Wall clock time and date at job start Sun Mar 7 2021 07:04:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 117.00014 * 2 1 4 4 C 1.38610 * 120.02713 * 179.97438 * 3 2 1 5 5 C 1.38656 * 119.88983 * 179.97438 * 4 3 2 6 6 O 1.35905 * 120.02345 * 180.02562 * 5 4 3 7 7 C 1.42891 * 117.00240 * 0.02562 * 6 5 4 8 8 C 1.50706 * 109.47345 * 180.02562 * 7 6 5 9 9 O 1.21280 * 119.99401 * 359.97438 * 8 7 6 10 10 N 1.34770 * 120.00125 * 180.02562 * 8 7 6 11 11 C 1.46497 * 119.99944 * 179.97438 * 10 8 7 12 12 H 1.09004 * 112.85061 * 334.66213 * 11 10 8 13 13 C 1.53777 * 113.61973 * 105.86155 * 11 10 8 14 14 C 1.54045 * 86.98495 * 89.16006 * 13 11 10 15 15 H 1.08997 * 113.61625 * 270.88642 * 14 13 11 16 16 N 1.46502 * 113.69340 * 139.99543 * 14 13 11 17 17 C 1.36885 * 126.40161 * 142.46689 * 16 14 13 18 18 C 1.34670 * 106.81865 * 179.97438 * 17 16 14 19 19 N 1.34119 * 108.02234 * 0.02562 * 18 17 16 20 20 C 1.30504 * 109.25490 * 359.72153 * 19 18 17 21 21 C 1.53771 * 87.07989 * 25.43688 * 14 13 11 22 22 C 1.38742 * 119.94523 * 0.28057 * 5 4 3 23 23 C 1.50707 * 119.97151 * 179.69876 * 22 5 4 24 24 O 1.42893 * 109.46986 * 284.99672 * 23 22 5 25 25 Si 1.86300 * 109.47035 * 164.99763 * 23 22 5 26 26 C 1.38201 * 120.05598 * 359.42000 * 22 5 4 27 27 C 1.38151 * 120.10642 * 0.59789 * 26 22 5 28 28 H 1.09000 * 109.46944 * 300.00547 * 1 2 3 29 29 H 1.09005 * 109.46889 * 60.00269 * 1 2 3 30 30 H 1.08996 * 109.46972 * 179.97438 * 1 2 3 31 31 H 1.08006 * 120.05525 * 359.95639 * 4 3 2 32 32 H 1.09002 * 109.47220 * 299.99819 * 7 6 5 33 33 H 1.08996 * 109.47672 * 59.99762 * 7 6 5 34 34 H 0.97000 * 120.00241 * 359.97438 * 10 8 7 35 35 H 1.09001 * 113.61664 * 203.66986 * 13 11 10 36 36 H 1.09006 * 113.61036 * 334.56508 * 13 11 10 37 37 H 1.08000 * 126.58768 * 359.96995 * 17 16 14 38 38 H 1.07996 * 125.98610 * 180.02562 * 18 17 16 39 39 H 1.08003 * 125.64652 * 180.28767 * 20 19 18 40 40 H 1.09001 * 113.61394 * 220.02443 * 21 14 13 41 41 H 1.08998 * 113.61662 * 89.11368 * 21 14 13 42 42 H 1.08998 * 109.46908 * 45.00077 * 23 22 5 43 43 H 0.96701 * 113.99962 * 179.97438 * 24 23 22 44 44 H 1.48500 * 109.99861 * 59.99976 * 25 23 22 45 45 H 1.48496 * 110.00084 * 181.31765 * 25 23 22 46 46 H 1.07993 * 119.94622 * 180.30612 * 26 22 5 47 47 H 1.07996 * 119.97456 * 179.70030 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2841 0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4137 2.5960 0.0000 7 6 6.1316 1.3605 0.0000 8 6 7.6125 1.6401 0.0006 9 8 8.0135 2.7847 0.0006 10 7 8.4912 0.6182 0.0002 11 6 9.9308 0.8900 0.0003 12 1 10.1783 1.8608 -0.4293 13 6 10.6077 0.6254 1.3554 14 6 10.8266 -0.8207 0.8718 15 1 10.0005 -1.4906 1.1100 16 7 12.1321 -1.3737 1.2410 17 6 12.3896 -2.6626 1.6234 18 6 13.7113 -2.7392 1.8699 19 7 14.2462 -1.5300 1.6448 20 6 13.3071 -0.7084 1.2624 21 6 10.7759 -0.2656 -0.5613 22 6 3.2972 3.6821 0.0048 23 6 3.9775 5.0268 0.0111 24 8 4.5030 5.2886 1.3138 25 14 2.7442 6.3489 -0.4383 26 6 1.9172 3.6065 -0.0020 27 6 1.2906 2.3753 -0.0011 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0276 -0.0005 31 1 4.0197 0.3791 0.0017 32 1 5.8700 0.7882 0.8900 33 1 5.8700 0.7881 -0.8899 34 1 8.1705 -0.2973 -0.0001 35 1 11.5333 1.1832 1.4975 36 1 9.9296 0.7052 2.2052 37 1 11.6709 -3.4639 1.7107 38 1 14.2467 -3.6199 2.1923 39 1 13.4463 0.3318 1.0076 40 1 10.2335 -0.9046 -1.2582 41 1 11.7474 0.0491 -0.9424 42 1 4.7903 5.0262 -0.7152 43 1 4.9562 6.1394 1.3915 44 1 1.6309 6.3600 0.5444 45 1 3.4099 7.6760 -0.4667 46 1 1.3278 4.5114 -0.0032 47 1 0.2121 2.3188 -0.0015 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15608530_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:53 Heat of formation + Delta-G solvation = 1.169379 kcal Electronic energy + Delta-G solvation = -31279.158891 eV Core-core repulsion = 26818.584922 eV Total energy + Delta-G solvation = -4460.573969 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.15474 -41.86276 -41.26234 -40.16862 -39.29465 -38.12835 -37.01140 -35.06438 -33.05951 -32.38239 -31.44072 -30.31205 -29.51941 -28.52377 -27.23651 -26.16312 -26.03112 -23.90692 -22.64278 -22.36516 -22.21223 -21.86497 -20.55411 -19.93609 -18.92234 -18.40751 -18.38380 -17.82368 -17.52346 -17.39091 -17.05785 -16.85129 -16.76354 -16.32740 -16.01346 -15.62500 -15.54999 -15.48281 -15.22342 -15.08169 -14.82085 -14.62121 -14.47632 -14.01378 -13.94254 -13.85486 -13.74633 -13.56939 -13.41948 -13.27595 -13.22654 -12.64414 -12.45839 -12.33535 -11.98270 -11.96324 -11.72780 -11.59850 -11.06122 -10.87995 -10.53665 -10.43388 -10.28583 -9.70447 -9.43956 -9.08208 -4.92808 0.21554 0.32731 1.07238 1.24086 1.31873 1.35349 1.62567 1.73619 1.98150 2.12424 2.29702 2.40735 2.55505 2.88287 3.06485 3.27753 3.38942 3.41931 3.50378 3.66340 3.73239 3.77944 3.82118 3.83818 3.93572 3.98481 4.06602 4.14015 4.17313 4.19058 4.26663 4.27370 4.34718 4.36006 4.44981 4.51350 4.54050 4.57896 4.61242 4.64373 4.79199 5.01744 5.13418 5.22207 5.31209 5.32691 5.44243 5.82635 6.01314 6.16010 6.22152 6.31699 6.62573 6.91241 7.17756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.191 3.809 6 O -0.274 6.274 7 C 0.037 3.963 8 C 0.522 3.478 9 O -0.503 6.503 10 N -0.715 5.715 11 C 0.128 3.872 12 H 0.118 0.882 13 C -0.156 4.156 14 C 0.107 3.893 15 H 0.122 0.878 16 N -0.450 5.450 17 C -0.058 4.058 18 C -0.029 4.029 19 N -0.493 5.493 20 C 0.182 3.818 21 C -0.150 4.150 22 C -0.135 4.135 23 C -0.060 4.060 24 O -0.531 6.531 25 Si 0.682 3.318 26 C -0.037 4.037 27 C -0.238 4.238 28 H 0.059 0.941 29 H 0.060 0.940 30 H 0.103 0.897 31 H 0.138 0.862 32 H 0.097 0.903 33 H 0.098 0.902 34 H 0.403 0.597 35 H 0.105 0.895 36 H 0.087 0.913 37 H 0.173 0.827 38 H 0.170 0.830 39 H 0.202 0.798 40 H 0.089 0.911 41 H 0.108 0.892 42 H 0.076 0.924 43 H 0.377 0.623 44 H -0.256 1.256 45 H -0.261 1.261 46 H 0.138 0.862 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.051 -3.634 -3.734 7.986 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.266 4.266 5 C 0.144 3.856 6 O -0.185 6.185 7 C -0.042 4.042 8 C 0.306 3.694 9 O -0.376 6.376 10 N -0.369 5.369 11 C 0.022 3.978 12 H 0.136 0.864 13 C -0.195 4.195 14 C 0.004 3.996 15 H 0.140 0.860 16 N -0.133 5.133 17 C -0.190 4.190 18 C -0.177 4.177 19 N -0.211 5.211 20 C -0.100 4.100 21 C -0.189 4.189 22 C -0.136 4.136 23 C -0.170 4.170 24 O -0.338 6.338 25 Si 0.584 3.416 26 C -0.055 4.055 27 C -0.257 4.257 28 H 0.077 0.923 29 H 0.079 0.921 30 H 0.121 0.879 31 H 0.156 0.844 32 H 0.115 0.885 33 H 0.116 0.884 34 H 0.238 0.762 35 H 0.123 0.877 36 H 0.106 0.894 37 H 0.190 0.810 38 H 0.187 0.813 39 H 0.219 0.781 40 H 0.107 0.893 41 H 0.127 0.873 42 H 0.094 0.906 43 H 0.225 0.775 44 H -0.181 1.181 45 H -0.186 1.186 46 H 0.156 0.844 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.526 -2.396 -3.306 6.871 hybrid contribution -0.475 -0.661 0.816 1.153 sum -6.001 -3.058 -2.490 7.181 Atomic orbital electron populations 1.23151 0.77583 1.04412 1.01824 1.86070 1.22039 1.26641 1.88027 1.18675 0.91442 0.84393 0.92717 1.20343 0.92947 0.97170 1.16162 1.18362 0.81777 0.92492 0.92954 1.86227 1.14916 1.29431 1.87945 1.22487 0.89910 0.87346 1.04416 1.20033 0.87382 0.85489 0.76452 1.90801 1.79686 1.20785 1.46329 1.45484 1.05383 1.09344 1.76678 1.21643 0.79155 1.00553 0.96407 0.86397 1.23979 1.02621 0.93906 0.99005 1.23238 0.84080 0.95636 0.96686 0.85990 1.45560 1.08374 1.09584 1.49766 1.22781 0.99207 0.87566 1.09480 1.22373 0.91795 0.96673 1.06829 1.70346 1.31303 1.01858 1.17551 1.24900 0.80093 1.00050 1.04991 1.23854 1.01970 0.97211 0.95868 1.18461 0.92263 0.92094 1.10821 1.24555 1.04006 1.00349 0.88096 1.86602 1.75843 1.41685 1.29702 0.95289 0.79682 0.77245 0.89400 1.20727 0.92551 0.97907 0.94295 1.21114 1.00499 0.91671 1.12369 0.92272 0.92134 0.87886 0.84404 0.88537 0.88396 0.76174 0.87686 0.89434 0.80954 0.81305 0.78138 0.89284 0.87319 0.90590 0.77531 1.18065 1.18611 0.84418 0.84656 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.23 10.49 -19.44 -0.20 -0.44 16 3 C 0.17 0.21 6.68 -39.24 -0.26 -0.05 16 4 C -0.25 -0.25 8.97 -39.29 -0.35 -0.60 16 5 C 0.19 0.45 6.66 -39.24 -0.26 0.19 16 6 O -0.27 -0.74 8.99 -39.35 -0.35 -1.09 16 7 C 0.04 -0.05 5.22 36.01 0.19 0.13 16 8 C 0.52 -0.02 7.91 -10.99 -0.09 -0.10 16 9 O -0.50 -2.46 16.12 -14.35 -0.23 -2.69 16 10 N -0.71 2.60 5.26 -53.02 -0.28 2.32 16 11 C 0.13 -0.42 4.29 -67.12 -0.29 -0.71 16 12 H 0.12 -0.18 7.50 -51.93 -0.39 -0.57 16 13 C -0.16 0.50 7.45 -25.78 -0.19 0.31 16 14 C 0.11 -0.40 4.53 -66.98 -0.30 -0.70 16 15 H 0.12 -0.65 8.14 -51.93 -0.42 -1.08 16 16 N -0.45 0.31 2.95 -110.45 -0.33 -0.02 16 17 C -0.06 -0.01 11.58 -16.56 -0.19 -0.20 16 18 C -0.03 -0.07 11.87 -17.82 -0.21 -0.28 16 19 N -0.49 -2.09 11.25 -14.67 -0.17 -2.26 16 20 C 0.18 0.20 11.37 -90.37 -1.03 -0.83 16 21 C -0.15 0.67 7.50 -25.92 -0.19 0.47 16 22 C -0.14 -0.33 5.31 -104.45 -0.55 -0.88 16 23 C -0.06 -0.12 2.37 36.01 0.09 -0.03 16 24 O -0.53 -1.87 12.86 -35.23 -0.45 -2.32 16 25 Si 0.68 -0.01 30.18 -169.99 -5.13 -5.14 16 26 C -0.04 -0.04 8.65 -39.63 -0.34 -0.38 16 27 C -0.24 -0.10 9.04 -39.41 -0.36 -0.46 16 28 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 29 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 30 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 31 H 0.14 -0.18 6.30 -52.48 -0.33 -0.51 16 32 H 0.10 -0.34 7.66 -51.93 -0.40 -0.74 16 33 H 0.10 -0.41 7.66 -51.93 -0.40 -0.80 16 34 H 0.40 -2.73 8.70 -40.82 -0.36 -3.09 16 35 H 0.10 -0.34 6.95 -51.93 -0.36 -0.70 16 36 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.17 -0.48 8.06 -52.49 -0.42 -0.91 16 38 H 0.17 0.09 8.06 -52.49 -0.42 -0.33 16 39 H 0.20 -0.38 7.46 -52.48 -0.39 -0.77 16 40 H 0.09 -0.46 8.14 -51.93 -0.42 -0.88 16 41 H 0.11 -0.44 7.89 -51.93 -0.41 -0.85 16 42 H 0.08 0.14 7.82 -51.93 -0.41 -0.27 16 43 H 0.38 -0.07 8.74 45.56 0.40 0.33 16 44 H -0.26 -0.57 6.75 56.52 0.38 -0.18 16 45 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 46 H 0.14 -0.08 4.88 -52.49 -0.26 -0.33 16 47 H 0.14 -0.25 6.29 -52.49 -0.33 -0.58 16 LS Contribution 393.05 15.07 5.92 5.92 Total: 0.00 -13.23 393.05 -10.76 -23.98 By element: Atomic # 1 Polarization: -8.90 SS G_CDS: -6.18 Total: -15.08 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -3.36 Total: -3.20 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -0.77 Total: 0.05 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -1.24 Total: -6.54 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.13 Total: -5.14 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -13.23 -10.76 -23.98 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.152 kcal (2) G-P(sol) polarization free energy of solvation -13.226 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.927 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.757 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.983 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds