Wall clock time and date at job start Sun Mar 7 2021 07:04:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.47304 * 2 1 4 4 C 1.50704 * 109.47430 * 119.99786 * 2 1 3 5 5 C 1.38244 * 119.97343 * 245.02714 * 4 2 1 6 6 C 1.38283 * 120.10851 * 180.02562 * 5 4 2 7 7 C 1.38122 * 120.05961 * 359.66937 * 6 5 4 8 8 C 1.38763 * 119.94152 * 0.60477 * 7 6 5 9 9 O 1.35897 * 120.05702 * 179.69745 * 8 7 6 10 10 C 1.42899 * 116.99793 * 359.72171 * 9 8 7 11 11 C 1.50702 * 109.46876 * 179.97438 * 10 9 8 12 12 O 1.21283 * 120.00262 * 0.02562 * 11 10 9 13 13 N 1.34777 * 119.99928 * 179.72354 * 11 10 9 14 14 C 1.46499 * 120.00199 * 180.27479 * 13 11 10 15 15 H 1.09003 * 112.84940 * 336.20268 * 14 13 11 16 16 C 1.53783 * 113.61254 * 107.50239 * 14 13 11 17 17 C 1.53779 * 87.07914 * 89.12073 * 16 14 13 18 18 H 1.09001 * 113.69235 * 270.87156 * 17 16 14 19 19 N 1.46500 * 113.61826 * 139.97871 * 17 16 14 20 20 C 1.36886 * 126.40096 * 142.49749 * 19 17 16 21 21 C 1.34665 * 106.81904 * 180.02562 * 20 19 17 22 22 N 1.34129 * 108.02254 * 0.02562 * 21 20 19 23 23 C 1.30498 * 109.25362 * 359.72006 * 22 21 20 24 24 C 1.53779 * 87.08398 * 25.43135 * 17 16 14 25 25 C 1.38168 * 119.96937 * 64.99826 * 4 2 1 26 26 H 0.96701 * 113.99650 * 299.99911 * 1 2 3 27 27 H 1.09003 * 109.47360 * 240.00319 * 2 1 3 28 28 H 1.48509 * 109.99812 * 300.00317 * 3 2 1 29 29 H 1.48500 * 110.00195 * 61.31721 * 3 2 1 30 30 H 1.08001 * 119.94576 * 359.97283 * 5 4 2 31 31 H 1.08008 * 119.96959 * 179.97438 * 6 5 4 32 32 H 1.07995 * 120.03322 * 180.32358 * 7 6 5 33 33 H 1.09004 * 109.47206 * 60.00256 * 10 9 8 34 34 H 1.08994 * 109.47548 * 299.99913 * 10 9 8 35 35 H 0.97000 * 120.00317 * 0.28382 * 13 11 10 36 36 H 1.09002 * 113.61447 * 203.66166 * 16 14 13 37 37 H 1.08996 * 113.61645 * 334.57335 * 16 14 13 38 38 H 1.07997 * 126.58559 * 0.04458 * 20 19 17 39 39 H 1.07998 * 125.98853 * 180.02562 * 21 20 19 40 40 H 1.07998 * 125.65290 * 180.28940 * 23 22 21 41 41 H 1.08997 * 113.61904 * 220.02064 * 24 17 16 42 42 H 1.09003 * 113.61234 * 89.11679 * 24 17 16 43 43 H 1.08002 * 120.02522 * 0.04973 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9315 -0.7104 1.2305 5 6 2.6384 -0.0115 2.1912 6 6 3.1011 -0.6606 3.3211 7 6 2.8521 -2.0079 3.4958 8 6 2.1477 -2.7129 2.5302 9 8 1.9067 -4.0399 2.6968 10 6 2.4131 -4.6468 3.8873 11 6 2.0512 -6.1097 3.8984 12 8 1.4221 -6.5858 2.9773 13 7 2.4319 -6.8903 4.9290 14 6 2.0854 -8.3136 4.9370 15 1 1.2136 -8.5405 4.3232 16 6 3.2839 -9.2409 4.6747 17 6 3.5201 -9.2354 6.1942 18 1 4.1702 -8.4289 6.5335 19 7 3.9061 -10.5419 6.7329 20 6 4.8121 -10.7729 7.7327 21 6 4.8633 -12.1066 7.9117 22 7 4.0122 -12.6747 7.0445 23 6 3.4312 -11.7432 6.3390 24 6 2.0219 -8.9244 6.3469 25 6 1.6846 -2.0595 1.3978 26 1 -0.3933 0.4417 0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5880 2.4586 1.2242 30 1 2.8303 1.0430 2.0586 31 1 3.6536 -0.1125 4.0701 32 1 3.2092 -2.5133 4.3809 33 1 1.9762 -4.1582 4.7583 34 1 3.4974 -4.5402 3.9166 35 1 2.9353 -6.5096 5.6657 36 1 3.0024 -10.2172 4.2802 37 1 4.0852 -8.7686 4.1065 38 1 5.3769 -10.0285 8.2741 39 1 5.4813 -12.6275 8.6280 40 1 2.6944 -11.9061 5.5664 41 1 1.8044 -8.1966 7.1286 42 1 1.3954 -9.8142 6.4095 43 1 1.1326 -2.6051 0.6467 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608530_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:44 Heat of formation + Delta-G solvation = 30.081112 kcal Electronic energy + Delta-G solvation = -26480.419336 eV Core-core repulsion = 22495.318885 eV Total energy + Delta-G solvation = -3985.100451 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.141 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.11909 -41.64940 -40.97094 -39.60849 -38.80435 -37.34323 -35.02222 -33.04172 -32.49111 -31.60457 -30.30782 -29.27951 -26.95962 -26.86718 -25.92335 -23.68939 -23.13884 -22.32178 -22.16598 -21.67086 -20.40429 -19.39480 -18.81217 -18.33375 -17.75341 -17.46189 -17.29256 -17.03670 -16.73453 -16.29390 -16.18335 -15.78996 -15.58480 -15.43139 -15.08739 -14.97952 -14.74392 -14.61454 -14.42675 -14.14759 -14.00380 -13.77117 -13.69363 -13.41289 -13.08502 -12.99900 -12.61515 -12.17184 -12.09831 -12.01035 -11.72523 -11.60023 -11.09932 -10.94757 -10.67069 -10.50965 -10.30764 -9.94565 -9.45357 -9.29089 -4.91442 0.20474 0.39122 1.09972 1.26200 1.36093 1.42408 1.60583 1.85816 1.96215 2.21612 2.52671 2.66302 3.15581 3.31179 3.40087 3.47025 3.62291 3.66227 3.73156 3.83968 3.85340 3.98363 4.00382 4.07711 4.12791 4.24735 4.35598 4.38821 4.42556 4.53658 4.54922 4.61588 4.64971 4.70746 4.80705 4.82850 4.87422 4.98166 5.23974 5.27842 5.36997 5.41446 5.45223 5.69040 5.83403 6.23978 6.28008 6.41186 6.45746 7.05562 7.15098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.095 4.095 3 Si 0.785 3.215 4 C -0.082 4.082 5 C -0.159 4.159 6 C -0.071 4.071 7 C -0.200 4.200 8 C 0.114 3.886 9 O -0.324 6.324 10 C 0.037 3.963 11 C 0.517 3.483 12 O -0.570 6.570 13 N -0.692 5.692 14 C 0.125 3.875 15 H 0.095 0.905 16 C -0.155 4.155 17 C 0.111 3.889 18 H 0.151 0.849 19 N -0.445 5.445 20 C -0.045 4.045 21 C -0.067 4.067 22 N -0.543 5.543 23 C 0.172 3.828 24 C -0.138 4.138 25 C -0.150 4.150 26 H 0.386 0.614 27 H 0.118 0.882 28 H -0.306 1.306 29 H -0.275 1.275 30 H 0.147 0.853 31 H 0.162 0.838 32 H 0.163 0.837 33 H 0.127 0.873 34 H 0.129 0.871 35 H 0.424 0.576 36 H 0.100 0.900 37 H 0.084 0.916 38 H 0.206 0.794 39 H 0.174 0.826 40 H 0.219 0.781 41 H 0.105 0.895 42 H 0.103 0.897 43 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.046 7.123 7.019 11.686 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.202 4.202 3 Si 0.689 3.311 4 C -0.082 4.082 5 C -0.177 4.177 6 C -0.088 4.088 7 C -0.219 4.219 8 C 0.069 3.931 9 O -0.237 6.237 10 C -0.041 4.041 11 C 0.304 3.696 12 O -0.447 6.447 13 N -0.347 5.347 14 C 0.019 3.981 15 H 0.113 0.887 16 C -0.194 4.194 17 C 0.009 3.991 18 H 0.169 0.831 19 N -0.127 5.127 20 C -0.178 4.178 21 C -0.214 4.214 22 N -0.262 5.262 23 C -0.110 4.110 24 C -0.177 4.177 25 C -0.169 4.169 26 H 0.235 0.765 27 H 0.136 0.864 28 H -0.235 1.235 29 H -0.201 1.201 30 H 0.164 0.836 31 H 0.180 0.820 32 H 0.181 0.819 33 H 0.145 0.855 34 H 0.147 0.853 35 H 0.263 0.737 36 H 0.119 0.881 37 H 0.103 0.897 38 H 0.223 0.777 39 H 0.191 0.809 40 H 0.236 0.764 41 H 0.124 0.876 42 H 0.121 0.879 43 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 5.202 6.448 5.570 9.983 hybrid contribution -0.945 0.256 0.640 1.170 sum 4.257 6.703 6.210 10.081 Atomic orbital electron populations 1.86588 1.18673 1.80556 1.50122 1.25459 0.83449 1.12849 0.98487 0.93860 0.90003 0.70792 0.76419 1.20108 0.98218 0.92984 0.96900 1.21251 1.00653 1.00830 0.94924 1.21334 0.96799 0.93613 0.97102 1.21643 1.03490 0.96285 1.00440 1.19172 0.96301 0.82296 0.95305 1.86122 1.74689 1.20829 1.42095 1.22749 1.02801 0.89882 0.88651 1.20567 0.78518 0.88580 0.81976 1.90790 1.40768 1.75981 1.37176 1.45298 1.57608 1.08314 1.23457 1.21575 0.98287 0.79834 0.98452 0.88729 1.23903 0.99217 1.01476 0.94832 1.23457 0.97746 0.83261 0.94643 0.83097 1.45723 1.31231 1.07910 1.27879 1.23234 0.99215 0.98943 0.96438 1.22678 1.03211 0.92633 1.02835 1.70270 1.12199 1.33923 1.09807 1.25231 1.03009 0.79816 1.02935 1.23776 0.94711 1.02561 0.96640 1.20308 1.04204 0.94565 0.97795 0.76451 0.86400 1.23477 1.20112 0.83594 0.82003 0.81937 0.85536 0.85307 0.73743 0.88122 0.89721 0.77723 0.80921 0.76429 0.87626 0.87890 0.87059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.65 12.83 -148.98 -1.91 -4.57 16 2 C -0.09 -0.09 2.80 71.24 0.20 0.11 16 3 Si 0.78 -2.00 29.88 68.60 2.05 0.05 16 4 C -0.08 -0.09 5.35 -19.88 -0.11 -0.20 16 5 C -0.16 0.52 8.67 22.28 0.19 0.71 16 6 C -0.07 0.42 10.04 22.25 0.22 0.64 16 7 C -0.20 0.97 9.04 22.37 0.20 1.17 16 8 C 0.11 0.27 6.69 22.51 0.15 0.42 16 9 O -0.32 -1.48 9.67 -73.35 -0.71 -2.19 16 10 C 0.04 -0.23 5.22 71.24 0.37 0.14 16 11 C 0.52 -0.57 7.91 87.66 0.69 0.12 16 12 O -0.57 -6.59 16.10 16.00 0.26 -6.33 16 13 N -0.69 6.67 5.26 -440.03 -2.32 4.36 16 14 C 0.12 -0.93 4.32 45.52 0.20 -0.73 16 15 H 0.09 -0.16 7.46 -2.39 -0.02 -0.18 16 16 C -0.15 1.21 7.43 31.12 0.23 1.44 16 17 C 0.11 -1.14 4.52 45.52 0.21 -0.94 16 18 H 0.15 -2.38 8.14 -2.39 -0.02 -2.40 16 19 N -0.45 1.40 2.94 -503.81 -1.48 -0.09 16 20 C -0.05 0.08 11.58 83.08 0.96 1.04 16 21 C -0.07 -0.32 11.87 83.52 0.99 0.67 16 22 N -0.54 -4.99 11.25 -200.31 -2.25 -7.24 16 23 C 0.17 0.35 11.36 180.26 2.05 2.40 16 24 C -0.14 1.50 7.51 31.12 0.23 1.73 16 25 C -0.15 -0.77 9.62 22.36 0.22 -0.56 16 26 H 0.39 -0.56 8.70 -74.06 -0.64 -1.20 16 27 H 0.12 0.06 7.96 -2.39 -0.02 0.04 16 28 H -0.31 -1.73 7.11 99.48 0.71 -1.03 16 29 H -0.27 0.04 7.01 99.48 0.70 0.74 16 30 H 0.15 -1.05 4.84 -2.91 -0.01 -1.06 16 31 H 0.16 -1.95 8.06 -2.91 -0.02 -1.98 16 32 H 0.16 -2.01 6.30 -2.91 -0.02 -2.03 16 33 H 0.13 -1.63 7.65 -2.38 -0.02 -1.64 16 34 H 0.13 -1.70 7.67 -2.39 -0.02 -1.72 16 35 H 0.42 -7.62 8.70 -92.71 -0.81 -8.43 16 36 H 0.10 -0.67 6.93 -2.39 -0.02 -0.69 16 37 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 38 H 0.21 -1.91 8.06 -2.91 -0.02 -1.93 16 39 H 0.17 0.31 8.06 -2.91 -0.02 0.29 16 40 H 0.22 -0.77 7.45 -2.91 -0.02 -0.79 16 41 H 0.11 -1.44 8.14 -2.39 -0.02 -1.46 16 42 H 0.10 -0.92 7.90 -2.39 -0.02 -0.94 16 43 H 0.11 0.97 8.06 -2.91 -0.02 0.95 16 Total: 0.00 -34.18 364.20 0.28 -33.89 By element: Atomic # 1 Polarization: -25.70 SS G_CDS: -0.36 Total: -26.07 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: 7.01 Total: 8.18 kcal Atomic # 7 Polarization: 3.08 SS G_CDS: -6.05 Total: -2.97 kcal Atomic # 8 Polarization: -10.72 SS G_CDS: -2.36 Total: -13.08 kcal Atomic # 14 Polarization: -2.00 SS G_CDS: 2.05 Total: 0.05 kcal Total: -34.18 0.28 -33.89 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.973 kcal (2) G-P(sol) polarization free energy of solvation -34.175 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.892 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.081 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds