8 0.9298 4.5738 0.2506 8 6 -0.2262 3.9388 0.4993 9 6 -1.5475 4.6069 0.7794 10 8 -1.9572 4.3109 2.1159 11 14 -1.3662 6.4502 0.5793 12 6 -0.0186 2.6139 0.4527 13 6 2.1975 -1.2688 -0.0006 14 1 2.6845 -1.4068 -0.9659 15 6 3.2545 -1.2479 1.1054 16 6 2.5709 -1.0542 2.4605 17 6 1.5954 -2.2064 2.7090 18 1 2.1405 -3.1504 2.7086 19 8 0.9566 -2.0251 3.9743 20 6 0.5385 -2.2272 1.6029 21 6 1.2220 -2.4210 0.2479 22 1 -0.3633 0.0957 1.0231 23 1 -0.3633 0.8382 -0.5946 24 1 -0.3633 -0.9340 -0.4287 25 1 2.9465 3.9491 -0.1782 26 1 -2.2971 4.2375 0.0794 27 1 -1.3361 4.6117 2.7934 28 1 -2.6627 7.1208 0.8522 29 1 -0.3244 6.9616 1.5058 30 1 -0.7511 1.8351 0.6058 31 1 3.7992 -2.1921 1.1053 32 1 3.9494 -0.4270 0.9284 33 1 3.3240 -1.0389 3.2484 34 1 2.0260 -0.1102 2.4609 35 1 1.5675 -2.0019 4.7236 36 1 -0.0065 -1.2832 1.6033 37 1 -0.1568 -3.0479 1.7802 38 1 1.7670 -3.3650 0.2475 39 1 0.4690 -2.4363 -0.5401 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:40:49 Heat of formation + Delta-G solvation = -66.627996 kcal Electronic energy + Delta-G solvation = -23652.983291 eV Core-core repulsion = 20144.301029 eV Total energy + Delta-G solvation = -3508.682262 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.135 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -43.75542 -41.63233 -39.23706 -38.18842 -37.21327 -35.29533 -33.56668 -32.20885 -31.78783 -30.25738 -27.88488 -26.62307 -25.02406 -23.84658 -22.89871 -22.45923 -20.73026 -19.96767 -18.75954 -18.23206 -17.96472 -17.57005 -17.40947 -17.22072 -16.88332 -16.19092 -15.84718 -15.76783 -15.52220 -14.85820 -14.59113 -14.44110 -14.19157 -14.08606 -13.88127 -13.81954 -13.46676 -13.28838 -12.99333 -12.78811 -12.55443 -12.20320 -12.10103 -12.02020 -11.78112 -11.27352 -11.03254 -10.83329 -10.78548 -10.45955 -9.86504 -9.54989 -5.02261 0.31853 0.83300 1.09019 1.47321 1.71836 1.89581 1.95193 2.33466 3.07978 3.15061 3.32727 3.48049 3.63461 3.77532 3.87874 3.96224 4.02314 4.07414 4.16552 4.19965 4.25461 4.29101 4.29803 4.37963 4.47432 4.51305 4.58373 4.63516 4.79697 4.88685 5.00109 5.02737 5.08683 5.12073 5.15039 5.20057 5.35949 5.61642 5.85870 6.17960 6.36142 6.68213 7.19982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.600 5.600 3 C 0.592 3.408 4 O -0.538 6.538 5 C -0.246 4.246 6 C 0.065 3.935 7 O -0.168 6.168 8 C -0.055 4.055 9 C -0.035 4.035 10 O -0.521 6.521 11 Si 0.701 3.299 12 C -0.163 4.163 13 C 0.151 3.849 14 H 0.079 0.921 15 C -0.141 4.141 16 C -0.146 4.146 17 C 0.105 3.895 18 H 0.054 0.946 19 O -0.569 6.569 20 C -0.131 4.131 21 C -0.126 4.126 22 H 0.066 0.934 23 H 0.081 0.919 24 H 0.081 0.919 25 H 0.221 0.779 26 H 0.138 0.862 27 H 0.381 0.619 28 H -0.249 1.249 29 H -0.256 1.256 30 H 0.172 0.828 31 H 0.073 0.927 32 H 0.097 0.903 33 H 0.063 0.937 34 H 0.067 0.933 35 H 0.378 0.622 36 H 0.086 0.914 37 H 0.072 0.928 38 H 0.083 0.917 39 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.477 -0.388 -1.906 2.442 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.334 5.334 3 C 0.382 3.618 4 O -0.417 6.417 5 C -0.250 4.250 6 C -0.006 4.006 7 O -0.064 6.064 8 C -0.103 4.103 9 C -0.144 4.144 10 O -0.327 6.327 11 Si 0.600 3.400 12 C -0.182 4.182 13 C 0.049 3.951 14 H 0.096 0.904 15 C -0.179 4.179 16 C -0.184 4.184 17 C 0.047 3.953 18 H 0.072 0.928 19 O -0.375 6.375 20 C -0.168 4.168 21 C -0.163 4.163 22 H 0.085 0.915 23 H 0.100 0.900 24 H 0.100 0.900 25 H 0.237 0.763 26 H 0.155 0.845 27 H 0.229 0.771 28 H -0.173 1.173 29 H -0.180 1.180 30 H 0.189 0.811 31 H 0.091 0.909 32 H 0.116 0.884 33 H 0.082 0.918 34 H 0.086 0.914 35 H 0.226 0.774 36 H 0.104 0.896 37 H 0.090 0.910 38 H 0.102 0.898 39 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.948 0.427 -2.273 3.023 hybrid contribution 0.811 -0.807 1.465 1.859 sum -1.137 -0.379 -0.807 1.445 Atomic orbital electron populations 1.22645 0.79980 1.04053 1.01854 1.47597 1.06792 1.05392 1.73583 1.17186 0.86160 0.82377 0.76035 1.90750 1.13642 1.87057 1.50234 1.21441 0.94575 0.94284 1.14750 1.24484 0.92868 0.86380 0.96894 1.83733 1.16474 1.37795 1.68384 1.22726 0.87644 0.92173 1.07773 1.24359 0.90362 1.12615 0.87102 1.86665 1.49697 1.82171 1.14207 0.94414 0.80968 0.72751 0.91821 1.23316 0.95067 0.96045 1.03814 1.21071 0.92472 0.82204 0.99385 0.90351 1.21985 0.98463 1.04186 0.93232 1.22181 0.98717 0.99759 0.97750 1.21809 0.93084 0.96559 0.83873 0.92848 1.86501 1.38461 1.96313 1.16210 1.21892 0.98029 1.04372 0.92517 1.21863 0.98967 0.98143 0.97353 0.91547 0.90037 0.90006 0.76296 0.84490 0.77055 1.17317 1.18002 0.81101 0.90852 0.88440 0.91812 0.91419 0.77440 0.89556 0.90959 0.89826 0.90209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 6.66 59.85 0.40 0.30 16 2 N -0.60 -0.33 2.33 -175.22 -0.41 -0.74 16 3 C 0.59 1.65 6.85 -12.54 -0.09 1.56 16 4 O -0.54 -2.98 14.64 5.27 0.08 -2.90 16 5 C -0.25 -0.34 6.06 -103.27 -0.63 -0.97 16 6 C 0.06 0.02 11.91 30.08 0.36 0.38 16 7 O -0.17 -0.04 8.90 7.66 0.07 0.03 16 8 C -0.05 0.01 6.18 -35.74 -0.22 -0.21 16 9 C -0.03 0.05 2.97 36.00 0.11 0.16 16 10 O -0.52 0.07 12.88 -35.23 -0.45 -0.38 16 11 Si 0.70 -1.06 32.09 -169.99 -5.46 -6.52 16 12 C -0.16 0.01 8.76 -37.46 -0.33 -0.32 16 13 C 0.15 0.01 3.08 -67.93 -0.21 -0.19 16 14 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 15 C -0.14 -0.12 5.09 -26.73 -0.14 -0.26 16 16 C -0.15 -0.11 5.37 -26.73 -0.14 -0.25 16 17 C 0.11 0.03 3.47 -26.73 -0.09 -0.06 16 18 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 19 O -0.57 -0.84 13.32 -35.23 -0.47 -1.31 16 20 C -0.13 0.07 5.12 -26.73 -0.14 -0.06 16 21 C -0.13 0.22 4.90 -26.73 -0.13 0.09 16 22 H 0.07 -0.12 5.54 -51.93 -0.29 -0.41 16 23 H 0.08 -0.18 5.35 -51.93 -0.28 -0.46 16 24 H 0.08 -0.26 5.53 -51.93 -0.29 -0.54 16 25 H 0.22 -0.41 8.06 -52.48 -0.42 -0.83 16 26 H 0.14 -0.43 7.96 -51.92 -0.41 -0.84 16 27 H 0.38 -0.99 8.70 45.56 0.40 -0.59 16 28 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 29 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 30 H 0.17 -0.26 4.87 -52.49 -0.26 -0.51 16 31 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.10 0.33 5.72 -51.93 -0.30 0.03 16 33 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.07 0.17 7.26 -51.93 -0.38 -0.20 16 35 H 0.38 -0.77 9.08 45.56 0.41 -0.36 16 36 H 0.09 -0.02 4.18 -51.93 -0.22 -0.24 16 37 H 0.07 -0.03 8.14 -51.92 -0.42 -0.45 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.08 -0.23 6.53 -51.93 -0.34 -0.56 16 LS Contribution 302.44 15.07 4.56 4.56 Total: 0.00 -7.74 302.44 -7.43 -15.17 By element: Atomic # 1 Polarization: -3.97 SS G_CDS: -4.10 Total: -8.07 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -1.25 Total: 0.16 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.41 Total: -0.74 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -0.78 Total: -4.57 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.46 Total: -6.52 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -7.74 -7.43 -15.17 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.457 kcal (2) G-P(sol) polarization free energy of solvation -7.742 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.628 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds