Wall clock time and date at job start Sun Mar 7 2021 05:41:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34782 * 120.00189 * 2 1 4 4 O 1.21282 * 120.00501 * 183.56858 * 3 2 1 5 5 C 1.50702 * 119.99419 * 3.29534 * 3 2 1 6 6 C 1.53043 * 109.32571 * 215.05549 * 5 3 2 7 7 C 1.53542 * 108.56927 * 190.18840 * 6 5 3 8 8 N 1.47026 * 107.64951 * 60.95090 * 7 6 5 9 9 C 1.38920 * 118.88653 * 316.31611 * 8 7 6 10 10 C 1.31109 * 121.84869 * 13.33960 * 9 8 7 11 11 C 1.50702 * 118.55112 * 179.57306 * 10 9 8 12 12 O 1.42893 * 109.47077 * 255.44461 * 11 10 9 13 13 Si 1.86302 * 109.46795 * 15.44387 * 11 10 9 14 14 C 1.46499 * 120.00113 * 180.02562 * 2 1 3 15 15 H 1.09010 * 109.47049 * 246.71546 * 14 2 1 16 16 C 1.52989 * 109.47204 * 6.71593 * 14 2 1 17 17 C 1.53003 * 109.47157 * 60.00059 * 16 14 2 18 18 C 1.52991 * 109.46815 * 60.00252 * 17 16 14 19 19 H 1.09007 * 109.47537 * 59.99828 * 18 17 16 20 20 O 1.42907 * 109.47095 * 179.97438 * 18 17 16 21 21 C 1.52997 * 109.47476 * 299.99802 * 18 17 16 22 22 C 1.53003 * 109.46937 * 60.00273 * 21 18 17 23 23 H 1.09006 * 109.46815 * 83.93817 * 1 2 3 24 24 H 1.08997 * 109.47024 * 203.93810 * 1 2 3 25 25 H 1.08997 * 109.47282 * 323.94339 * 1 2 3 26 26 H 1.08992 * 109.33369 * 334.54315 * 5 3 2 27 27 H 1.08995 * 109.62305 * 309.89225 * 6 5 3 28 28 H 1.08995 * 109.61837 * 70.45277 * 6 5 3 29 29 H 1.09004 * 109.83649 * 301.40145 * 7 6 5 30 30 H 1.09002 * 109.81024 * 180.48269 * 7 6 5 31 31 H 0.97009 * 120.55295 * 136.34203 * 8 7 6 32 32 H 1.08002 * 119.07775 * 193.31711 * 9 8 7 33 33 H 1.08999 * 109.47297 * 135.43587 * 11 10 9 34 34 H 0.96707 * 114.00159 * 59.99584 * 12 11 10 35 35 H 1.48498 * 110.00231 * 58.68140 * 13 11 10 36 36 H 1.48497 * 110.00191 * 180.02562 * 13 11 10 37 37 H 1.09004 * 109.47478 * 180.02562 * 16 14 2 38 38 H 1.09001 * 109.47232 * 300.00236 * 16 14 2 39 39 H 1.09007 * 109.47066 * 179.97438 * 17 16 14 40 40 H 1.08994 * 109.47223 * 300.00163 * 17 16 14 41 41 H 0.96701 * 113.99584 * 180.02562 * 20 18 17 42 42 H 1.09001 * 109.47655 * 180.02562 * 21 18 17 43 43 H 1.09002 * 109.47224 * 300.00488 * 21 18 17 44 44 H 1.08999 * 109.47374 * 180.02562 * 22 21 18 45 45 H 1.08996 * 109.47637 * 59.99905 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1390 1.1672 0.0000 4 8 3.3500 1.1683 -0.0654 5 6 1.3872 2.4712 0.0750 6 6 2.1162 3.5250 -0.7619 7 6 1.4910 4.8972 -0.4728 8 7 1.6736 5.1776 0.9589 9 6 1.4319 4.1637 1.8774 10 6 1.2994 2.9127 1.5081 11 6 1.0483 1.8715 2.5682 12 8 2.2461 1.1267 2.7975 13 14 0.5251 2.7080 4.1485 14 6 2.1975 -1.2687 -0.0006 15 1 2.7310 -1.3807 0.9434 16 6 1.2120 -2.4265 -0.1698 17 6 0.4631 -2.2694 -1.4947 18 6 1.4650 -2.2794 -2.6509 19 1 2.0101 -3.2234 -2.6513 20 8 0.7656 -2.1333 -3.8886 21 6 2.4507 -1.1216 -2.4818 22 6 3.1995 -1.2787 -1.1569 23 1 -0.3633 0.1085 -1.0220 24 1 -0.3633 -0.9392 0.4170 25 1 -0.3634 0.8308 0.6048 26 1 0.3817 2.3314 -0.3217 27 1 3.1722 3.5401 -0.4923 28 1 2.0092 3.2896 -1.8207 29 1 0.4280 4.8774 -0.7131 30 1 1.9905 5.6631 -1.0661 31 1 1.9576 6.0559 1.2571 32 1 1.3512 4.4130 2.9252 33 1 0.2591 1.1972 2.2356 34 1 2.9924 1.6642 3.0964 35 1 -0.7018 3.5116 3.9158 36 1 0.2750 1.6920 5.2023 37 1 1.7569 -3.3706 -0.1697 38 1 0.4982 -2.4195 0.6540 39 1 -0.2388 -3.0947 -1.6155 40 1 -0.0818 -1.3255 -1.4944 41 1 1.3396 -2.1315 -4.6668 42 1 3.1642 -1.1284 -3.3058 43 1 1.9057 -0.1776 -2.4814 44 1 3.9014 -0.4536 -1.0361 45 1 3.7445 -2.2226 -1.1571 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:41:03 Heat of formation + Delta-G solvation = -72.080195 kcal Electronic energy + Delta-G solvation = -27155.207608 eV Core-core repulsion = 23561.158485 eV Total energy + Delta-G solvation = -3594.049123 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.177 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.88708 -40.27529 -38.68178 -37.42479 -37.01906 -34.83369 -33.20176 -32.73623 -32.07305 -30.18820 -27.65080 -26.86700 -25.94646 -23.69723 -23.29583 -23.01258 -21.39719 -19.77442 -19.25730 -18.68757 -18.18297 -17.81814 -17.32590 -17.07614 -16.77312 -16.26345 -15.81768 -15.49212 -15.31304 -15.23026 -14.92899 -14.49914 -14.39156 -14.25086 -13.95901 -13.86782 -13.73698 -13.51206 -13.28877 -13.10768 -12.91903 -12.68956 -12.57549 -12.15685 -12.07773 -11.90523 -11.82747 -11.74869 -11.57002 -11.36060 -11.11568 -10.73276 -10.14831 -10.04451 -9.34205 -8.49795 -5.02178 1.26599 1.37625 1.64780 2.00560 2.05442 2.20639 2.52705 3.23116 3.53907 3.63263 3.74068 3.77043 3.78537 3.94219 4.06478 4.14046 4.16308 4.19990 4.31497 4.32416 4.35908 4.41393 4.42686 4.48264 4.51955 4.55167 4.63334 4.68446 4.69696 4.73766 4.83151 4.91652 5.09883 5.17027 5.19085 5.23052 5.24581 5.28616 5.34212 5.42532 5.51229 5.85917 6.24513 6.65550 6.73512 6.75928 6.81057 7.54846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.602 5.602 3 C 0.544 3.456 4 O -0.533 6.533 5 C -0.041 4.041 6 C -0.125 4.125 7 C 0.122 3.878 8 N -0.748 5.748 9 C 0.157 3.843 10 C -0.276 4.276 11 C -0.048 4.048 12 O -0.537 6.537 13 Si 0.666 3.334 14 C 0.155 3.845 15 H 0.078 0.922 16 C -0.126 4.126 17 C -0.133 4.133 18 C 0.105 3.895 19 H 0.052 0.948 20 O -0.570 6.570 21 C -0.143 4.143 22 C -0.141 4.141 23 H 0.061 0.939 24 H 0.081 0.919 25 H 0.067 0.933 26 H 0.083 0.917 27 H 0.086 0.914 28 H 0.074 0.926 29 H 0.060 0.940 30 H 0.082 0.918 31 H 0.404 0.596 32 H 0.133 0.867 33 H 0.104 0.896 34 H 0.375 0.625 35 H -0.259 1.259 36 H -0.257 1.257 37 H 0.080 0.920 38 H 0.077 0.923 39 H 0.069 0.931 40 H 0.088 0.912 41 H 0.378 0.622 42 H 0.061 0.939 43 H 0.066 0.934 44 H 0.101 0.899 45 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.748 3.175 0.373 3.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.336 5.336 3 C 0.333 3.667 4 O -0.409 6.409 5 C -0.062 4.062 6 C -0.164 4.164 7 C -0.003 4.003 8 N -0.379 5.379 9 C 0.036 3.964 10 C -0.287 4.287 11 C -0.161 4.161 12 O -0.342 6.342 13 Si 0.569 3.431 14 C 0.053 3.947 15 H 0.096 0.904 16 C -0.164 4.164 17 C -0.170 4.170 18 C 0.046 3.954 19 H 0.070 0.930 20 O -0.376 6.376 21 C -0.181 4.181 22 C -0.179 4.179 23 H 0.080 0.920 24 H 0.100 0.900 25 H 0.086 0.914 26 H 0.101 0.899 27 H 0.105 0.895 28 H 0.093 0.907 29 H 0.078 0.922 30 H 0.101 0.899 31 H 0.238 0.762 32 H 0.150 0.850 33 H 0.121 0.879 34 H 0.222 0.778 35 H -0.184 1.184 36 H -0.182 1.182 37 H 0.098 0.902 38 H 0.095 0.905 39 H 0.088 0.912 40 H 0.107 0.893 41 H 0.225 0.775 42 H 0.079 0.921 43 H 0.085 0.915 44 H 0.119 0.881 45 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -1.674 2.729 1.032 3.364 hybrid contribution 0.214 -0.064 -0.755 0.788 sum -1.460 2.665 0.276 3.051 Atomic orbital electron populations 1.22186 0.80772 1.03470 1.01453 1.47675 1.06122 1.05675 1.74114 1.20104 0.87647 0.84387 0.74575 1.90571 1.14063 1.86874 1.49408 1.19714 0.99369 0.93040 0.94093 1.21800 1.01480 0.93735 0.99372 1.21600 1.00125 0.96970 0.81583 1.44552 1.75499 1.12963 1.04842 1.20292 0.94937 0.88139 0.93069 1.20509 1.19518 0.93635 0.95002 1.24799 0.91237 0.96666 1.03354 1.86503 1.20958 1.37119 1.89609 0.95239 0.86178 0.83079 0.78632 1.20967 0.92380 0.82365 0.99012 0.90367 1.21847 0.98730 0.98406 0.97369 1.21954 0.98136 1.04418 0.92485 1.21823 0.92485 0.96709 0.84335 0.93013 1.86496 1.38454 1.96703 1.15951 1.22143 0.98326 0.99512 0.98092 1.22035 0.98754 1.03971 0.93108 0.92044 0.90021 0.91419 0.89909 0.89532 0.90747 0.92189 0.89912 0.76196 0.85020 0.87909 0.77812 1.18435 1.18224 0.90190 0.90500 0.91241 0.89340 0.77519 0.92067 0.91526 0.88095 0.91501 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.05 7.20 59.85 0.43 0.38 16 2 N -0.60 -0.69 2.27 -173.93 -0.40 -1.08 16 3 C 0.54 1.45 4.20 -10.98 -0.05 1.40 16 4 O -0.53 -3.06 13.58 5.56 0.08 -2.99 16 5 C -0.04 -0.03 1.98 -93.14 -0.18 -0.22 16 6 C -0.13 -0.03 5.30 -26.43 -0.14 -0.17 16 7 C 0.12 -0.22 7.16 -3.47 -0.02 -0.24 16 8 N -0.75 1.46 5.83 -60.68 -0.35 1.10 16 9 C 0.16 -0.20 9.61 -16.08 -0.15 -0.35 16 10 C -0.28 -0.02 5.01 -101.33 -0.51 -0.53 16 11 C -0.05 -0.01 2.19 36.01 0.08 0.07 16 12 O -0.54 -0.78 11.52 -35.23 -0.41 -1.18 16 13 Si 0.67 -0.51 29.79 -169.99 -5.06 -5.57 16 14 C 0.16 0.21 3.09 -67.93 -0.21 0.00 16 15 H 0.08 0.22 8.14 -51.92 -0.42 -0.21 16 16 C -0.13 0.06 4.90 -26.74 -0.13 -0.08 16 17 C -0.13 -0.04 5.04 -26.73 -0.13 -0.17 16 18 C 0.11 0.10 3.47 -26.74 -0.09 0.00 16 19 H 0.05 0.03 8.14 -51.93 -0.42 -0.39 16 20 O -0.57 -1.04 13.32 -35.23 -0.47 -1.51 16 21 C -0.14 -0.18 5.39 -26.73 -0.14 -0.33 16 22 C -0.14 -0.26 5.12 -26.73 -0.14 -0.40 16 23 H 0.06 -0.07 6.47 -51.93 -0.34 -0.40 16 24 H 0.08 -0.13 5.30 -51.93 -0.28 -0.41 16 25 H 0.07 -0.08 4.59 -51.93 -0.24 -0.32 16 26 H 0.08 0.00 6.34 -51.93 -0.33 -0.33 16 27 H 0.09 0.21 7.50 -51.93 -0.39 -0.18 16 28 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 29 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.40 -1.57 8.96 -40.82 -0.37 -1.93 16 32 H 0.13 -0.44 4.64 -52.49 -0.24 -0.69 16 33 H 0.10 0.06 5.42 -51.93 -0.28 -0.22 16 34 H 0.37 -0.39 8.70 45.56 0.40 0.00 16 35 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 36 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.08 -0.08 6.64 -51.93 -0.34 -0.43 16 39 H 0.07 0.04 8.14 -51.92 -0.42 -0.39 16 40 H 0.09 0.03 4.00 -51.93 -0.21 -0.18 16 41 H 0.38 -0.66 9.08 45.56 0.41 -0.24 16 42 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 43 H 0.07 0.18 7.42 -51.93 -0.39 -0.21 16 44 H 0.10 0.44 5.61 -51.93 -0.29 0.15 16 45 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 LS Contribution 324.14 15.07 4.88 4.88 Total: 0.00 -7.52 324.14 -9.01 -16.53 By element: Atomic # 1 Polarization: -3.69 SS G_CDS: -5.88 Total: -9.57 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -1.40 Total: -0.62 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -0.75 Total: 0.02 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -0.80 Total: -5.68 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.06 Total: -5.57 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -7.52 -9.01 -16.53 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.550 kcal (2) G-P(sol) polarization free energy of solvation -7.525 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.074 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.006 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.531 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds