Wall clock time and date at job start Sun Mar 7 2021 05:43:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36763 * 125.80100 * 2 1 4 4 C 1.47257 * 126.94584 * 359.97345 * 3 2 1 5 5 O 1.21631 * 119.99785 * 24.77186 * 4 3 2 6 6 N 1.34773 * 120.00378 * 204.77956 * 4 3 2 7 7 C 1.46507 * 120.00119 * 5.69565 * 6 4 3 8 8 C 1.46503 * 120.00312 * 185.69656 * 6 4 3 9 9 H 1.08997 * 109.46839 * 299.16561 * 8 6 4 10 10 C 1.52997 * 109.47348 * 59.17010 * 8 6 4 11 11 C 1.52996 * 109.47165 * 59.99786 * 10 8 6 12 12 C 1.53002 * 109.47156 * 60.00475 * 11 10 8 13 13 H 1.08998 * 109.47166 * 59.99659 * 12 11 10 14 14 O 1.42895 * 109.47062 * 180.02562 * 12 11 10 15 15 C 1.53007 * 109.46771 * 299.99889 * 12 11 10 16 16 C 1.53000 * 109.47246 * 179.17230 * 8 6 4 17 17 C 1.46686 * 106.11581 * 179.71426 * 3 2 1 18 18 C 1.34489 * 106.33291 * 0.25828 * 17 3 2 19 19 C 1.50699 * 125.57517 * 180.02562 * 18 17 3 20 20 O 1.42901 * 109.47273 * 65.00006 * 19 18 17 21 21 Si 1.86298 * 109.47309 * 185.00130 * 19 18 17 22 22 N 1.34661 * 125.79952 * 180.15886 * 2 1 3 23 23 H 1.09004 * 109.46904 * 90.00167 * 1 2 3 24 24 H 1.08997 * 109.47474 * 209.99930 * 1 2 3 25 25 H 1.08994 * 109.47273 * 330.00902 * 1 2 3 26 26 H 1.09002 * 109.46948 * 275.90320 * 7 6 4 27 27 H 1.08996 * 109.46854 * 35.89386 * 7 6 4 28 28 H 1.08997 * 109.47204 * 155.90076 * 7 6 4 29 29 H 1.09004 * 109.46709 * 299.99959 * 10 8 6 30 30 H 1.08998 * 109.47188 * 180.02562 * 10 8 6 31 31 H 1.08998 * 109.47361 * 300.00253 * 11 10 8 32 32 H 1.09001 * 109.47070 * 180.02562 * 11 10 8 33 33 H 0.96707 * 113.99601 * 180.02562 * 14 12 11 34 34 H 1.08997 * 109.46948 * 179.97438 * 15 12 11 35 35 H 1.08998 * 109.47087 * 299.99818 * 15 12 11 36 36 H 1.09001 * 109.47408 * 59.99701 * 16 8 6 37 37 H 1.08998 * 109.47208 * 179.97438 * 16 8 6 38 38 H 1.08004 * 126.83973 * 180.22882 * 17 3 2 39 39 H 1.09001 * 109.47158 * 304.99974 * 19 18 17 40 40 H 0.96701 * 114.00024 * 59.99682 * 20 19 18 41 41 H 1.48499 * 110.00227 * 180.02562 * 21 19 18 42 42 H 1.48501 * 109.99787 * 301.31470 * 21 19 18 43 43 H 0.97001 * 124.85211 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1092 0.0000 4 6 1.8702 2.5155 -0.0005 5 8 0.7763 2.8127 0.4403 6 7 2.6825 3.4733 -0.4897 7 6 3.9455 3.1040 -1.1339 8 6 2.3027 4.8837 -0.3772 9 1 1.3664 5.0514 -0.9094 10 6 2.1231 5.2475 1.0980 11 6 3.4374 5.0121 1.8450 12 6 4.5347 5.8861 1.2343 13 1 4.2521 6.9355 1.3179 14 8 5.7624 5.6659 1.9315 15 6 4.7143 5.5224 -0.2410 16 6 3.3999 5.7577 -0.9880 17 6 3.6881 0.6151 0.0070 18 6 3.6095 -0.7275 0.0048 19 6 4.7818 -1.6744 0.0106 20 8 5.5028 -1.5323 1.2362 21 14 4.1665 -3.4256 -0.1485 22 7 2.2947 -1.0922 -0.0030 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3634 -0.8899 0.5138 25 1 -0.3633 0.8900 0.5137 26 1 4.7146 2.9668 -0.3738 27 1 3.8125 2.1749 -1.6880 28 1 4.2489 3.8956 -1.8191 29 1 1.3413 4.6248 1.5332 30 1 1.8400 6.2968 1.1817 31 1 3.7200 3.9628 1.7613 32 1 3.3093 5.2709 2.8961 33 1 6.5039 6.1890 1.5972 34 1 5.4957 6.1453 -0.6763 35 1 4.9969 4.4730 -0.3247 36 1 3.5279 5.4986 -2.0390 37 1 3.1171 6.8071 -0.9047 38 1 4.5890 1.2108 0.0124 39 1 5.4399 -1.4430 -0.8270 40 1 4.9780 -1.7231 2.0257 41 1 5.3131 -4.3693 -0.1434 42 1 3.2432 -3.7431 0.9704 43 1 1.9733 -2.0074 -0.0059 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15557736_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:43:08 Heat of formation + Delta-G solvation = -48.680246 kcal Electronic energy + Delta-G solvation = -25628.111999 eV Core-core repulsion = 22062.389052 eV Total energy + Delta-G solvation = -3565.722946 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.56418 -41.31528 -39.07113 -37.92609 -37.05395 -34.80789 -32.83696 -32.16338 -32.11873 -30.12696 -28.96333 -27.49933 -25.45526 -24.03810 -23.67228 -22.36982 -21.68282 -20.65140 -19.33210 -18.71528 -18.12594 -17.70267 -17.27673 -16.90954 -16.63774 -16.37052 -15.92629 -15.47461 -15.26057 -15.16986 -14.98274 -14.60009 -14.48679 -14.13212 -13.99446 -13.90025 -13.53719 -13.46052 -13.34385 -13.22408 -12.82159 -12.77604 -12.63893 -12.46945 -12.18193 -12.09022 -11.89777 -11.65608 -11.13140 -10.82276 -10.70376 -10.37894 -9.78931 -9.45144 -9.09124 -5.23330 0.83916 1.01297 1.29425 1.31072 1.71599 1.98991 2.27646 2.58794 3.21684 3.25832 3.53983 3.64755 3.72502 3.84714 3.99108 4.05717 4.16820 4.21349 4.23864 4.26667 4.39562 4.40620 4.43953 4.50528 4.53315 4.59127 4.66990 4.67866 4.75847 4.83724 4.88354 4.99473 5.00442 5.13964 5.14262 5.24655 5.30902 5.34292 5.42092 5.72537 5.78447 5.92731 6.26416 6.36217 6.61084 6.75217 7.48685 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.119 3.881 3 C -0.237 4.237 4 C 0.596 3.404 5 O -0.545 6.545 6 N -0.604 5.604 7 C 0.069 3.931 8 C 0.152 3.848 9 H 0.079 0.921 10 C -0.134 4.134 11 C -0.108 4.108 12 C 0.106 3.894 13 H 0.052 0.948 14 O -0.568 6.568 15 C -0.180 4.180 16 C -0.124 4.124 17 C -0.129 4.129 18 C -0.030 4.030 19 C -0.039 4.039 20 O -0.522 6.522 21 Si 0.669 3.331 22 N -0.546 5.546 23 H 0.079 0.921 24 H 0.067 0.933 25 H 0.105 0.895 26 H 0.062 0.938 27 H 0.074 0.926 28 H 0.079 0.921 29 H 0.090 0.910 30 H 0.072 0.928 31 H 0.069 0.931 32 H 0.067 0.933 33 H 0.377 0.623 34 H 0.065 0.935 35 H 0.097 0.903 36 H 0.075 0.925 37 H 0.080 0.920 38 H 0.151 0.849 39 H 0.129 0.871 40 H 0.377 0.623 41 H -0.246 1.246 42 H -0.257 1.257 43 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.651 -1.194 -4.701 4.894 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C 0.000 4.000 3 C -0.246 4.246 4 C 0.387 3.613 5 O -0.424 6.424 6 N -0.337 5.337 7 C -0.074 4.074 8 C 0.049 3.951 9 H 0.097 0.903 10 C -0.172 4.172 11 C -0.145 4.145 12 C 0.048 3.952 13 H 0.070 0.930 14 O -0.374 6.374 15 C -0.218 4.218 16 C -0.162 4.162 17 C -0.153 4.153 18 C -0.138 4.138 19 C -0.151 4.151 20 O -0.328 6.328 21 Si 0.569 3.431 22 N -0.145 5.145 23 H 0.098 0.902 24 H 0.086 0.914 25 H 0.124 0.876 26 H 0.080 0.920 27 H 0.093 0.907 28 H 0.098 0.902 29 H 0.108 0.892 30 H 0.091 0.909 31 H 0.087 0.913 32 H 0.085 0.915 33 H 0.224 0.776 34 H 0.084 0.916 35 H 0.115 0.885 36 H 0.093 0.907 37 H 0.099 0.901 38 H 0.169 0.831 39 H 0.147 0.853 40 H 0.225 0.775 41 H -0.170 1.170 42 H -0.182 1.182 43 H 0.251 0.749 Dipole moment (debyes) X Y Z Total from point charges 0.152 -2.217 -4.175 4.730 hybrid contribution 0.560 0.398 0.765 1.028 sum 0.712 -1.819 -3.411 3.931 Atomic orbital electron populations 1.20669 0.86770 1.04933 1.03683 1.20341 0.93649 0.85279 1.00713 1.20082 0.93128 0.91998 1.19420 1.17313 0.83387 0.83926 0.76689 1.90717 1.21224 1.82800 1.47610 1.47617 1.21348 1.05735 1.59033 1.22389 0.85652 1.01831 0.97480 1.20996 0.97803 0.79736 0.96553 0.90290 1.21918 0.97983 1.02435 0.94863 1.21390 0.93121 1.00396 0.99637 1.21810 0.84909 0.98176 0.90349 0.93002 1.86545 1.19948 1.69867 1.60991 1.22936 0.97646 1.05086 0.96089 1.21790 0.94420 1.00248 0.99731 1.22095 0.95915 0.92360 1.04929 1.20499 0.84290 0.95668 1.13361 1.24370 0.93475 1.06911 0.90295 1.86657 1.40183 1.90768 1.15183 0.95622 0.83283 0.75137 0.89053 1.41723 1.05593 1.08426 1.58764 0.90231 0.91371 0.87619 0.92004 0.90699 0.90230 0.89154 0.90909 0.91276 0.91466 0.77650 0.91581 0.88524 0.90653 0.90094 0.83133 0.85316 0.77472 1.16959 1.18156 0.74861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.01 10.14 36.00 0.37 0.38 16 2 C 0.12 0.12 7.17 -81.89 -0.59 -0.46 16 3 C -0.24 -0.56 5.65 -103.36 -0.58 -1.14 16 4 C 0.60 2.15 7.21 -12.60 -0.09 2.06 16 5 O -0.54 -3.36 13.36 5.25 0.07 -3.29 16 6 N -0.60 -0.73 2.25 -175.26 -0.39 -1.12 16 7 C 0.07 -0.08 6.74 59.85 0.40 0.33 16 8 C 0.15 0.10 2.90 -67.93 -0.20 -0.09 16 9 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 10 C -0.13 -0.21 5.23 -26.73 -0.14 -0.35 16 11 C -0.11 -0.23 5.42 -26.73 -0.14 -0.37 16 12 C 0.11 0.06 3.47 -26.73 -0.09 -0.03 16 13 H 0.05 0.00 8.14 -51.93 -0.42 -0.42 16 14 O -0.57 -0.95 13.32 -35.23 -0.47 -1.42 16 15 C -0.18 0.24 4.89 -26.73 -0.13 0.11 16 16 C -0.12 0.19 4.91 -26.73 -0.13 0.06 16 17 C -0.13 -0.12 8.75 -37.50 -0.33 -0.45 16 18 C -0.03 0.01 6.09 -81.86 -0.50 -0.49 16 19 C -0.04 0.05 2.98 36.01 0.11 0.16 16 20 O -0.52 -0.25 12.88 -35.23 -0.45 -0.70 16 21 Si 0.67 -1.62 30.96 -169.99 -5.26 -6.88 16 22 N -0.55 0.51 5.41 -5.42 -0.03 0.48 16 23 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 24 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 25 H 0.11 0.22 6.34 -51.93 -0.33 -0.11 16 26 H 0.06 -0.07 5.35 -51.93 -0.28 -0.35 16 27 H 0.07 -0.09 6.28 -51.93 -0.33 -0.42 16 28 H 0.08 -0.20 4.95 -51.93 -0.26 -0.45 16 29 H 0.09 0.36 6.30 -51.93 -0.33 0.03 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.07 0.25 7.60 -51.93 -0.39 -0.14 16 32 H 0.07 0.20 8.14 -51.93 -0.42 -0.23 16 33 H 0.38 -0.88 9.08 45.56 0.41 -0.47 16 34 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.10 -0.10 3.66 -51.93 -0.19 -0.29 16 36 H 0.07 -0.17 6.89 -51.93 -0.36 -0.53 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.15 0.02 5.77 -52.48 -0.30 -0.28 16 39 H 0.13 -0.31 7.96 -51.93 -0.41 -0.73 16 40 H 0.38 -0.72 8.70 45.56 0.40 -0.33 16 41 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 42 H -0.26 0.16 7.11 56.52 0.40 0.56 16 43 H 0.41 -1.35 6.72 -40.82 -0.27 -1.62 16 LS Contribution 324.70 15.07 4.89 4.89 Total: 0.00 -7.99 324.70 -8.92 -16.91 By element: Atomic # 1 Polarization: -3.35 SS G_CDS: -5.22 Total: -8.57 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: -2.05 Total: -0.29 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -0.42 Total: -0.65 kcal Atomic # 8 Polarization: -4.56 SS G_CDS: -0.85 Total: -5.41 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.26 Total: -6.88 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -7.99 -8.92 -16.91 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.771 kcal (2) G-P(sol) polarization free energy of solvation -7.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.764 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.916 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.909 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.680 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds