Wall clock time and date at job start Sun Mar 7 2021 05:42:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37933 * 120.07659 * 2 1 4 4 C 1.38379 * 120.14695 * 179.78953 * 3 2 1 5 5 C 1.50701 * 119.85331 * 180.23389 * 4 3 2 6 6 C 1.38339 * 120.29106 * 0.46437 * 4 3 2 7 7 C 1.50700 * 119.92478 * 179.76527 * 6 4 3 8 8 O 1.42903 * 109.46967 * 75.02900 * 7 6 4 9 9 Si 1.86303 * 109.46964 * 195.02361 * 7 6 4 10 10 C 1.37972 * 120.14499 * 359.79342 * 6 4 3 11 11 C 1.39553 * 119.85472 * 359.97194 * 10 6 4 12 12 C 1.47844 * 120.14806 * 179.97438 * 11 10 6 13 13 O 1.21552 * 120.00513 * 130.10482 * 12 11 10 14 14 N 1.34779 * 119.99627 * 310.10617 * 12 11 10 15 15 C 1.46500 * 120.00498 * 4.63019 * 14 12 11 16 16 C 1.46503 * 119.99928 * 184.62587 * 14 12 11 17 17 H 1.09003 * 109.47347 * 359.97438 * 16 14 12 18 18 C 1.53002 * 109.47253 * 120.00265 * 16 14 12 19 19 C 1.52996 * 109.46977 * 180.02562 * 18 16 14 20 20 C 1.52998 * 109.47343 * 299.99711 * 19 18 16 21 21 H 1.09007 * 109.46989 * 180.02562 * 20 19 18 22 22 O 1.42902 * 109.47304 * 300.00241 * 20 19 18 23 23 C 1.53002 * 109.46848 * 60.00210 * 20 19 18 24 24 C 1.52997 * 109.47272 * 299.99772 * 23 20 19 25 25 H 1.08999 * 109.47219 * 264.31453 * 1 2 3 26 26 H 1.09000 * 109.46495 * 24.31410 * 1 2 3 27 27 H 1.09000 * 109.46729 * 144.31534 * 1 2 3 28 28 H 1.08000 * 119.92712 * 0.02562 * 3 2 1 29 29 H 1.08997 * 109.47169 * 270.22888 * 5 4 3 30 30 H 1.08999 * 109.47219 * 30.23339 * 5 4 3 31 31 H 1.09002 * 109.47165 * 150.22908 * 5 4 3 32 32 H 1.08995 * 109.47630 * 315.02500 * 7 6 4 33 33 H 0.96695 * 114.00570 * 59.99767 * 8 7 6 34 34 H 1.48503 * 110.00042 * 180.02562 * 9 7 6 35 35 H 1.48498 * 110.00028 * 301.32216 * 9 7 6 36 36 H 1.08000 * 120.07653 * 179.97438 * 10 6 4 37 37 H 1.09001 * 109.47390 * 84.87813 * 15 14 12 38 38 H 1.08998 * 109.47359 * 204.88152 * 15 14 12 39 39 H 1.08999 * 109.46502 * 324.88053 * 15 14 12 40 40 H 1.08994 * 109.46817 * 300.00361 * 18 16 14 41 41 H 1.08995 * 109.46840 * 59.99895 * 18 16 14 42 42 H 1.09003 * 109.46641 * 179.97438 * 19 18 16 43 43 H 1.08995 * 109.47477 * 60.00217 * 19 18 16 44 44 H 0.96699 * 113.99639 * 300.00234 * 22 20 19 45 45 H 1.09002 * 109.47095 * 179.97438 * 23 20 19 46 46 H 1.09005 * 109.46870 * 60.00319 * 23 20 19 47 47 H 1.08993 * 109.47498 * 300.00544 * 24 23 20 48 48 H 1.08996 * 109.47021 * 179.97438 * 24 23 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1936 0.0000 4 6 3.5821 1.1953 0.0044 5 6 4.3306 2.5033 0.0097 6 6 4.2813 0.0017 -0.0009 7 6 5.7883 0.0132 -0.0014 8 8 6.2624 0.3594 1.3015 9 14 6.4220 -1.6765 -0.4640 10 6 3.6021 -1.1992 -0.0062 11 6 2.2066 -1.2081 -0.0058 12 6 1.4721 -2.4912 -0.0121 13 8 0.5820 -2.6860 0.7924 14 7 1.7897 -3.4449 -0.9099 15 6 2.9276 -3.2520 -1.8122 16 6 0.9970 -4.6747 -0.9834 17 1 0.2000 -4.6383 -0.2407 18 6 0.3872 -4.8057 -2.3806 19 6 -0.4412 -6.0897 -2.4572 20 6 0.4592 -7.2950 -2.1787 21 1 -0.1309 -8.2098 -2.2337 22 8 1.5045 -7.3437 -3.1520 23 6 1.0690 -7.1640 -0.7816 24 6 1.8974 -5.8800 -0.7050 25 1 -0.3633 -0.1018 1.0226 26 1 -0.3632 0.9365 -0.4231 27 1 -0.3633 -0.8347 -0.5995 28 1 1.6583 2.1289 0.0004 29 1 4.5108 2.8230 -1.0166 30 1 3.7388 3.2585 0.5270 31 1 5.2837 2.3744 0.5227 32 1 6.1459 0.7459 -0.7247 33 1 5.9820 -0.2508 1.9972 34 1 7.9070 -1.6786 -0.4675 35 1 5.9154 -2.6895 0.4964 36 1 4.1491 -2.1305 -0.0108 37 1 3.8449 -3.5622 -1.3117 38 1 2.7840 -3.8509 -2.7114 39 1 3.0006 -2.1991 -2.0847 40 1 -0.2545 -3.9473 -2.5788 41 1 1.1845 -4.8424 -3.1229 42 1 -0.8759 -6.1827 -3.4524 43 1 -1.2384 -6.0526 -1.7149 44 1 1.1902 -7.4266 -4.0627 45 1 1.7101 -8.0229 -0.5830 46 1 0.2717 -7.1269 -0.0392 47 1 2.6946 -5.9171 -1.4473 48 1 2.3314 -5.7865 0.2905 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:42:58 Heat of formation + Delta-G solvation = -93.318038 kcal Electronic energy + Delta-G solvation = -28660.094650 eV Core-core repulsion = 24874.098216 eV Total energy + Delta-G solvation = -3785.996434 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.94686 -40.63423 -39.54565 -37.82174 -37.10002 -35.10425 -34.47481 -33.33179 -31.84753 -30.33386 -29.27958 -28.44606 -27.81002 -25.56444 -23.99744 -23.77752 -23.33151 -21.86111 -20.63591 -20.24416 -18.78800 -17.98061 -17.68743 -17.49954 -17.09795 -16.66321 -16.56521 -16.16411 -15.97729 -15.67446 -15.47775 -14.93226 -14.79964 -14.65101 -14.45087 -14.23751 -14.12500 -13.98638 -13.92273 -13.40363 -13.38085 -13.24819 -13.15660 -13.08844 -12.99336 -12.82286 -12.62263 -12.48085 -12.38217 -12.06130 -11.97290 -11.85650 -11.45970 -11.25215 -10.96671 -10.65748 -10.62102 -9.88937 -9.77103 -9.58852 -5.02628 -0.13840 0.15436 1.24283 1.51161 1.52304 1.86486 1.89557 2.49870 3.32175 3.37523 3.40011 3.56576 3.66104 3.70678 3.74551 3.78300 3.95824 4.05885 4.11401 4.18848 4.22734 4.23095 4.37060 4.44685 4.48514 4.49427 4.52994 4.53997 4.60100 4.63588 4.65100 4.66503 4.81949 4.82715 4.91693 4.93964 4.97713 5.03392 5.03962 5.11429 5.13719 5.14672 5.25261 5.26897 5.36308 5.38668 5.50297 5.53291 5.80427 6.24134 6.41967 6.95291 6.98546 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.036 4.036 3 C -0.128 4.128 4 C -0.032 4.032 5 C -0.125 4.125 6 C -0.129 4.129 7 C -0.073 4.073 8 O -0.541 6.541 9 Si 0.752 3.248 10 C -0.083 4.083 11 C -0.148 4.148 12 C 0.558 3.442 13 O -0.574 6.574 14 N -0.601 5.601 15 C 0.059 3.941 16 C 0.140 3.860 17 H 0.075 0.925 18 C -0.115 4.115 19 C -0.146 4.146 20 C 0.107 3.893 21 H 0.066 0.934 22 O -0.577 6.577 23 C -0.114 4.114 24 C -0.116 4.116 25 H 0.068 0.932 26 H 0.089 0.911 27 H 0.054 0.946 28 H 0.149 0.851 29 H 0.091 0.909 30 H 0.075 0.925 31 H 0.076 0.924 32 H 0.134 0.866 33 H 0.384 0.616 34 H -0.295 1.295 35 H -0.286 1.286 36 H 0.138 0.862 37 H 0.067 0.933 38 H 0.097 0.903 39 H 0.087 0.913 40 H 0.057 0.943 41 H 0.084 0.916 42 H 0.086 0.914 43 H 0.070 0.930 44 H 0.392 0.608 45 H 0.071 0.929 46 H 0.078 0.922 47 H 0.079 0.921 48 H 0.049 0.951 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.080 0.117 -6.881 6.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.037 4.037 3 C -0.146 4.146 4 C -0.032 4.032 5 C -0.182 4.182 6 C -0.129 4.129 7 C -0.182 4.182 8 O -0.349 6.349 9 Si 0.658 3.342 10 C -0.101 4.101 11 C -0.151 4.151 12 C 0.347 3.653 13 O -0.454 6.454 14 N -0.332 5.332 15 C -0.083 4.083 16 C 0.037 3.963 17 H 0.093 0.907 18 C -0.153 4.153 19 C -0.185 4.185 20 C 0.048 3.952 21 H 0.084 0.916 22 O -0.385 6.385 23 C -0.152 4.152 24 C -0.155 4.155 25 H 0.087 0.913 26 H 0.108 0.892 27 H 0.073 0.927 28 H 0.166 0.834 29 H 0.109 0.891 30 H 0.093 0.907 31 H 0.094 0.906 32 H 0.152 0.848 33 H 0.233 0.767 34 H -0.223 1.223 35 H -0.213 1.213 36 H 0.155 0.845 37 H 0.085 0.915 38 H 0.115 0.885 39 H 0.106 0.894 40 H 0.076 0.924 41 H 0.102 0.898 42 H 0.104 0.896 43 H 0.089 0.911 44 H 0.241 0.759 45 H 0.090 0.910 46 H 0.096 0.904 47 H 0.098 0.902 48 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges 0.729 -0.143 -6.040 6.086 hybrid contribution -0.628 -0.080 1.139 1.303 sum 0.101 -0.224 -4.901 4.907 Atomic orbital electron populations 1.20807 0.90292 1.03149 1.02602 1.20086 0.96659 0.91820 0.95103 1.21160 0.93701 0.97784 1.01910 1.20182 0.93394 0.95770 0.93884 1.20998 1.00618 0.92753 1.03783 1.20034 0.96290 0.92482 1.04112 1.25086 0.91185 1.13743 0.88223 1.86571 1.76409 1.54799 1.17151 0.94364 0.77616 0.73268 0.88904 1.21311 0.92518 0.98486 0.97754 1.19598 0.93976 0.92596 1.08949 1.18654 0.82340 0.84044 0.80225 1.90757 1.33679 1.80971 1.40029 1.47944 1.31839 1.17661 1.35758 1.22287 0.87396 1.04253 0.94348 1.21159 0.93588 0.82802 0.98771 0.90680 1.21714 0.99991 0.97857 0.95754 1.22203 0.98268 0.94462 1.03519 1.21740 0.88066 0.96729 0.88669 0.91592 1.86477 1.35235 1.96811 1.19962 1.21549 1.00198 0.97567 0.95846 1.21702 0.98810 0.93467 1.01472 0.91329 0.89227 0.92685 0.83352 0.89079 0.90655 0.90559 0.84835 0.76659 1.22268 1.21294 0.84455 0.91484 0.88450 0.89424 0.92395 0.89757 0.89551 0.91135 0.75865 0.91011 0.90352 0.90219 0.93232 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.43 8.89 71.24 0.63 0.20 16 2 C -0.04 -0.15 5.91 -19.61 -0.12 -0.27 16 3 C -0.13 -0.11 9.31 22.23 0.21 0.10 16 4 C -0.03 0.00 5.89 -19.81 -0.12 -0.12 16 5 C -0.13 0.38 9.31 71.24 0.66 1.04 16 6 C -0.13 0.02 5.25 -19.90 -0.10 -0.08 16 7 C -0.07 0.14 1.88 71.24 0.13 0.27 16 8 O -0.54 -0.67 11.92 -148.98 -1.78 -2.45 16 9 Si 0.75 -1.84 30.24 68.60 2.07 0.23 16 10 C -0.08 -0.12 6.42 22.52 0.14 0.03 16 11 C -0.15 -0.79 4.86 -20.09 -0.10 -0.89 16 12 C 0.56 4.86 6.31 86.79 0.55 5.41 16 13 O -0.57 -9.36 15.20 -3.88 -0.06 -9.41 16 14 N -0.60 -1.88 2.76 -825.98 -2.28 -4.16 16 15 C 0.06 -0.22 8.11 127.77 1.04 0.82 16 16 C 0.14 0.37 2.51 44.99 0.11 0.48 16 17 H 0.07 0.60 6.91 -2.39 -0.02 0.58 16 18 C -0.11 0.18 5.05 30.59 0.15 0.33 16 19 C -0.15 0.56 5.64 30.59 0.17 0.74 16 20 C 0.11 -0.33 3.77 30.59 0.12 -0.21 16 21 H 0.07 -0.30 8.14 -2.38 -0.02 -0.32 16 22 O -0.58 1.58 11.97 -148.98 -1.78 -0.20 16 23 C -0.11 0.04 5.66 30.59 0.17 0.21 16 24 C -0.12 -0.17 5.06 30.60 0.15 -0.02 16 25 H 0.07 0.44 8.14 -2.39 -0.02 0.43 16 26 H 0.09 -0.08 8.05 -2.39 -0.02 -0.10 16 27 H 0.05 0.35 7.09 -2.39 -0.02 0.33 16 28 H 0.15 -0.46 8.06 -2.91 -0.02 -0.48 16 29 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 30 H 0.07 -0.29 8.08 -2.39 -0.02 -0.31 16 31 H 0.08 -0.07 6.18 -2.39 -0.01 -0.09 16 32 H 0.13 -0.63 7.37 -2.39 -0.02 -0.65 16 33 H 0.38 -1.10 8.70 -74.06 -0.64 -1.74 16 34 H -0.30 -1.40 7.11 99.48 0.71 -0.70 16 35 H -0.29 -0.60 6.68 99.48 0.66 0.07 16 36 H 0.14 -0.05 3.19 -2.91 -0.01 -0.06 16 37 H 0.07 -0.36 7.11 -2.39 -0.02 -0.38 16 38 H 0.10 -0.64 6.44 -2.39 -0.02 -0.66 16 39 H 0.09 -0.46 6.30 -2.39 -0.02 -0.48 16 40 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 41 H 0.08 -0.27 6.21 -2.39 -0.01 -0.29 16 42 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 43 H 0.07 -0.19 8.14 -2.39 -0.02 -0.20 16 44 H 0.39 -3.91 9.08 -74.06 -0.67 -4.58 16 45 H 0.07 0.01 8.14 -2.39 -0.02 0.00 16 46 H 0.08 -0.05 8.14 -2.38 -0.02 -0.07 16 47 H 0.08 0.08 7.21 -2.39 -0.02 0.07 16 48 H 0.05 0.21 8.14 -2.39 -0.02 0.19 16 Total: 0.00 -18.20 364.97 -0.35 -18.54 By element: Atomic # 1 Polarization: -10.27 SS G_CDS: -0.34 Total: -10.61 kcal Atomic # 6 Polarization: 4.24 SS G_CDS: 3.81 Total: 8.06 kcal Atomic # 7 Polarization: -1.88 SS G_CDS: -2.28 Total: -4.16 kcal Atomic # 8 Polarization: -8.45 SS G_CDS: -3.62 Total: -12.07 kcal Atomic # 14 Polarization: -1.84 SS G_CDS: 2.07 Total: 0.23 kcal Total: -18.20 -0.35 -18.54 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.776 kcal (2) G-P(sol) polarization free energy of solvation -18.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.347 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.542 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.318 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds