Wall clock time and date at job start Sun Mar 7 2021 05:41:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34775 * 120.00025 * 2 1 4 4 O 1.21284 * 119.99924 * 180.02562 * 3 2 1 5 5 C 1.50698 * 120.00222 * 359.97438 * 3 2 1 6 6 C 1.53540 * 109.82152 * 79.99994 * 5 3 2 7 7 C 1.53036 * 108.56788 * 180.55231 * 6 5 3 8 8 C 1.50206 * 110.31459 * 310.43304 * 7 6 5 9 9 C 1.50697 * 118.54584 * 200.02881 * 8 7 6 10 10 O 1.42894 * 109.46917 * 299.99357 * 9 8 7 11 11 Si 1.86299 * 109.47236 * 179.97438 * 9 8 7 12 12 C 1.31121 * 122.90665 * 20.30103 * 8 7 6 13 13 N 1.38922 * 121.84612 * 359.08703 * 12 8 7 14 14 C 1.46498 * 120.00066 * 180.02562 * 2 1 3 15 15 H 1.09004 * 109.47161 * 240.82802 * 14 2 1 16 16 C 1.53003 * 109.46969 * 0.82064 * 14 2 1 17 17 C 1.52993 * 109.46943 * 60.00316 * 16 14 2 18 18 C 1.52999 * 109.47118 * 60.00257 * 17 16 14 19 19 H 1.08999 * 109.47590 * 60.00159 * 18 17 16 20 20 O 1.42909 * 109.47112 * 179.97438 * 18 17 16 21 21 C 1.53003 * 109.47004 * 299.99705 * 18 17 16 22 22 C 1.52993 * 109.46943 * 60.00188 * 21 18 17 23 23 H 1.09002 * 109.46938 * 84.08512 * 1 2 3 24 24 H 1.09000 * 109.47207 * 204.08517 * 1 2 3 25 25 H 1.08999 * 109.46704 * 324.08249 * 1 2 3 26 26 H 1.09000 * 109.81249 * 319.13772 * 5 3 2 27 27 H 1.09001 * 109.62170 * 60.82645 * 6 5 3 28 28 H 1.09002 * 109.62202 * 300.27919 * 6 5 3 29 29 H 1.08989 * 109.33629 * 190.16970 * 7 6 5 30 30 H 1.09005 * 109.18820 * 70.59340 * 7 6 5 31 31 H 1.08997 * 109.47201 * 59.99750 * 9 8 7 32 32 H 0.96705 * 114.00195 * 179.97438 * 10 9 8 33 33 H 1.48501 * 109.99995 * 59.99582 * 11 9 8 34 34 H 1.48495 * 110.00148 * 181.31870 * 11 9 8 35 35 H 1.08002 * 119.07498 * 179.31744 * 12 8 7 36 36 H 0.97000 * 120.60792 * 193.56323 * 13 12 8 37 37 H 1.09002 * 109.46996 * 180.02562 * 16 14 2 38 38 H 1.08999 * 109.47283 * 300.00117 * 16 14 2 39 39 H 1.09005 * 109.47408 * 179.97438 * 17 16 14 40 40 H 1.09002 * 109.47266 * 299.99824 * 17 16 14 41 41 H 0.96702 * 113.99713 * 179.97438 * 20 18 17 42 42 H 1.08999 * 109.47283 * 180.02562 * 21 18 17 43 43 H 1.09002 * 109.46996 * 300.00198 * 21 18 17 44 44 H 1.09000 * 109.46953 * 180.02562 * 22 21 18 45 45 H 1.09002 * 109.47266 * 60.00176 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1672 -0.0005 5 6 1.3854 2.4723 -0.0006 6 6 0.9074 2.7981 1.4217 7 6 0.1356 4.1191 1.3857 8 6 0.9279 5.1663 0.6565 9 6 0.5908 6.6165 0.8893 10 8 -0.7659 6.8569 0.5103 11 14 1.7209 7.6887 -0.1325 12 6 1.8965 4.8743 -0.1777 13 7 2.2730 3.5617 -0.4333 14 6 2.1975 -1.2687 -0.0006 15 1 2.8130 -1.3333 0.8968 16 6 1.2033 -2.4316 -0.0217 17 6 0.3394 -2.3410 -1.2811 18 6 1.2345 -2.4126 -2.5199 19 1 1.7795 -3.3566 -2.5203 20 8 0.4275 -2.3286 -3.6963 21 6 2.2287 -1.2498 -2.4987 22 6 3.0926 -1.3404 -1.2393 23 1 -0.3633 0.1059 -1.0222 24 1 -0.3633 -0.9382 0.4194 25 1 -0.3633 0.8323 0.6029 26 1 0.5293 2.4044 -0.6718 27 1 1.7677 2.8948 2.0839 28 1 0.2543 2.0022 1.7796 29 1 -0.0533 4.4546 2.4053 30 1 -0.8148 3.9650 0.8746 31 1 0.7208 6.8548 1.9449 32 1 -1.0526 7.7721 0.6339 33 1 1.5537 7.3735 -1.5740 34 1 1.4197 9.1220 0.1124 35 1 2.4187 5.6769 -0.6773 36 1 3.1051 3.3670 -0.8922 37 1 1.7484 -3.3755 -0.0217 38 1 0.5657 -2.3806 0.8608 39 1 -0.3686 -3.1696 -1.2965 40 1 -0.2056 -1.3970 -1.2808 41 1 0.9300 -2.3674 -4.5216 42 1 2.8661 -1.3006 -3.3814 43 1 1.6837 -0.3058 -2.4983 44 1 3.8005 -0.5117 -1.2240 45 1 3.6376 -2.2844 -1.2397 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:41:00 Heat of formation + Delta-G solvation = -70.534649 kcal Electronic energy + Delta-G solvation = -26026.392867 eV Core-core repulsion = 22432.410765 eV Total energy + Delta-G solvation = -3593.982103 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.177 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.07618 -40.32806 -39.02942 -37.51629 -37.21213 -35.03838 -33.25874 -32.91340 -32.34655 -30.41529 -27.91276 -27.11931 -25.32789 -23.92667 -23.85342 -22.94928 -21.63673 -20.07256 -19.06009 -18.68267 -18.33011 -18.24218 -17.56760 -17.34742 -17.08177 -16.14567 -15.97751 -15.70663 -15.36021 -15.13313 -14.78810 -14.67639 -14.59921 -14.33336 -14.05780 -13.86664 -13.81942 -13.69147 -13.58379 -13.42330 -13.08721 -12.83147 -12.78817 -12.39317 -12.24660 -11.99119 -11.82052 -11.65454 -11.63897 -11.25966 -11.23347 -10.88121 -10.47352 -10.22984 -9.72242 -8.40003 -4.89095 1.31795 1.44923 1.53874 1.64582 1.73104 2.03354 2.59109 3.10108 3.22563 3.54090 3.58043 3.63762 3.73347 3.86730 3.92866 3.95622 3.99668 4.02675 4.14614 4.19238 4.22601 4.26143 4.33478 4.37518 4.44804 4.52233 4.54440 4.59463 4.66394 4.73703 4.79122 4.94358 4.95966 5.00284 5.02029 5.07330 5.10888 5.24209 5.28373 5.33033 5.50169 5.59939 6.17488 6.37315 6.61496 6.64283 6.86349 7.06309 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.603 5.603 3 C 0.515 3.485 4 O -0.527 6.527 5 C 0.136 3.864 6 C -0.129 4.129 7 C -0.051 4.051 8 C -0.233 4.233 9 C -0.049 4.049 10 O -0.540 6.540 11 Si 0.662 3.338 12 C 0.143 3.857 13 N -0.731 5.731 14 C 0.150 3.850 15 H 0.081 0.919 16 C -0.125 4.125 17 C -0.142 4.142 18 C 0.105 3.895 19 H 0.053 0.947 20 O -0.569 6.569 21 C -0.146 4.146 22 C -0.136 4.136 23 H 0.068 0.932 24 H 0.090 0.910 25 H 0.074 0.926 26 H 0.089 0.911 27 H 0.078 0.922 28 H 0.080 0.920 29 H 0.074 0.926 30 H 0.068 0.932 31 H 0.066 0.934 32 H 0.373 0.627 33 H -0.259 1.259 34 H -0.264 1.264 35 H 0.133 0.867 36 H 0.409 0.591 37 H 0.084 0.916 38 H 0.080 0.920 39 H 0.072 0.928 40 H 0.095 0.905 41 H 0.379 0.621 42 H 0.063 0.937 43 H 0.067 0.933 44 H 0.090 0.910 45 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.206 -1.908 1.490 2.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.337 5.337 3 C 0.302 3.698 4 O -0.403 6.403 5 C 0.027 3.973 6 C -0.167 4.167 7 C -0.088 4.088 8 C -0.243 4.243 9 C -0.160 4.160 10 O -0.347 6.347 11 Si 0.564 3.436 12 C 0.022 3.978 13 N -0.364 5.364 14 C 0.047 3.953 15 H 0.099 0.901 16 C -0.163 4.163 17 C -0.179 4.179 18 C 0.047 3.953 19 H 0.071 0.929 20 O -0.375 6.375 21 C -0.184 4.184 22 C -0.174 4.174 23 H 0.086 0.914 24 H 0.108 0.892 25 H 0.092 0.908 26 H 0.107 0.893 27 H 0.097 0.903 28 H 0.098 0.902 29 H 0.092 0.908 30 H 0.086 0.914 31 H 0.084 0.916 32 H 0.220 0.780 33 H -0.184 1.184 34 H -0.190 1.190 35 H 0.150 0.850 36 H 0.246 0.754 37 H 0.102 0.898 38 H 0.098 0.902 39 H 0.091 0.909 40 H 0.113 0.887 41 H 0.226 0.774 42 H 0.082 0.918 43 H 0.086 0.914 44 H 0.108 0.892 45 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -0.039 -2.010 1.203 2.342 hybrid contribution -0.416 0.389 -0.507 0.762 sum -0.456 -1.621 0.696 1.822 Atomic orbital electron populations 1.22410 0.79659 1.04307 1.02274 1.47824 1.06969 1.05526 1.73405 1.20530 0.87996 0.85103 0.76157 1.90687 1.13635 1.87056 1.48960 1.21017 0.92883 0.85359 0.98039 1.21942 1.01434 0.98882 0.94483 1.19919 0.97327 0.91325 1.00203 1.19928 1.04920 0.93977 1.05484 1.24540 0.88685 0.99031 1.03753 1.86601 1.27041 1.32601 1.88443 0.95543 0.89109 0.78269 0.80629 1.20239 0.96806 0.85984 0.94723 1.44223 1.24991 1.01833 1.65333 1.21083 0.93036 0.82203 0.98953 0.90128 1.21824 0.98052 0.98161 0.98219 1.22134 0.98442 1.05107 0.92175 1.21805 0.91134 0.96698 0.85705 0.92879 1.86504 1.37955 1.96992 1.16033 1.22185 0.98100 0.99787 0.98348 1.21925 0.98430 1.03861 0.93212 0.91413 0.89160 0.90798 0.89345 0.90330 0.90192 0.90796 0.91390 0.91564 0.77957 1.18373 1.18981 0.85023 0.75378 0.89781 0.90200 0.90892 0.88745 0.77390 0.91778 0.91417 0.89200 0.90834 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.17 7.64 59.85 0.46 0.29 16 2 N -0.60 0.52 2.25 -173.93 -0.39 0.12 16 3 C 0.52 0.61 6.65 -10.99 -0.07 0.54 16 4 O -0.53 -2.21 14.11 5.55 0.08 -2.13 16 5 C 0.14 0.03 2.48 -68.51 -0.17 -0.14 16 6 C -0.13 0.05 5.23 -26.43 -0.14 -0.09 16 7 C -0.05 -0.03 5.75 -28.10 -0.16 -0.19 16 8 C -0.23 -0.31 5.48 -101.34 -0.56 -0.87 16 9 C -0.05 -0.03 2.82 36.00 0.10 0.07 16 10 O -0.54 -1.02 12.76 -35.23 -0.45 -1.47 16 11 Si 0.66 -0.02 29.68 -169.99 -5.05 -5.06 16 12 C 0.14 0.13 9.63 -16.08 -0.15 -0.02 16 13 N -0.73 -0.70 5.47 -55.34 -0.30 -1.01 16 14 C 0.15 -0.13 2.95 -67.93 -0.20 -0.33 16 15 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 16 C -0.12 0.32 4.91 -26.73 -0.13 0.19 16 17 C -0.14 0.21 4.91 -26.74 -0.13 0.08 16 18 C 0.11 -0.06 3.47 -26.73 -0.09 -0.15 16 19 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 20 O -0.57 -0.40 13.32 -35.23 -0.47 -0.87 16 21 C -0.15 0.05 5.39 -26.73 -0.14 -0.09 16 22 C -0.14 0.02 5.23 -26.74 -0.14 -0.12 16 23 H 0.07 -0.19 6.70 -51.93 -0.35 -0.54 16 24 H 0.09 -0.36 4.95 -51.93 -0.26 -0.62 16 25 H 0.07 -0.28 5.01 -51.93 -0.26 -0.54 16 26 H 0.09 -0.03 7.36 -51.93 -0.38 -0.41 16 27 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 28 H 0.08 -0.17 6.23 -51.93 -0.32 -0.49 16 29 H 0.07 0.02 8.14 -51.94 -0.42 -0.40 16 30 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 31 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 32 H 0.37 -0.66 8.74 45.56 0.40 -0.27 16 33 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 34 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 35 H 0.13 -0.07 4.37 -52.49 -0.23 -0.30 16 36 H 0.41 0.35 8.09 -40.82 -0.33 0.02 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.08 -0.28 6.89 -51.93 -0.36 -0.64 16 39 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.09 -0.15 3.66 -51.93 -0.19 -0.34 16 41 H 0.38 -1.03 9.08 45.56 0.41 -0.62 16 42 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.07 0.07 7.60 -51.93 -0.39 -0.33 16 44 H 0.09 0.20 6.10 -51.93 -0.32 -0.11 16 45 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 LS Contribution 330.38 15.07 4.98 4.98 Total: 0.00 -7.50 330.38 -9.13 -16.63 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -5.99 Total: -10.35 kcal Atomic # 6 Polarization: 0.69 SS G_CDS: -1.53 Total: -0.84 kcal Atomic # 7 Polarization: -0.19 SS G_CDS: -0.69 Total: -0.88 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -0.84 Total: -4.47 kcal Atomic # 14 Polarization: -0.02 SS G_CDS: -5.05 Total: -5.06 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -7.50 -9.13 -16.63 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.909 kcal (2) G-P(sol) polarization free energy of solvation -7.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.128 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.626 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds