Wall clock time and date at job start Sun Mar 7 2021 05:41:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34772 * 120.00034 * 2 1 4 4 O 1.21273 * 120.00413 * 179.97438 * 3 2 1 5 5 C 1.50707 * 119.99928 * 0.02562 * 3 2 1 6 6 F 1.39902 * 109.46750 * 299.99738 * 5 3 2 7 7 F 1.39901 * 109.47368 * 59.99421 * 5 3 2 8 8 O 1.42897 * 109.47308 * 179.97438 * 5 3 2 9 9 C 1.35894 * 117.00067 * 179.97438 * 8 5 3 10 10 C 1.38735 * 120.05978 * 359.72774 * 9 8 5 11 11 C 1.38137 * 119.94382 * 179.69684 * 10 9 8 12 12 C 1.38267 * 120.06088 * 0.59473 * 11 10 9 13 13 C 1.50696 * 119.95003 * 179.69959 * 12 11 10 14 14 O 1.42894 * 109.47424 * 119.97704 * 13 12 11 15 15 Si 1.86303 * 109.46887 * 359.97438 * 13 12 11 16 16 C 1.38274 * 120.10553 * 359.68011 * 12 11 10 17 17 C 1.38139 * 120.05558 * 0.02562 * 16 12 11 18 18 C 1.46504 * 119.99899 * 180.02562 * 2 1 3 19 19 H 1.08993 * 109.47146 * 114.17950 * 18 2 1 20 20 C 1.53007 * 109.46804 * 234.17729 * 18 2 1 21 21 C 1.52999 * 109.47131 * 59.99910 * 20 18 2 22 22 C 1.53002 * 109.47136 * 59.99832 * 21 20 18 23 23 H 1.08997 * 109.46694 * 59.99814 * 22 21 20 24 24 O 1.42895 * 109.46997 * 179.97438 * 22 21 20 25 25 C 1.52998 * 109.47328 * 299.99946 * 22 21 20 26 26 C 1.52999 * 109.46968 * 59.99952 * 25 22 21 27 27 H 1.09000 * 109.47020 * 275.94176 * 1 2 3 28 28 H 1.08996 * 109.47145 * 35.94816 * 1 2 3 29 29 H 1.08997 * 109.46881 * 155.94662 * 1 2 3 30 30 H 1.08002 * 120.01970 * 359.97438 * 10 9 8 31 31 H 1.08003 * 119.96793 * 180.31499 * 11 10 9 32 32 H 1.09005 * 109.47332 * 239.98392 * 13 12 11 33 33 H 0.96705 * 113.99841 * 300.00808 * 14 13 12 34 34 H 1.48499 * 109.99977 * 58.67833 * 15 13 12 35 35 H 1.48494 * 110.00132 * 180.02562 * 15 13 12 36 36 H 1.08003 * 119.96627 * 179.97438 * 16 12 11 37 37 H 1.08006 * 120.02751 * 180.02562 * 17 16 12 38 38 H 1.08993 * 109.46894 * 179.97438 * 20 18 2 39 39 H 1.09001 * 109.47075 * 300.00004 * 20 18 2 40 40 H 1.08999 * 109.47256 * 180.02562 * 21 20 18 41 41 H 1.09006 * 109.47350 * 299.99879 * 21 20 18 42 42 H 0.96700 * 113.99807 * 180.02562 * 24 22 21 43 43 H 1.09001 * 109.47155 * 179.97438 * 25 22 21 44 44 H 1.08993 * 109.47462 * 300.00268 * 25 22 21 45 45 H 1.08999 * 109.47256 * 179.97438 * 26 25 22 46 46 H 1.08997 * 109.47481 * 59.99870 * 26 25 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3516 1.1672 0.0005 5 6 1.3854 2.4723 0.0006 6 9 0.5807 2.5466 -1.1414 7 9 0.5814 2.5462 1.1431 8 8 2.3139 3.5585 0.0011 9 6 1.7945 4.8142 0.0011 10 6 0.4193 4.9974 -0.0051 11 6 -0.1062 6.2749 0.0013 12 6 0.7370 7.3707 0.0014 13 6 0.1611 8.7632 0.0015 14 8 0.6011 9.4606 1.1685 15 14 -1.6994 8.6657 0.0007 16 6 2.1080 7.1908 0.0018 17 6 2.6385 5.9153 0.0015 18 6 2.1975 -1.2688 -0.0006 19 1 2.7437 -1.3726 -0.9381 20 6 3.1837 -1.2888 1.1691 21 6 2.4170 -1.1430 2.4851 22 6 1.4292 -2.3023 2.6310 23 1 1.9742 -3.2462 2.6306 24 8 0.7136 -2.1665 3.8604 25 6 0.4431 -2.2823 1.4614 26 6 1.2097 -2.4280 0.1454 27 1 -0.3633 0.1064 1.0221 28 1 -0.3633 0.8319 -0.6033 29 1 -0.3633 -0.9384 -0.4189 30 1 -0.2398 4.1418 -0.0103 31 1 -1.1767 6.4179 0.0017 32 1 0.4973 9.2956 -0.8883 33 1 0.3370 9.0425 1.9995 34 1 -2.1691 7.9144 1.1924 35 1 -2.2796 10.0326 0.0002 36 1 2.7646 8.0483 0.0014 37 1 3.7094 5.7753 0.0022 38 1 3.7283 -2.2329 1.1690 39 1 3.8874 -0.4629 1.0652 40 1 3.1196 -1.1568 3.3184 41 1 1.8720 -0.1990 2.4855 42 1 0.0684 -2.8689 4.0195 43 1 -0.2604 -3.1084 1.5651 44 1 -0.1019 -1.3384 1.4617 45 1 0.5072 -2.4142 -0.6879 46 1 1.7547 -3.3719 0.1450 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:41:57 Heat of formation + Delta-G solvation = -190.227540 kcal Electronic energy + Delta-G solvation = -34210.448446 eV Core-core repulsion = 29318.197176 eV Total energy + Delta-G solvation = -4892.251270 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.147 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -50.99801 -48.90926 -42.03770 -41.39130 -39.82857 -39.21902 -37.51774 -37.30907 -35.11757 -32.48330 -32.27340 -32.06539 -30.72234 -29.01394 -27.50027 -26.29095 -24.67286 -23.97406 -23.35167 -22.69401 -21.99895 -20.91227 -20.16973 -19.74080 -19.28433 -18.59216 -18.20888 -17.76847 -17.43711 -17.35045 -16.93447 -16.60480 -16.30921 -16.12637 -15.94138 -15.77948 -15.61876 -15.44391 -15.30069 -15.15501 -15.04234 -14.96645 -14.56779 -14.43019 -14.38789 -14.27660 -13.90366 -13.76864 -13.57616 -13.38531 -13.06086 -13.00286 -12.79558 -12.43651 -12.30873 -12.27104 -12.07212 -11.83659 -11.75058 -11.56486 -10.88877 -10.78135 -10.66473 -10.21236 -10.02246 -9.62081 -4.93882 -0.01153 0.13004 0.44855 0.62073 1.28809 1.58750 1.66706 1.86918 1.94480 2.42737 2.49132 3.19657 3.22094 3.37358 3.49570 3.53246 3.62255 3.63344 3.69239 3.86752 3.99832 4.05591 4.08427 4.11043 4.17953 4.24994 4.31010 4.37480 4.38241 4.41514 4.52281 4.57610 4.65196 4.80395 4.87300 4.87654 4.93639 4.94608 5.01873 5.05001 5.07264 5.13517 5.23137 5.31329 5.35956 5.41326 5.71236 5.81246 6.32091 6.46192 6.88244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.572 5.572 3 C 0.507 3.493 4 O -0.504 6.504 5 C 0.435 3.565 6 F -0.168 7.168 7 F -0.174 7.174 8 O -0.306 6.306 9 C 0.084 3.916 10 C -0.193 4.193 11 C -0.076 4.076 12 C -0.139 4.139 13 C -0.078 4.078 14 O -0.547 6.547 15 Si 0.762 3.238 16 C -0.057 4.057 17 C -0.137 4.137 18 C 0.144 3.856 19 H 0.091 0.909 20 C -0.139 4.139 21 C -0.110 4.110 22 C 0.105 3.895 23 H 0.066 0.934 24 O -0.592 6.592 25 C -0.173 4.173 26 C -0.118 4.118 27 H 0.080 0.920 28 H 0.080 0.920 29 H 0.126 0.874 30 H 0.141 0.859 31 H 0.155 0.845 32 H 0.131 0.869 33 H 0.386 0.614 34 H -0.282 1.282 35 H -0.300 1.300 36 H 0.151 0.849 37 H 0.144 0.856 38 H 0.098 0.902 39 H 0.070 0.930 40 H 0.055 0.945 41 H 0.044 0.956 42 H 0.394 0.606 43 H 0.091 0.909 44 H 0.086 0.914 45 H 0.099 0.901 46 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.519 -6.279 -3.311 8.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 N -0.305 5.305 3 C 0.287 3.713 4 O -0.378 6.378 5 C 0.358 3.642 6 F -0.150 7.150 7 F -0.155 7.155 8 O -0.223 6.223 9 C 0.042 3.958 10 C -0.212 4.212 11 C -0.094 4.094 12 C -0.139 4.139 13 C -0.187 4.187 14 O -0.355 6.355 15 Si 0.667 3.333 16 C -0.075 4.075 17 C -0.155 4.155 18 C 0.043 3.957 19 H 0.109 0.891 20 C -0.177 4.177 21 C -0.148 4.148 22 C 0.047 3.953 23 H 0.084 0.916 24 O -0.400 6.400 25 C -0.210 4.210 26 C -0.155 4.155 27 H 0.098 0.902 28 H 0.098 0.902 29 H 0.144 0.856 30 H 0.158 0.842 31 H 0.172 0.828 32 H 0.149 0.851 33 H 0.236 0.764 34 H -0.209 1.209 35 H -0.228 1.228 36 H 0.168 0.832 37 H 0.161 0.839 38 H 0.116 0.884 39 H 0.089 0.911 40 H 0.074 0.926 41 H 0.063 0.937 42 H 0.244 0.756 43 H 0.110 0.890 44 H 0.104 0.896 45 H 0.118 0.882 46 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -4.831 -5.262 -3.291 7.865 hybrid contribution 0.074 -0.139 1.305 1.314 sum -4.757 -5.401 -1.986 7.466 Atomic orbital electron populations 1.22871 0.76914 1.07080 1.03775 1.47918 1.08797 1.04267 1.69519 1.19489 0.87627 0.83896 0.80257 1.90781 1.13310 1.85603 1.48139 1.21818 0.78569 0.90051 0.73795 1.93134 1.74413 1.96396 1.51018 1.93180 1.74623 1.96572 1.51128 1.86646 1.34033 1.13028 1.88609 1.19282 0.93509 0.82749 1.00306 1.21595 0.92828 1.00141 1.06620 1.21025 1.00512 0.90791 0.97032 1.20436 0.94221 0.95904 1.03346 1.25188 1.11698 0.90383 0.91385 1.86576 1.78796 1.53484 1.16609 0.94146 0.72346 0.79080 0.87695 1.21059 0.95049 0.96035 0.95372 1.20705 1.00572 0.89932 1.04324 1.21505 0.93536 0.81219 0.99441 0.89065 1.21975 0.98313 1.04448 0.92922 1.21382 0.97712 0.98129 0.97569 1.21832 0.92254 0.97611 0.83647 0.91628 1.86504 1.58011 1.55019 1.40496 1.22790 0.98920 1.05141 0.94113 1.21867 0.98190 0.97040 0.98387 0.90215 0.90185 0.85605 0.84165 0.82784 0.85117 0.76440 1.20891 1.22840 0.83155 0.83865 0.88393 0.91144 0.92611 0.93728 0.75563 0.89033 0.89597 0.88227 0.87789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.21 7.42 127.77 0.95 0.73 16 2 N -0.57 0.31 2.28 -822.59 -1.87 -1.57 16 3 C 0.51 3.33 6.77 87.66 0.59 3.92 16 4 O -0.50 -6.45 14.21 16.03 0.23 -6.22 16 5 C 0.44 2.65 1.45 71.24 0.10 2.75 16 6 F -0.17 -0.54 13.21 44.97 0.59 0.05 16 7 F -0.17 -0.86 14.39 44.97 0.65 -0.22 16 8 O -0.31 -3.12 9.60 -73.31 -0.70 -3.83 16 9 C 0.08 0.62 6.48 22.51 0.15 0.76 16 10 C -0.19 -0.75 8.26 22.36 0.18 -0.57 16 11 C -0.08 -0.03 8.66 22.25 0.19 0.16 16 12 C -0.14 -0.08 5.39 -19.85 -0.11 -0.19 16 13 C -0.08 0.09 2.82 71.23 0.20 0.29 16 14 O -0.55 -1.11 12.77 -148.98 -1.90 -3.01 16 15 Si 0.76 -1.80 29.78 68.60 2.04 0.25 16 16 C -0.06 -0.11 9.60 22.25 0.21 0.10 16 17 C -0.14 -0.67 9.99 22.37 0.22 -0.45 16 18 C 0.14 -0.45 3.05 44.99 0.14 -0.31 16 19 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 20 C -0.14 -0.07 5.14 30.60 0.16 0.09 16 21 C -0.11 -0.28 5.42 30.59 0.17 -0.12 16 22 C 0.10 -0.25 3.47 30.59 0.11 -0.15 16 23 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 24 O -0.59 -0.44 13.32 -148.98 -1.98 -2.43 16 25 C -0.17 1.36 4.99 30.59 0.15 1.51 16 26 C -0.12 1.13 4.90 30.59 0.15 1.28 16 27 H 0.08 -0.48 6.44 -2.39 -0.02 -0.49 16 28 H 0.08 -0.47 5.58 -2.39 -0.01 -0.49 16 29 H 0.13 -1.48 5.25 -2.39 -0.01 -1.49 16 30 H 0.14 0.29 5.10 -2.91 -0.01 0.28 16 31 H 0.16 -0.68 4.87 -2.91 -0.01 -0.69 16 32 H 0.13 -0.42 7.96 -2.38 -0.02 -0.44 16 33 H 0.39 -1.21 8.70 -74.05 -0.64 -1.85 16 34 H -0.28 -0.43 7.11 99.48 0.71 0.28 16 35 H -0.30 -1.60 7.11 99.48 0.71 -0.89 16 36 H 0.15 -0.10 8.06 -2.91 -0.02 -0.13 16 37 H 0.14 0.47 8.06 -2.91 -0.02 0.45 16 38 H 0.10 -0.32 8.14 -2.39 -0.02 -0.34 16 39 H 0.07 0.48 5.76 -2.39 -0.01 0.47 16 40 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 41 H 0.04 0.29 7.46 -2.38 -0.02 0.27 16 42 H 0.39 -3.13 9.08 -74.06 -0.67 -3.80 16 43 H 0.09 -1.02 8.14 -2.39 -0.02 -1.04 16 44 H 0.09 -0.57 3.95 -2.39 -0.01 -0.58 16 45 H 0.10 -1.28 6.68 -2.39 -0.02 -1.30 16 46 H 0.10 -1.22 8.14 -2.39 -0.02 -1.24 16 Total: 0.00 -20.93 359.39 0.40 -20.52 By element: Atomic # 1 Polarization: -13.16 SS G_CDS: -0.21 Total: -13.37 kcal Atomic # 6 Polarization: 6.25 SS G_CDS: 3.57 Total: 9.82 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -1.87 Total: -1.57 kcal Atomic # 8 Polarization: -11.12 SS G_CDS: -4.36 Total: -15.48 kcal Atomic # 9 Polarization: -1.40 SS G_CDS: 1.24 Total: -0.16 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: 2.04 Total: 0.25 kcal Total: -20.93 0.40 -20.52 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.705 kcal (2) G-P(sol) polarization free energy of solvation -20.927 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -190.631 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.228 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds