Wall clock time and date at job start Sun Mar 7 2021 07:04:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50699 * 109.46603 * 119.99410 * 2 1 3 5 5 C 1.38250 * 119.94363 * 244.72997 * 4 2 1 6 6 C 1.38172 * 120.05449 * 179.72884 * 5 4 2 7 7 C 1.38703 * 119.94354 * 0.54454 * 6 5 4 8 8 O 1.35903 * 120.05638 * 179.70879 * 7 6 5 9 9 C 1.42894 * 117.00038 * 0.02562 * 8 7 6 10 10 C 1.50696 * 109.47500 * 180.02562 * 9 8 7 11 11 O 1.21285 * 119.99517 * 359.97438 * 10 9 8 12 12 N 1.34768 * 120.00227 * 180.02562 * 10 9 8 13 13 C 1.46506 * 120.00185 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.84654 * 25.33373 * 13 12 10 15 15 C 1.53782 * 113.61626 * 156.52879 * 13 12 10 16 16 C 1.53781 * 87.07899 * 139.98096 * 15 13 12 17 17 H 1.08995 * 113.61615 * 220.01696 * 16 15 13 18 18 N 1.46507 * 113.61012 * 89.12023 * 16 15 13 19 19 C 1.36881 * 126.39669 * 119.71742 * 18 16 15 20 20 C 1.34668 * 106.81475 * 179.83820 * 19 18 16 21 21 N 1.34128 * 108.02339 * 0.41887 * 20 19 18 22 22 C 1.30508 * 109.25422 * 359.73190 * 21 20 19 23 23 C 1.53778 * 113.61451 * 254.13856 * 13 12 10 24 24 C 1.38762 * 119.88925 * 359.72752 * 7 6 5 25 25 N 1.48007 * 120.02722 * 180.02562 * 24 7 6 26 26 O 1.21793 * 119.99951 * 179.97438 * 25 24 7 27 27 O 1.21794 * 119.99864 * 359.97438 * 25 24 7 28 28 C 1.38121 * 119.94211 * 0.02562 * 24 7 6 29 29 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 30 30 H 1.08996 * 109.47455 * 239.99290 * 2 1 3 31 31 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 32 32 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 33 33 H 1.08003 * 119.97006 * 359.97438 * 5 4 2 34 34 H 1.08000 * 120.02384 * 180.27848 * 6 5 4 35 35 H 1.09007 * 109.47025 * 300.00436 * 9 8 7 36 36 H 1.09004 * 109.46877 * 60.00343 * 9 8 7 37 37 H 0.96998 * 120.00580 * 0.02562 * 12 10 9 38 38 H 1.08997 * 113.61680 * 254.53182 * 15 13 12 39 39 H 1.09001 * 113.60935 * 25.35061 * 15 13 12 40 40 H 1.08001 * 126.59175 * 359.96982 * 19 18 16 41 41 H 1.08003 * 125.99149 * 180.11212 * 20 19 18 42 42 H 1.07993 * 125.64920 * 179.97438 * 22 21 20 43 43 H 1.08993 * 113.61826 * 334.56594 * 23 13 12 44 44 H 1.09004 * 113.61210 * 105.47017 * 23 13 12 45 45 H 1.07998 * 119.96813 * 180.02562 * 28 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6434 -0.0121 2.1880 6 6 3.1001 -0.6598 3.3199 7 6 2.8533 -2.0141 3.4896 8 8 3.3066 -2.6548 4.5991 9 6 4.0299 -1.8715 5.5505 10 6 4.4501 -2.7448 6.7046 11 8 4.1584 -3.9220 6.7118 12 7 5.1491 -2.2174 7.7290 13 6 5.5572 -3.0662 8.8512 14 1 5.6446 -4.1175 8.5768 15 6 6.7747 -2.5271 9.6206 16 6 6.0611 -2.9752 10.9071 17 1 6.1644 -2.2702 11.7319 18 7 6.3631 -4.3552 11.2953 19 6 6.9470 -4.7606 12.4651 20 6 7.0346 -6.1034 12.4119 21 7 6.5268 -6.5062 11.2376 22 6 6.1225 -5.4643 10.5635 23 6 4.7391 -2.8299 10.1317 24 6 2.1432 -2.7139 2.5244 25 7 1.8776 -4.1590 2.7027 26 8 1.2539 -4.7726 1.8555 27 8 2.2828 -4.7345 3.6967 28 6 1.6844 -2.0607 1.3972 29 1 -0.3934 0.4417 0.7649 30 1 1.7924 -0.5139 -0.8899 31 1 3.5346 1.7703 0.0322 32 1 1.5616 2.4678 -1.2086 33 1 2.8395 1.0414 2.0530 34 1 3.6525 -0.1129 4.0696 35 1 4.9145 -1.4479 5.0749 36 1 3.3934 -1.0660 5.9169 37 1 5.3815 -1.2757 7.7238 38 1 7.6957 -3.0739 9.4191 39 1 6.8977 -1.4469 9.5416 40 1 7.2726 -4.1258 13.2759 41 1 7.4466 -6.7434 13.1781 42 1 5.6709 -5.4857 9.5828 43 1 4.3038 -1.8326 10.1939 44 1 4.0192 -3.6209 10.3421 45 1 1.1313 -2.6048 0.6460 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15608530_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:33 Heat of formation + Delta-G solvation = 42.162894 kcal Electronic energy + Delta-G solvation = -33258.510018 eV Core-core repulsion = 28442.917037 eV Total energy + Delta-G solvation = -4815.592981 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.135 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.27552 -43.05998 -41.84262 -41.11896 -39.97608 -39.12792 -37.57195 -37.15693 -35.23669 -33.56732 -32.91671 -32.42891 -30.31775 -30.08851 -27.62818 -27.27907 -26.90052 -26.20071 -24.18992 -22.89900 -22.55567 -22.38277 -21.79141 -21.07241 -20.52576 -19.48225 -19.31433 -18.66780 -18.38960 -18.29290 -18.18295 -17.75400 -17.57034 -17.23014 -16.57853 -16.39312 -16.29007 -16.02364 -15.79255 -15.67038 -15.40327 -15.22246 -14.93943 -14.79722 -14.29295 -14.20710 -14.04862 -13.92423 -13.85242 -13.73652 -13.37605 -13.28251 -12.67564 -12.45024 -12.40634 -12.22929 -12.18166 -12.11023 -11.88469 -11.76374 -11.11747 -10.98232 -10.83675 -10.79095 -10.56775 -10.42809 -9.97399 -9.43001 -5.34339 -1.17699 -0.43484 0.34174 0.49169 0.94560 0.99847 1.06840 1.24809 1.33857 1.64226 1.72978 1.88153 2.05731 2.31853 2.79184 2.93600 2.95014 3.04002 3.14904 3.20021 3.26687 3.32713 3.44484 3.49613 3.50007 3.53908 3.65027 3.78374 3.83155 4.05098 4.08505 4.10831 4.13219 4.15593 4.26487 4.37351 4.41528 4.53244 4.57015 4.62646 4.68417 4.81507 4.87239 5.06014 5.30536 5.37615 5.65609 5.83644 6.05839 6.22702 6.29556 6.86131 6.90382 7.19850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.066 4.066 3 Si 0.690 3.310 4 C -0.157 4.157 5 C -0.024 4.024 6 C -0.210 4.210 7 C 0.199 3.801 8 O -0.254 6.254 9 C 0.031 3.969 10 C 0.514 3.486 11 O -0.491 6.491 12 N -0.718 5.718 13 C 0.121 3.879 14 H 0.122 0.878 15 C -0.152 4.152 16 C 0.111 3.889 17 H 0.121 0.879 18 N -0.446 5.446 19 C -0.054 4.054 20 C -0.028 4.028 21 N -0.489 5.489 22 C 0.180 3.820 23 C -0.158 4.158 24 C -0.075 4.075 25 N 0.028 4.972 26 O -0.176 6.176 27 O -0.117 6.117 28 C 0.010 3.990 29 H 0.381 0.619 30 H 0.121 0.879 31 H -0.254 1.254 32 H -0.248 1.248 33 H 0.149 0.851 34 H 0.157 0.843 35 H 0.102 0.898 36 H 0.103 0.897 37 H 0.404 0.596 38 H 0.088 0.912 39 H 0.109 0.891 40 H 0.175 0.825 41 H 0.171 0.829 42 H 0.204 0.796 43 H 0.108 0.892 44 H 0.088 0.912 45 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.722 15.436 3.426 16.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.176 4.176 3 Si 0.591 3.409 4 C -0.159 4.159 5 C -0.041 4.041 6 C -0.229 4.229 7 C 0.150 3.850 8 O -0.163 6.163 9 C -0.048 4.048 10 C 0.298 3.702 11 O -0.362 6.362 12 N -0.372 5.372 13 C 0.016 3.984 14 H 0.140 0.860 15 C -0.191 4.191 16 C 0.006 3.994 17 H 0.139 0.861 18 N -0.130 5.130 19 C -0.186 4.186 20 C -0.175 4.175 21 N -0.207 5.207 22 C -0.102 4.102 23 C -0.197 4.197 24 C -0.159 4.159 25 N 0.548 4.452 26 O -0.385 6.385 27 O -0.341 6.341 28 C -0.009 4.009 29 H 0.228 0.772 30 H 0.138 0.862 31 H -0.179 1.179 32 H -0.172 1.172 33 H 0.166 0.834 34 H 0.174 0.826 35 H 0.120 0.880 36 H 0.121 0.879 37 H 0.239 0.761 38 H 0.107 0.893 39 H 0.127 0.873 40 H 0.193 0.807 41 H 0.188 0.812 42 H 0.220 0.780 43 H 0.127 0.873 44 H 0.107 0.893 45 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 3.068 14.613 2.055 15.073 hybrid contribution 0.315 0.621 0.233 0.734 sum 3.383 15.234 2.287 15.772 Atomic orbital electron populations 1.86571 1.16556 1.81612 1.49296 1.25104 0.85701 1.10278 0.96560 0.94990 0.80803 0.76944 0.88169 1.20321 1.02933 0.93480 0.99130 1.21249 0.91607 1.00044 0.91225 1.21262 1.07750 0.92053 1.01800 1.18681 0.89930 0.90867 0.85549 1.86506 1.66822 1.35545 1.27405 1.22719 0.98057 0.94330 0.89658 1.19894 0.78856 0.88596 0.82851 1.90885 1.51988 1.15702 1.77666 1.45711 1.57370 1.13261 1.20851 1.22826 0.94351 0.97084 0.84128 0.86016 1.23819 0.98554 1.03081 0.93627 1.22118 0.97511 0.81635 0.98179 0.86127 1.45294 1.45697 1.06740 1.15302 1.22755 1.06841 0.97358 0.91662 1.22404 1.05483 0.92647 0.97009 1.70376 1.15346 1.29216 1.05749 1.25142 1.04683 0.80515 0.99891 1.23969 0.96475 1.04800 0.94446 1.20599 1.12702 0.82567 1.00051 1.43336 0.99027 1.02417 1.00407 1.94561 1.39518 1.66204 1.38192 1.94697 1.51924 1.69123 1.18382 1.20855 0.92434 0.93913 0.93719 0.77156 0.86183 1.17870 1.17243 0.83368 0.82592 0.87986 0.87890 0.76118 0.89299 0.87289 0.80743 0.81158 0.78004 0.87321 0.89332 0.81827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.05 12.83 -35.23 -0.45 0.59 16 2 C -0.07 0.19 2.80 36.01 0.10 0.29 16 3 Si 0.69 -2.88 29.80 -169.99 -5.06 -7.94 16 4 C -0.16 0.41 5.35 -104.60 -0.56 -0.15 16 5 C -0.02 0.11 8.66 -39.60 -0.34 -0.23 16 6 C -0.21 0.88 9.04 -39.43 -0.36 0.52 16 7 C 0.20 -0.01 6.67 -39.22 -0.26 -0.28 16 8 O -0.25 -0.31 7.68 -49.79 -0.38 -0.70 16 9 C 0.03 -0.12 5.22 36.00 0.19 0.07 16 10 C 0.51 -0.53 7.91 -10.99 -0.09 -0.62 16 11 O -0.49 -2.33 16.12 -14.36 -0.23 -2.56 16 12 N -0.72 3.35 5.36 -53.02 -0.28 3.06 16 13 C 0.12 -0.42 3.71 -67.12 -0.25 -0.67 16 14 H 0.12 -0.12 5.00 -51.93 -0.26 -0.38 16 15 C -0.15 0.78 7.54 -25.92 -0.20 0.59 16 16 C 0.11 -0.44 4.88 -67.02 -0.33 -0.76 16 17 H 0.12 -0.69 8.14 -51.93 -0.42 -1.11 16 18 N -0.45 0.16 2.94 -110.49 -0.33 -0.16 16 19 C -0.05 -0.01 11.58 -16.56 -0.19 -0.20 16 20 C -0.03 -0.07 11.87 -17.81 -0.21 -0.29 16 21 N -0.49 -2.48 11.25 -14.67 -0.17 -2.64 16 22 C 0.18 0.39 11.19 -90.37 -1.01 -0.62 16 23 C -0.16 0.64 7.31 -25.83 -0.19 0.45 16 24 C -0.07 -0.17 6.87 -79.80 -0.55 -0.72 16 25 N 0.03 0.17 4.45 34.03 0.15 0.32 16 26 O -0.18 -1.24 18.45 -29.46 -0.54 -1.78 16 27 O -0.12 -0.96 17.24 -36.49 -0.63 -1.59 16 28 C 0.01 0.00 9.19 -39.61 -0.36 -0.36 16 29 H 0.38 -2.30 8.70 45.56 0.40 -1.90 16 30 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 31 H -0.25 0.56 7.11 56.52 0.40 0.96 16 32 H -0.25 0.08 7.11 56.52 0.40 0.48 16 33 H 0.15 -1.11 4.90 -52.48 -0.26 -1.37 16 34 H 0.16 -1.25 6.30 -52.49 -0.33 -1.58 16 35 H 0.10 -0.71 7.66 -51.93 -0.40 -1.11 16 36 H 0.10 -0.76 7.66 -51.93 -0.40 -1.15 16 37 H 0.40 -3.40 8.71 -40.82 -0.36 -3.76 16 38 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 39 H 0.11 -0.83 8.11 -51.93 -0.42 -1.25 16 40 H 0.18 -0.51 8.06 -52.49 -0.42 -0.93 16 41 H 0.17 0.12 8.06 -52.48 -0.42 -0.30 16 42 H 0.20 0.15 5.86 -52.49 -0.31 -0.16 16 43 H 0.11 -0.64 8.14 -51.93 -0.42 -1.06 16 44 H 0.09 -0.17 8.02 -51.93 -0.42 -0.58 16 45 H 0.16 0.03 7.61 -52.49 -0.40 -0.37 16 LS Contribution 387.15 15.07 5.83 5.83 Total: 0.00 -15.98 387.15 -11.57 -27.55 By element: Atomic # 1 Polarization: -12.14 SS G_CDS: -4.87 Total: -17.01 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -4.61 Total: -2.98 kcal Atomic # 7 Polarization: 1.21 SS G_CDS: -0.62 Total: 0.59 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -2.24 Total: -6.04 kcal Atomic # 14 Polarization: -2.88 SS G_CDS: -5.06 Total: -7.94 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -15.98 -11.57 -27.55 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.712 kcal (2) G-P(sol) polarization free energy of solvation -15.980 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.549 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds