Wall clock time and date at job start Sun Mar 7 2021 05:40:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34775 * 120.00025 * 2 1 4 4 O 1.21284 * 119.99924 * 180.02562 * 3 2 1 5 5 C 1.50698 * 120.00222 * 359.97438 * 3 2 1 6 6 C 1.53540 * 109.82152 * 79.99994 * 5 3 2 7 7 C 1.53036 * 108.56788 * 180.55231 * 6 5 3 8 8 C 1.50206 * 110.31459 * 310.43304 * 7 6 5 9 9 C 1.50697 * 118.54584 * 200.02881 * 8 7 6 10 10 O 1.42894 * 109.46917 * 299.99357 * 9 8 7 11 11 Si 1.86299 * 109.47236 * 179.97438 * 9 8 7 12 12 C 1.31121 * 122.90665 * 20.30103 * 8 7 6 13 13 N 1.38922 * 121.84612 * 359.08703 * 12 8 7 14 14 C 1.46498 * 120.00066 * 180.02562 * 2 1 3 15 15 H 1.09004 * 109.47161 * 240.82802 * 14 2 1 16 16 C 1.53003 * 109.46969 * 0.82064 * 14 2 1 17 17 C 1.52993 * 109.46943 * 60.00316 * 16 14 2 18 18 C 1.52999 * 109.47118 * 60.00257 * 17 16 14 19 19 H 1.08999 * 109.47590 * 60.00159 * 18 17 16 20 20 O 1.42909 * 109.47112 * 179.97438 * 18 17 16 21 21 C 1.53003 * 109.47004 * 299.99705 * 18 17 16 22 22 C 1.52993 * 109.46943 * 60.00188 * 21 18 17 23 23 H 1.09002 * 109.46938 * 84.08512 * 1 2 3 24 24 H 1.09000 * 109.47207 * 204.08517 * 1 2 3 25 25 H 1.08999 * 109.46704 * 324.08249 * 1 2 3 26 26 H 1.09000 * 109.81249 * 319.13772 * 5 3 2 27 27 H 1.09001 * 109.62170 * 60.82645 * 6 5 3 28 28 H 1.09002 * 109.62202 * 300.27919 * 6 5 3 29 29 H 1.08989 * 109.33629 * 190.16970 * 7 6 5 30 30 H 1.09005 * 109.18820 * 70.59340 * 7 6 5 31 31 H 1.08997 * 109.47201 * 59.99750 * 9 8 7 32 32 H 0.96705 * 114.00195 * 179.97438 * 10 9 8 33 33 H 1.48501 * 109.99995 * 59.99582 * 11 9 8 34 34 H 1.48495 * 110.00148 * 181.31870 * 11 9 8 35 35 H 1.08002 * 119.07498 * 179.31744 * 12 8 7 36 36 H 0.97000 * 120.60792 * 193.56323 * 13 12 8 37 37 H 1.09002 * 109.46996 * 180.02562 * 16 14 2 38 38 H 1.08999 * 109.47283 * 300.00117 * 16 14 2 39 39 H 1.09005 * 109.47408 * 179.97438 * 17 16 14 40 40 H 1.09002 * 109.47266 * 299.99824 * 17 16 14 41 41 H 0.96702 * 113.99713 * 179.97438 * 20 18 17 42 42 H 1.08999 * 109.47283 * 180.02562 * 21 18 17 43 43 H 1.09002 * 109.46996 * 300.00198 * 21 18 17 44 44 H 1.09000 * 109.46953 * 180.02562 * 22 21 18 45 45 H 1.09002 * 109.47266 * 60.00176 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1672 -0.0005 5 6 1.3854 2.4723 -0.0006 6 6 0.9074 2.7981 1.4217 7 6 0.1356 4.1191 1.3857 8 6 0.9279 5.1663 0.6565 9 6 0.5908 6.6165 0.8893 10 8 -0.7659 6.8569 0.5103 11 14 1.7209 7.6887 -0.1325 12 6 1.8965 4.8743 -0.1777 13 7 2.2730 3.5617 -0.4333 14 6 2.1975 -1.2687 -0.0006 15 1 2.8130 -1.3333 0.8968 16 6 1.2033 -2.4316 -0.0217 17 6 0.3394 -2.3410 -1.2811 18 6 1.2345 -2.4126 -2.5199 19 1 1.7795 -3.3566 -2.5203 20 8 0.4275 -2.3286 -3.6963 21 6 2.2287 -1.2498 -2.4987 22 6 3.0926 -1.3404 -1.2393 23 1 -0.3633 0.1059 -1.0222 24 1 -0.3633 -0.9382 0.4194 25 1 -0.3633 0.8323 0.6029 26 1 0.5293 2.4044 -0.6718 27 1 1.7677 2.8948 2.0839 28 1 0.2543 2.0022 1.7796 29 1 -0.0533 4.4546 2.4053 30 1 -0.8148 3.9650 0.8746 31 1 0.7208 6.8548 1.9449 32 1 -1.0526 7.7721 0.6339 33 1 1.5537 7.3735 -1.5740 34 1 1.4197 9.1220 0.1124 35 1 2.4187 5.6769 -0.6773 36 1 3.1051 3.3670 -0.8922 37 1 1.7484 -3.3755 -0.0217 38 1 0.5657 -2.3806 0.8608 39 1 -0.3686 -3.1696 -1.2965 40 1 -0.2056 -1.3970 -1.2808 41 1 0.9300 -2.3674 -4.5216 42 1 2.8661 -1.3006 -3.3814 43 1 1.6837 -0.3058 -2.4983 44 1 3.8005 -0.5117 -1.2240 45 1 3.6376 -2.2844 -1.2397 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:40:59 Heat of formation + Delta-G solvation = -71.994622 kcal Electronic energy + Delta-G solvation = -26026.456176 eV Core-core repulsion = 22432.410765 eV Total energy + Delta-G solvation = -3594.045412 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.177 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.07096 -40.32412 -39.07845 -37.56242 -37.24339 -35.02276 -33.30600 -32.92815 -32.26928 -30.34986 -27.86812 -27.07850 -25.36805 -23.91773 -23.78334 -22.92420 -21.58375 -20.06577 -19.09558 -18.70196 -18.39721 -18.21865 -17.58472 -17.28913 -17.09077 -16.18300 -15.94898 -15.64431 -15.40118 -15.15133 -14.79220 -14.64732 -14.59452 -14.36816 -14.03315 -13.88885 -13.82944 -13.71042 -13.62817 -13.35167 -12.97028 -12.79809 -12.68384 -12.46745 -12.24458 -11.93353 -11.82082 -11.74161 -11.59893 -11.27941 -11.17686 -10.90111 -10.49165 -10.27873 -9.69214 -8.46065 -4.91943 1.26875 1.39514 1.48316 1.57860 1.76569 1.95492 2.57226 3.22289 3.25921 3.57039 3.66621 3.67967 3.74791 3.91090 4.00322 4.01544 4.03541 4.09884 4.21619 4.24835 4.31795 4.38620 4.42559 4.44511 4.55717 4.59109 4.61802 4.62778 4.71700 4.83657 4.89701 4.99597 5.02714 5.05022 5.08361 5.10682 5.20400 5.24799 5.29473 5.31648 5.53381 5.60364 6.17732 6.34797 6.69616 6.80380 6.80460 7.02362 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.597 5.597 3 C 0.513 3.487 4 O -0.564 6.564 5 C 0.137 3.863 6 C -0.121 4.121 7 C -0.049 4.049 8 C -0.248 4.248 9 C -0.056 4.056 10 O -0.561 6.561 11 Si 0.738 3.262 12 C 0.137 3.863 13 N -0.736 5.736 14 C 0.147 3.853 15 H 0.073 0.927 16 C -0.116 4.116 17 C -0.142 4.142 18 C 0.105 3.895 19 H 0.059 0.941 20 O -0.587 6.587 21 C -0.138 4.138 22 C -0.133 4.133 23 H 0.068 0.932 24 H 0.106 0.894 25 H 0.085 0.915 26 H 0.095 0.905 27 H 0.066 0.934 28 H 0.100 0.900 29 H 0.077 0.923 30 H 0.063 0.937 31 H 0.082 0.918 32 H 0.387 0.613 33 H -0.303 1.303 34 H -0.292 1.292 35 H 0.141 0.859 36 H 0.408 0.592 37 H 0.092 0.908 38 H 0.096 0.904 39 H 0.073 0.927 40 H 0.095 0.905 41 H 0.391 0.609 42 H 0.063 0.937 43 H 0.052 0.948 44 H 0.063 0.937 45 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.010 -2.649 2.193 3.584 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.329 5.329 3 C 0.300 3.700 4 O -0.443 6.443 5 C 0.028 3.972 6 C -0.160 4.160 7 C -0.087 4.087 8 C -0.258 4.258 9 C -0.167 4.167 10 O -0.369 6.369 11 Si 0.645 3.355 12 C 0.017 3.983 13 N -0.369 5.369 14 C 0.045 3.955 15 H 0.091 0.909 16 C -0.153 4.153 17 C -0.179 4.179 18 C 0.046 3.954 19 H 0.077 0.923 20 O -0.395 6.395 21 C -0.176 4.176 22 C -0.171 4.171 23 H 0.086 0.914 24 H 0.124 0.876 25 H 0.103 0.897 26 H 0.113 0.887 27 H 0.085 0.915 28 H 0.118 0.882 29 H 0.096 0.904 30 H 0.082 0.918 31 H 0.100 0.900 32 H 0.237 0.763 33 H -0.231 1.231 34 H -0.220 1.220 35 H 0.158 0.842 36 H 0.244 0.756 37 H 0.111 0.889 38 H 0.114 0.886 39 H 0.092 0.908 40 H 0.113 0.887 41 H 0.240 0.760 42 H 0.082 0.918 43 H 0.071 0.929 44 H 0.082 0.918 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.867 -2.765 1.921 3.477 hybrid contribution -0.183 0.630 -0.793 1.029 sum -1.050 -2.135 1.129 2.634 Atomic orbital electron populations 1.22597 0.78128 1.05706 1.02717 1.47873 1.07901 1.05014 1.72134 1.20711 0.87603 0.85874 0.75771 1.90671 1.15143 1.87580 1.50863 1.21074 0.92728 0.84768 0.98614 1.21894 1.01163 0.99166 0.93728 1.19916 0.97043 0.91501 1.00206 1.20161 1.05238 0.94655 1.05786 1.24689 0.88325 0.98826 1.04812 1.86557 1.27630 1.34097 1.88660 0.94686 0.88103 0.75613 0.77066 1.20409 0.96962 0.86226 0.94735 1.44320 1.25100 1.02124 1.65338 1.21122 0.93467 0.82857 0.98099 0.90927 1.21788 0.97670 0.97532 0.98331 1.22169 0.98435 1.05183 0.92122 1.21870 0.91155 0.96543 0.85832 0.92302 1.86470 1.39007 1.97015 1.17045 1.22095 0.97992 0.99310 0.98234 1.21860 0.98233 1.03210 0.93835 0.91391 0.87562 0.89687 0.88711 0.91528 0.88222 0.90435 0.91809 0.90050 0.76336 1.23124 1.21980 0.84207 0.75575 0.88930 0.88604 0.90818 0.88677 0.75995 0.91808 0.92907 0.91811 0.89916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.34 7.64 127.77 0.98 0.64 16 2 N -0.60 0.99 2.25 -822.59 -1.85 -0.86 16 3 C 0.51 1.63 6.65 87.66 0.58 2.22 16 4 O -0.56 -5.67 14.11 -3.04 -0.04 -5.72 16 5 C 0.14 0.13 2.48 44.32 0.11 0.24 16 6 C -0.12 0.12 5.23 30.79 0.16 0.28 16 7 C -0.05 -0.04 5.75 29.70 0.17 0.13 16 8 C -0.25 -0.70 5.48 -16.76 -0.09 -0.80 16 9 C -0.06 -0.07 2.82 71.24 0.20 0.13 16 10 O -0.56 -2.07 12.76 -148.98 -1.90 -3.97 16 11 Si 0.74 0.30 29.68 68.60 2.04 2.33 16 12 C 0.14 0.34 9.63 83.41 0.80 1.14 16 13 N -0.74 -2.15 5.47 -329.00 -1.80 -3.95 16 14 C 0.15 -0.25 2.95 44.99 0.13 -0.12 16 15 H 0.07 0.01 8.14 -2.38 -0.02 -0.01 16 16 C -0.12 0.73 4.91 30.59 0.15 0.88 16 17 C -0.14 0.55 4.91 30.59 0.15 0.70 16 18 C 0.10 -0.15 3.47 30.60 0.11 -0.04 16 19 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 20 O -0.59 -0.72 13.32 -148.98 -1.98 -2.71 16 21 C -0.14 0.01 5.39 30.59 0.16 0.18 16 22 C -0.13 -0.07 5.23 30.59 0.16 0.09 16 23 H 0.07 -0.42 6.70 -2.39 -0.02 -0.44 16 24 H 0.11 -1.05 4.95 -2.39 -0.01 -1.06 16 25 H 0.08 -0.76 5.01 -2.39 -0.01 -0.77 16 26 H 0.10 -0.05 7.36 -2.39 -0.02 -0.07 16 27 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 28 H 0.10 -0.53 6.23 -2.39 -0.01 -0.54 16 29 H 0.08 0.01 8.14 -2.39 -0.02 -0.01 16 30 H 0.06 0.11 8.14 -2.38 -0.02 0.10 16 31 H 0.08 -0.15 7.96 -2.39 -0.02 -0.17 16 32 H 0.39 -1.42 8.74 -74.05 -0.65 -2.06 16 33 H -0.30 -2.34 7.11 99.48 0.71 -1.64 16 34 H -0.29 -1.44 7.11 99.48 0.71 -0.73 16 35 H 0.14 -0.04 4.37 -2.91 -0.01 -0.05 16 36 H 0.41 1.33 8.09 -92.71 -0.75 0.58 16 37 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 38 H 0.10 -0.87 6.89 -2.39 -0.02 -0.89 16 39 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 40 H 0.10 -0.38 3.66 -2.39 -0.01 -0.39 16 41 H 0.39 -2.10 9.08 -74.06 -0.67 -2.78 16 42 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 43 H 0.05 0.16 7.60 -2.39 -0.02 0.14 16 44 H 0.06 0.41 6.10 -2.39 -0.01 0.40 16 45 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 Total: 0.00 -18.09 330.38 -2.76 -20.84 By element: Atomic # 1 Polarization: -10.64 SS G_CDS: -0.99 Total: -11.63 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: 3.78 Total: 5.66 kcal Atomic # 7 Polarization: -1.16 SS G_CDS: -3.65 Total: -4.81 kcal Atomic # 8 Polarization: -8.47 SS G_CDS: -3.93 Total: -12.40 kcal Atomic # 14 Polarization: 0.30 SS G_CDS: 2.04 Total: 2.33 kcal Total: -18.09 -2.76 -20.84 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.150 kcal (2) G-P(sol) polarization free energy of solvation -18.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.237 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.758 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds