Wall clock time and date at job start Sun Mar 7 2021 07:01:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35659 * 116.99627 * 2 1 4 4 C 1.38400 * 120.12089 * 359.97438 * 3 2 1 5 5 C 1.38724 * 120.03028 * 180.02562 * 4 3 2 6 6 O 1.35721 * 119.86330 * 179.97438 * 5 4 3 7 7 C 1.42902 * 116.99672 * 0.02562 * 6 5 4 8 8 C 1.39149 * 120.27741 * 359.97438 * 5 4 3 9 9 C 1.50702 * 119.88103 * 180.02562 * 8 5 4 10 10 O 1.42902 * 109.46677 * 284.99814 * 9 8 5 11 11 Si 1.86301 * 109.47034 * 165.00318 * 9 8 5 12 12 C 1.37585 * 120.23603 * 359.74349 * 8 5 4 13 13 C 1.39816 * 119.96634 * 0.51350 * 12 8 5 14 14 C 1.47292 * 120.13577 * 179.76738 * 13 12 8 15 15 O 1.21627 * 120.00159 * 179.72284 * 14 13 12 16 16 N 1.34772 * 120.00433 * 359.71946 * 14 13 12 17 17 C 1.46499 * 120.00387 * 180.02562 * 16 14 13 18 18 H 1.08993 * 112.85189 * 23.79878 * 17 16 14 19 19 C 1.53783 * 113.61517 * 155.00009 * 17 16 14 20 20 C 1.53784 * 87.07951 * 89.19778 * 19 17 16 21 21 H 1.08999 * 113.61422 * 270.79929 * 20 19 17 22 22 N 1.46503 * 113.61377 * 139.98029 * 20 19 17 23 23 C 1.36885 * 126.39872 * 121.52680 * 22 20 19 24 24 C 1.34668 * 106.81739 * 179.74288 * 23 22 20 25 25 N 1.34129 * 108.02266 * 359.97438 * 24 23 22 26 26 C 1.30503 * 109.25413 * 359.97438 * 25 24 23 27 27 C 1.53780 * 87.17358 * 25.39279 * 20 19 17 28 28 H 1.08996 * 109.47312 * 60.00104 * 1 2 3 29 29 H 1.09007 * 109.46579 * 179.97438 * 1 2 3 30 30 H 1.08995 * 109.47583 * 299.99978 * 1 2 3 31 31 H 1.07994 * 119.98289 * 359.97438 * 4 3 2 32 32 H 1.09002 * 109.46898 * 60.00129 * 7 6 5 33 33 H 1.08996 * 109.46559 * 179.97438 * 7 6 5 34 34 H 1.08995 * 109.46913 * 300.00020 * 7 6 5 35 35 H 1.08994 * 109.47105 * 45.00372 * 9 8 5 36 36 H 0.96696 * 114.00298 * 299.99770 * 10 9 8 37 37 H 1.48490 * 110.00084 * 180.02562 * 11 9 8 38 38 H 1.48506 * 109.99697 * 301.31828 * 11 9 8 39 39 H 1.07998 * 120.01879 * 180.25498 * 12 8 5 40 40 H 0.96999 * 119.99793 * 0.02562 * 16 14 13 41 41 H 1.08992 * 113.61341 * 334.65190 * 19 17 16 42 42 H 1.08997 * 113.61361 * 203.74621 * 19 17 16 43 43 H 1.07999 * 126.58860 * 359.77304 * 23 22 20 44 44 H 1.08001 * 125.98408 * 180.02562 * 24 23 22 45 45 H 1.07995 * 125.64492 * 179.97438 * 26 25 24 46 46 H 1.08994 * 113.61909 * 89.15791 * 27 20 19 47 47 H 1.09005 * 113.61277 * 220.06262 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0447 1.2088 0.0000 4 6 1.2933 2.3710 -0.0005 5 6 1.9250 3.6061 -0.0011 6 8 1.1848 4.7437 -0.0021 7 6 -0.2362 4.5930 -0.0021 8 6 3.3143 3.6836 -0.0005 9 6 3.9913 5.0300 -0.0005 10 8 3.8942 5.6118 -1.3021 11 14 5.7859 4.8228 0.4547 12 6 4.0723 2.5353 0.0058 13 6 3.4461 1.2852 0.0010 14 6 4.2539 0.0535 0.0026 15 8 3.7066 -1.0327 0.0035 16 7 5.5994 0.1300 0.0031 17 6 6.4028 -1.0950 0.0042 18 1 5.8667 -1.9532 -0.4008 19 6 7.8088 -0.9102 -0.5909 20 6 8.2750 -0.5421 0.8276 21 1 8.1910 0.5211 1.0527 22 7 9.5858 -1.0956 1.1766 23 6 10.6935 -0.3850 1.5532 24 6 11.6710 -1.2815 1.7860 25 7 11.1736 -2.5062 1.5584 26 6 9.9248 -2.4027 1.1939 27 6 7.0946 -1.3777 1.3502 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0278 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 0.2148 2.3164 -0.0014 32 1 -0.5434 4.0446 0.8884 33 1 -0.7058 5.5767 -0.0025 34 1 -0.5433 4.0430 -0.8915 35 1 3.5050 5.6811 0.7258 36 1 4.3067 5.0851 -2.0002 37 1 6.4645 6.1436 0.4589 38 1 5.9004 4.1892 1.7929 39 1 5.1503 2.5995 0.0104 40 1 6.0359 0.9963 0.0028 41 1 7.8776 -0.0859 -1.3007 42 1 8.2477 -1.8335 -0.9689 43 1 10.7688 0.6884 1.6462 44 1 12.6786 -1.0542 2.1016 45 1 9.2713 -3.2258 0.9456 46 1 7.3379 -2.4289 1.5038 47 1 6.5876 -0.9302 2.2052 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608530_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:06 Heat of formation + Delta-G solvation = -3.747331 kcal Electronic energy + Delta-G solvation = -32490.551218 eV Core-core repulsion = 28029.764044 eV Total energy + Delta-G solvation = -4460.787174 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.05128 -42.11816 -40.94110 -40.08570 -39.10423 -38.42964 -36.98114 -34.85631 -33.00017 -32.24047 -31.50020 -30.19874 -29.00467 -28.21249 -26.85569 -26.26349 -26.01670 -24.59579 -23.03071 -22.31061 -22.07072 -21.63797 -20.39206 -19.96042 -19.00094 -18.38846 -18.09752 -17.90740 -17.24298 -17.05876 -16.63675 -16.48694 -16.30283 -16.21777 -15.79959 -15.76275 -15.68799 -15.53755 -15.28367 -15.05405 -14.75942 -14.52539 -14.34861 -14.19664 -14.00270 -13.70993 -13.60254 -13.43120 -13.23577 -12.95063 -12.68293 -12.55772 -12.53597 -12.26422 -12.04798 -11.99542 -11.66113 -11.60424 -10.96147 -10.88830 -10.43806 -10.38171 -10.16425 -9.93058 -9.39462 -9.20427 -5.06769 -0.27402 0.07453 1.16715 1.30476 1.64355 1.73417 1.92256 2.01241 2.03060 2.10760 2.16686 2.27156 2.59184 3.25271 3.42422 3.43843 3.52014 3.61021 3.72670 3.74318 3.81629 3.84997 3.91484 4.05226 4.10320 4.15487 4.22135 4.24710 4.25904 4.27540 4.46215 4.49903 4.53621 4.61766 4.64589 4.65135 4.68429 4.73852 4.80011 4.87698 4.90086 4.94703 4.99716 5.02366 5.28940 5.38566 5.54195 5.89088 6.01603 6.27004 6.34581 6.52052 6.85493 7.20862 7.24645 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.303 6.303 3 C 0.217 3.783 4 C -0.313 4.313 5 C 0.211 3.789 6 O -0.315 6.315 7 C 0.013 3.987 8 C -0.204 4.204 9 C -0.065 4.065 10 O -0.555 6.555 11 Si 0.779 3.221 12 C 0.012 3.988 13 C -0.225 4.225 14 C 0.569 3.431 15 O -0.560 6.560 16 N -0.701 5.701 17 C 0.128 3.872 18 H 0.099 0.901 19 C -0.137 4.137 20 C 0.107 3.893 21 H 0.150 0.850 22 N -0.444 5.444 23 C -0.045 4.045 24 C -0.068 4.068 25 N -0.544 5.544 26 C 0.174 3.826 27 C -0.158 4.158 28 H 0.071 0.929 29 H 0.113 0.887 30 H 0.069 0.931 31 H 0.160 0.840 32 H 0.068 0.932 33 H 0.117 0.883 34 H 0.069 0.931 35 H 0.096 0.904 36 H 0.393 0.607 37 H -0.298 1.298 38 H -0.270 1.270 39 H 0.172 0.828 40 H 0.414 0.586 41 H 0.110 0.890 42 H 0.105 0.895 43 H 0.205 0.795 44 H 0.172 0.828 45 H 0.220 0.780 46 H 0.101 0.899 47 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.435 4.500 -2.643 6.247 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.213 6.213 3 C 0.168 3.832 4 C -0.332 4.332 5 C 0.163 3.837 6 O -0.226 6.226 7 C -0.081 4.081 8 C -0.206 4.206 9 C -0.174 4.174 10 O -0.362 6.362 11 Si 0.682 3.318 12 C -0.006 4.006 13 C -0.229 4.229 14 C 0.359 3.641 15 O -0.439 6.439 16 N -0.355 5.355 17 C 0.022 3.978 18 H 0.117 0.883 19 C -0.176 4.176 20 C 0.005 3.995 21 H 0.168 0.832 22 N -0.126 5.126 23 C -0.179 4.179 24 C -0.214 4.214 25 N -0.263 5.263 26 C -0.109 4.109 27 C -0.197 4.197 28 H 0.089 0.911 29 H 0.131 0.869 30 H 0.088 0.912 31 H 0.178 0.822 32 H 0.087 0.913 33 H 0.136 0.864 34 H 0.088 0.912 35 H 0.113 0.887 36 H 0.243 0.757 37 H -0.226 1.226 38 H -0.196 1.196 39 H 0.188 0.812 40 H 0.253 0.747 41 H 0.128 0.872 42 H 0.123 0.877 43 H 0.222 0.778 44 H 0.189 0.811 45 H 0.236 0.764 46 H 0.120 0.880 47 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -3.106 3.714 -1.712 5.136 hybrid contribution -1.590 1.148 0.358 1.993 sum -4.695 4.863 -1.355 6.894 Atomic orbital electron populations 1.23459 0.76611 1.05750 1.02551 1.86360 1.23100 1.25862 1.86007 1.19008 0.91289 0.84586 0.88351 1.21414 1.01992 0.90873 1.18931 1.18997 0.91125 0.84854 0.88709 1.86146 1.21056 1.28911 1.86534 1.23451 0.76332 1.05773 1.02594 1.19629 0.90809 0.96892 1.13225 1.25134 1.11681 0.91617 0.88963 1.86516 1.82683 1.50238 1.16813 0.94402 0.73176 0.81664 0.82518 1.20857 0.99776 0.88528 0.91460 1.19116 0.90604 0.93897 1.19312 1.17956 0.82461 0.88203 0.75514 1.90844 1.72320 1.30243 1.50455 1.45397 1.04827 1.09729 1.75519 1.21591 0.91258 0.88602 0.96398 0.88318 1.23788 0.92847 1.05191 0.95782 1.23506 0.78071 1.00693 0.97280 0.83227 1.45721 1.10897 1.06956 1.48979 1.23232 0.86926 1.00248 1.07464 1.22652 1.01364 0.88581 1.08849 1.70268 1.09385 1.27075 1.19556 1.25223 0.93740 0.87212 1.04693 1.23960 0.95110 1.01851 0.98772 0.91063 0.86864 0.91239 0.82232 0.91299 0.86433 0.91212 0.88678 0.75727 1.22624 1.19580 0.81173 0.74724 0.87165 0.87671 0.77783 0.81054 0.76379 0.88038 0.90192 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.30 -1.84 8.56 -68.79 -0.59 -2.43 16 3 C 0.22 0.77 6.70 22.82 0.15 0.93 16 4 C -0.31 -0.04 8.01 22.42 0.18 0.14 16 5 C 0.21 0.23 6.67 22.61 0.15 0.38 16 6 O -0.31 -0.54 9.80 -90.43 -0.89 -1.42 16 7 C 0.01 -0.07 9.80 113.37 1.11 1.04 16 8 C -0.20 0.32 5.27 -19.80 -0.10 0.22 16 9 C -0.07 0.13 2.37 71.24 0.17 0.30 16 10 O -0.55 0.44 12.88 -148.98 -1.92 -1.48 16 11 Si 0.78 -5.36 29.90 68.60 2.05 -3.31 16 12 C 0.01 -0.06 8.14 22.50 0.18 0.13 16 13 C -0.23 -0.25 5.89 -20.00 -0.12 -0.37 16 14 C 0.57 1.62 7.76 86.63 0.67 2.29 16 15 O -0.56 -6.76 14.75 16.84 0.25 -6.51 16 16 N -0.70 4.29 5.21 -443.14 -2.31 1.98 16 17 C 0.13 -0.79 4.33 45.58 0.20 -0.60 16 18 H 0.10 -0.14 7.46 -2.39 -0.02 -0.16 16 19 C -0.14 1.43 7.50 31.12 0.23 1.67 16 20 C 0.11 -0.98 4.51 45.52 0.21 -0.77 16 21 H 0.15 -2.16 8.14 -2.39 -0.02 -2.18 16 22 N -0.44 1.13 2.94 -503.80 -1.48 -0.35 16 23 C -0.05 0.05 11.58 83.09 0.96 1.01 16 24 C -0.07 -0.36 11.87 83.52 0.99 0.63 16 25 N -0.54 -5.17 11.25 -200.31 -2.25 -7.42 16 26 C 0.17 0.40 11.33 180.26 2.04 2.45 16 27 C -0.16 1.02 7.45 31.18 0.23 1.25 16 28 H 0.07 -0.41 7.66 -2.39 -0.02 -0.42 16 29 H 0.11 -0.50 8.14 -2.38 -0.02 -0.52 16 30 H 0.07 -0.38 7.66 -2.39 -0.02 -0.40 16 31 H 0.16 -0.68 4.50 -2.91 -0.01 -0.69 16 32 H 0.07 -0.52 7.65 -2.39 -0.02 -0.54 16 33 H 0.12 -0.93 8.14 -2.39 -0.02 -0.95 16 34 H 0.07 -0.51 7.65 -2.39 -0.02 -0.53 16 35 H 0.10 0.15 7.82 -2.39 -0.02 0.13 16 36 H 0.39 -3.86 8.70 -74.06 -0.64 -4.51 16 37 H -0.30 -0.46 7.11 99.48 0.71 0.25 16 38 H -0.27 0.99 7.11 99.48 0.71 1.70 16 39 H 0.17 -2.26 3.42 -2.91 -0.01 -2.27 16 40 H 0.41 -5.62 6.72 -92.71 -0.62 -6.24 16 41 H 0.11 -1.52 8.14 -2.39 -0.02 -1.54 16 42 H 0.10 -0.96 7.87 -2.39 -0.02 -0.98 16 43 H 0.21 -1.75 8.06 -2.91 -0.02 -1.78 16 44 H 0.17 0.41 8.06 -2.91 -0.02 0.39 16 45 H 0.22 -0.74 7.50 -2.91 -0.02 -0.76 16 46 H 0.10 -0.60 6.98 -2.39 -0.02 -0.62 16 47 H 0.08 -0.37 8.14 -2.38 -0.02 -0.39 16 Total: 0.00 -33.20 386.90 1.04 -32.16 By element: Atomic # 1 Polarization: -22.82 SS G_CDS: -0.19 Total: -23.00 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: 8.37 Total: 11.79 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -6.05 Total: -5.80 kcal Atomic # 8 Polarization: -8.70 SS G_CDS: -3.15 Total: -11.84 kcal Atomic # 14 Polarization: -5.36 SS G_CDS: 2.05 Total: -3.31 kcal Total: -33.20 1.04 -32.16 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.414 kcal (2) G-P(sol) polarization free energy of solvation -33.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.043 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.161 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds