Wall clock time and date at job start Sun Mar 7 2021 05:40:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34779 * 119.99757 * 2 1 4 4 O 1.21278 * 119.99776 * 179.97438 * 3 2 1 5 5 C 1.50697 * 120.00008 * 0.02562 * 3 2 1 6 6 C 1.50701 * 109.47064 * 179.97438 * 5 3 2 7 7 C 1.34856 * 125.89111 * 275.00262 * 6 5 3 8 8 C 1.40887 * 107.41464 * 179.97438 * 7 6 5 9 9 C 1.34842 * 107.42115 * 359.97438 * 8 7 6 10 10 C 1.50697 * 125.89221 * 180.02562 * 9 8 7 11 11 O 1.42900 * 109.47601 * 244.97322 * 10 9 8 12 12 Si 1.86297 * 109.47093 * 4.97740 * 10 9 8 13 13 N 1.36341 * 125.88904 * 94.99975 * 6 5 3 14 14 C 1.46497 * 119.99911 * 180.02562 * 2 1 3 15 15 H 1.09000 * 109.46516 * 245.82207 * 14 2 1 16 16 C 1.53004 * 109.47341 * 5.81602 * 14 2 1 17 17 C 1.52998 * 109.46954 * 60.00566 * 16 14 2 18 18 C 1.53003 * 109.47220 * 59.99567 * 17 16 14 19 19 H 1.09004 * 109.46987 * 60.00073 * 18 17 16 20 20 O 1.42898 * 109.47342 * 180.02562 * 18 17 16 21 21 C 1.53001 * 109.47233 * 300.00331 * 18 17 16 22 22 C 1.52995 * 109.47275 * 125.82288 * 14 2 1 23 23 H 1.09004 * 109.47113 * 84.07805 * 1 2 3 24 24 H 1.08997 * 109.46884 * 204.07375 * 1 2 3 25 25 H 1.09001 * 109.47247 * 324.07705 * 1 2 3 26 26 H 1.09008 * 109.46985 * 59.99622 * 5 3 2 27 27 H 1.08998 * 109.47209 * 299.99667 * 5 3 2 28 28 H 1.08000 * 126.28786 * 0.03030 * 7 6 5 29 29 H 1.08005 * 126.28801 * 180.25966 * 8 7 6 30 30 H 1.09009 * 109.47290 * 124.97348 * 10 9 8 31 31 H 0.96707 * 113.99416 * 59.99761 * 11 10 9 32 32 H 1.48504 * 110.00063 * 58.68233 * 12 10 9 33 33 H 1.48507 * 110.00132 * 179.97438 * 12 10 9 34 34 H 0.96991 * 125.63647 * 0.03538 * 13 6 5 35 35 H 1.09004 * 109.46981 * 180.02562 * 16 14 2 36 36 H 1.09001 * 109.47211 * 300.00590 * 16 14 2 37 37 H 1.08996 * 109.47338 * 179.97438 * 17 16 14 38 38 H 1.09007 * 109.46705 * 300.00056 * 17 16 14 39 39 H 0.96697 * 114.00287 * 180.02562 * 20 18 17 40 40 H 1.09001 * 109.46934 * 179.97438 * 21 18 17 41 41 H 1.09004 * 109.46924 * 299.99781 * 21 18 17 42 42 H 1.08999 * 109.47690 * 59.99424 * 22 14 2 43 43 H 1.09004 * 109.47189 * 179.97438 * 22 14 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1673 0.0005 5 6 1.3854 2.4723 0.0006 6 6 2.3646 3.6178 0.0011 7 6 2.9508 4.1563 1.0897 8 6 3.7899 5.1971 0.6453 9 6 3.6851 5.2546 -0.6978 10 6 4.4088 6.2208 -1.5999 11 8 3.4610 7.0827 -2.2330 12 14 5.5982 7.2400 -0.5914 13 7 2.8108 4.2883 -1.0990 14 6 2.1975 -1.2687 -0.0006 15 1 2.7437 -1.3732 0.9369 16 6 1.2097 -2.4279 -0.1473 17 6 0.4431 -2.2812 -1.4631 18 6 1.4292 -2.3002 -2.6328 19 1 1.9743 -3.2442 -2.6332 20 8 0.7133 -2.1626 -3.8618 21 6 2.4170 -1.1411 -2.4860 22 6 3.1837 -1.2878 -1.1701 23 1 -0.3633 0.1060 -1.0222 24 1 -0.3633 -0.9383 0.4192 25 1 -0.3634 0.8322 0.6029 26 1 0.7590 2.5298 0.8909 27 1 0.7584 2.5302 -0.8892 28 1 2.8045 3.8461 2.1138 29 1 4.4076 5.8294 1.2660 30 1 4.9594 5.6660 -2.3596 31 1 2.9339 7.6086 -1.6157 32 1 6.5698 6.3530 0.0975 33 1 6.3188 8.1966 -1.4696 34 1 2.5498 4.1075 -2.0154 35 1 1.7547 -3.3719 -0.1472 36 1 0.5072 -2.4143 0.6860 37 1 -0.2603 -3.1072 -1.5679 38 1 -0.1019 -1.3371 -1.4628 39 1 1.2766 -2.1668 -4.6478 40 1 3.1198 -1.1549 -3.3191 41 1 1.8720 -0.1971 -2.4857 42 1 3.8874 -0.4620 -1.0657 43 1 3.7290 -2.2316 -1.1703 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:40:55 Heat of formation + Delta-G solvation = -56.482489 kcal Electronic energy + Delta-G solvation = -24998.909977 eV Core-core repulsion = 21432.848700 eV Total energy + Delta-G solvation = -3566.061277 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.40632 -41.61041 -39.39063 -37.71640 -37.24100 -34.98694 -32.98184 -32.22056 -31.93545 -30.48078 -29.12872 -27.34794 -25.29119 -23.83303 -23.30717 -21.81667 -21.35767 -20.93356 -19.83857 -18.86368 -18.30222 -17.90920 -17.46565 -17.07960 -16.75287 -16.24075 -16.10336 -15.65123 -15.31429 -14.99094 -14.64408 -14.59126 -14.49523 -14.35145 -14.08408 -13.90087 -13.83855 -13.73401 -13.53577 -13.28191 -12.88305 -12.76337 -12.67446 -12.31058 -12.11916 -12.01275 -11.97482 -11.69251 -11.23633 -10.97511 -10.65198 -10.47088 -9.80871 -9.61627 -8.96868 -4.97540 1.10016 1.25429 1.60610 1.68760 1.82700 1.93619 2.15986 2.47107 3.19484 3.47006 3.50190 3.64916 3.69725 3.78518 3.87966 4.00959 4.04606 4.13247 4.14891 4.26552 4.31076 4.36266 4.38238 4.42205 4.45491 4.55065 4.58119 4.65170 4.78683 4.84203 4.89331 5.02111 5.03667 5.06214 5.08933 5.22829 5.25022 5.28162 5.31380 5.63377 5.99392 6.12767 6.36718 6.63522 6.69914 6.76352 7.18318 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.605 5.605 3 C 0.508 3.492 4 O -0.569 6.569 5 C -0.066 4.066 6 C 0.034 3.966 7 C -0.199 4.199 8 C -0.200 4.200 9 C -0.022 4.022 10 C -0.053 4.053 11 O -0.558 6.558 12 Si 0.811 3.189 13 N -0.538 5.538 14 C 0.148 3.852 15 H 0.066 0.934 16 C -0.116 4.116 17 C -0.134 4.134 18 C 0.105 3.895 19 H 0.057 0.943 20 O -0.586 6.586 21 C -0.135 4.135 22 C -0.137 4.137 23 H 0.069 0.931 24 H 0.097 0.903 25 H 0.091 0.909 26 H 0.142 0.858 27 H 0.119 0.881 28 H 0.141 0.859 29 H 0.154 0.846 30 H 0.099 0.901 31 H 0.397 0.603 32 H -0.295 1.295 33 H -0.292 1.292 34 H 0.416 0.584 35 H 0.088 0.912 36 H 0.097 0.903 37 H 0.073 0.927 38 H 0.094 0.906 39 H 0.391 0.609 40 H 0.058 0.942 41 H 0.054 0.946 42 H 0.064 0.936 43 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.185 -1.020 2.151 6.627 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.338 5.338 3 C 0.297 3.703 4 O -0.449 6.449 5 C -0.106 4.106 6 C -0.080 4.080 7 C -0.223 4.223 8 C -0.224 4.224 9 C -0.135 4.135 10 C -0.163 4.163 11 O -0.366 6.366 12 Si 0.716 3.284 13 N -0.133 5.133 14 C 0.045 3.955 15 H 0.084 0.916 16 C -0.153 4.153 17 C -0.171 4.171 18 C 0.046 3.954 19 H 0.075 0.925 20 O -0.394 6.394 21 C -0.173 4.173 22 C -0.175 4.175 23 H 0.087 0.913 24 H 0.116 0.884 25 H 0.109 0.891 26 H 0.159 0.841 27 H 0.137 0.863 28 H 0.159 0.841 29 H 0.172 0.828 30 H 0.116 0.884 31 H 0.248 0.752 32 H -0.223 1.223 33 H -0.219 1.219 34 H 0.254 0.746 35 H 0.106 0.894 36 H 0.116 0.884 37 H 0.092 0.908 38 H 0.112 0.888 39 H 0.240 0.760 40 H 0.077 0.923 41 H 0.073 0.927 42 H 0.083 0.917 43 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -5.048 -1.088 2.000 5.538 hybrid contribution 0.694 -0.823 -1.323 1.706 sum -4.355 -1.911 0.677 4.803 Atomic orbital electron populations 1.22440 0.77767 1.05638 1.02755 1.47958 1.08021 1.04929 1.72884 1.20939 0.87695 0.86001 0.75676 1.90688 1.15857 1.87679 1.50636 1.20280 0.95966 0.86644 1.07707 1.19908 1.03250 0.98235 0.86623 1.20830 1.02542 1.00508 0.98416 1.20910 1.05219 1.03215 0.93093 1.20983 1.00362 0.97128 0.95025 1.24933 0.97622 0.93667 1.00064 1.86443 1.54379 1.57713 1.38032 0.93064 0.76401 0.78990 0.79954 1.41893 1.35466 1.27123 1.08864 1.21031 0.93063 0.83479 0.97888 0.91600 1.21805 0.98286 0.97382 0.97870 1.22018 0.98014 1.04948 0.92130 1.21868 0.92380 0.96300 0.84840 0.92530 1.86461 1.39401 1.96749 1.16764 1.22063 0.98242 0.99391 0.97619 1.21896 0.98526 1.03000 0.94118 0.91304 0.88409 0.89084 0.84061 0.86256 0.84136 0.82843 0.88391 0.75226 1.22254 1.21931 0.74646 0.89366 0.88449 0.90803 0.88841 0.76029 0.92292 0.92749 0.91737 0.90517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.49 8.06 127.77 1.03 0.54 16 2 N -0.60 1.14 2.28 -822.59 -1.87 -0.74 16 3 C 0.51 1.59 7.20 87.66 0.63 2.22 16 4 O -0.57 -7.25 13.74 -3.02 -0.04 -7.29 16 5 C -0.07 0.18 4.87 29.10 0.14 0.32 16 6 C 0.03 0.12 5.66 41.08 0.23 0.36 16 7 C -0.20 -1.12 10.77 22.14 0.24 -0.88 16 8 C -0.20 -0.98 9.37 22.14 0.21 -0.77 16 9 C -0.02 -0.10 6.50 41.08 0.27 0.17 16 10 C -0.05 -0.13 3.08 71.23 0.22 0.09 16 11 O -0.56 -0.80 12.88 -148.98 -1.92 -2.71 16 12 Si 0.81 0.22 30.60 68.60 2.10 2.32 16 13 N -0.54 -2.02 6.08 -171.12 -1.04 -3.06 16 14 C 0.15 -0.08 3.05 44.99 0.14 0.06 16 15 H 0.07 0.12 8.14 -2.39 -0.02 0.10 16 16 C -0.12 0.65 4.91 30.59 0.15 0.80 16 17 C -0.13 0.49 5.02 30.59 0.15 0.64 16 18 C 0.10 -0.08 3.47 30.60 0.11 0.03 16 19 H 0.06 -0.08 8.14 -2.38 -0.02 -0.10 16 20 O -0.59 -0.79 13.32 -148.98 -1.98 -2.78 16 21 C -0.14 -0.15 5.39 30.59 0.16 0.01 16 22 C -0.14 -0.37 5.14 30.59 0.16 -0.21 16 23 H 0.07 -0.61 6.49 -2.38 -0.02 -0.63 16 24 H 0.10 -1.06 5.26 -2.39 -0.01 -1.07 16 25 H 0.09 -1.14 6.69 -2.39 -0.02 -1.16 16 26 H 0.14 -1.13 7.42 -2.38 -0.02 -1.15 16 27 H 0.12 -0.85 8.11 -2.39 -0.02 -0.87 16 28 H 0.14 0.49 8.06 -2.91 -0.02 0.47 16 29 H 0.15 0.15 6.24 -2.91 -0.02 0.13 16 30 H 0.10 0.40 7.96 -2.38 -0.02 0.39 16 31 H 0.40 -2.58 8.70 -74.05 -0.64 -3.22 16 32 H -0.30 -2.05 7.11 99.48 0.71 -1.34 16 33 H -0.29 -1.80 7.11 99.48 0.71 -1.09 16 34 H 0.42 0.36 8.96 -92.72 -0.83 -0.47 16 35 H 0.09 -0.55 8.14 -2.38 -0.02 -0.57 16 36 H 0.10 -0.85 6.67 -2.39 -0.02 -0.87 16 37 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 38 H 0.09 -0.40 3.95 -2.38 -0.01 -0.41 16 39 H 0.39 -1.99 9.08 -74.06 -0.67 -2.67 16 40 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 41 H 0.05 0.19 7.46 -2.38 -0.02 0.17 16 42 H 0.06 0.63 5.76 -2.39 -0.01 0.62 16 43 H 0.08 0.07 8.14 -2.38 -0.02 0.05 16 Total: 0.00 -22.83 331.24 -1.97 -24.81 By element: Atomic # 1 Polarization: -12.86 SS G_CDS: -1.05 Total: -13.91 kcal Atomic # 6 Polarization: -0.46 SS G_CDS: 3.84 Total: 3.37 kcal Atomic # 7 Polarization: -0.89 SS G_CDS: -2.91 Total: -3.80 kcal Atomic # 8 Polarization: -8.84 SS G_CDS: -3.94 Total: -12.78 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: 2.10 Total: 2.32 kcal Total: -22.83 -1.97 -24.81 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.676 kcal (2) G-P(sol) polarization free energy of solvation -22.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.807 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.482 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds