Wall clock time and date at job start Sun Mar 7 2021 07:04:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 117.00014 * 2 1 4 4 C 1.38610 * 120.02713 * 179.97438 * 3 2 1 5 5 C 1.38656 * 119.88983 * 179.97438 * 4 3 2 6 6 O 1.35905 * 120.02345 * 180.02562 * 5 4 3 7 7 C 1.42891 * 117.00240 * 0.02562 * 6 5 4 8 8 C 1.50706 * 109.47345 * 180.02562 * 7 6 5 9 9 O 1.21280 * 119.99401 * 359.97438 * 8 7 6 10 10 N 1.34770 * 120.00125 * 180.02562 * 8 7 6 11 11 C 1.46497 * 119.99944 * 179.97438 * 10 8 7 12 12 H 1.09004 * 112.85061 * 334.66213 * 11 10 8 13 13 C 1.53777 * 113.61973 * 105.86155 * 11 10 8 14 14 C 1.54045 * 86.98495 * 89.16006 * 13 11 10 15 15 H 1.08997 * 113.61625 * 270.88642 * 14 13 11 16 16 N 1.46502 * 113.69340 * 139.99543 * 14 13 11 17 17 C 1.36885 * 126.40161 * 142.46689 * 16 14 13 18 18 C 1.34670 * 106.81865 * 179.97438 * 17 16 14 19 19 N 1.34119 * 108.02234 * 0.02562 * 18 17 16 20 20 C 1.30504 * 109.25490 * 359.72153 * 19 18 17 21 21 C 1.53771 * 87.07989 * 25.43688 * 14 13 11 22 22 C 1.38742 * 119.94523 * 0.28057 * 5 4 3 23 23 C 1.50707 * 119.97151 * 179.69876 * 22 5 4 24 24 O 1.42893 * 109.46986 * 284.99672 * 23 22 5 25 25 Si 1.86300 * 109.47035 * 164.99763 * 23 22 5 26 26 C 1.38201 * 120.05598 * 359.42000 * 22 5 4 27 27 C 1.38151 * 120.10642 * 0.59789 * 26 22 5 28 28 H 1.09000 * 109.46944 * 300.00547 * 1 2 3 29 29 H 1.09005 * 109.46889 * 60.00269 * 1 2 3 30 30 H 1.08996 * 109.46972 * 179.97438 * 1 2 3 31 31 H 1.08006 * 120.05525 * 359.95639 * 4 3 2 32 32 H 1.09002 * 109.47220 * 299.99819 * 7 6 5 33 33 H 1.08996 * 109.47672 * 59.99762 * 7 6 5 34 34 H 0.97000 * 120.00241 * 359.97438 * 10 8 7 35 35 H 1.09001 * 113.61664 * 203.66986 * 13 11 10 36 36 H 1.09006 * 113.61036 * 334.56508 * 13 11 10 37 37 H 1.08000 * 126.58768 * 359.96995 * 17 16 14 38 38 H 1.07996 * 125.98610 * 180.02562 * 18 17 16 39 39 H 1.08003 * 125.64652 * 180.28767 * 20 19 18 40 40 H 1.09001 * 113.61394 * 220.02443 * 21 14 13 41 41 H 1.08998 * 113.61662 * 89.11368 * 21 14 13 42 42 H 1.08998 * 109.46908 * 45.00077 * 23 22 5 43 43 H 0.96701 * 113.99962 * 179.97438 * 24 23 22 44 44 H 1.48500 * 109.99861 * 59.99976 * 25 23 22 45 45 H 1.48496 * 110.00084 * 181.31765 * 25 23 22 46 46 H 1.07993 * 119.94622 * 180.30612 * 26 22 5 47 47 H 1.07996 * 119.97456 * 179.70030 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2841 0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4137 2.5960 0.0000 7 6 6.1316 1.3605 0.0000 8 6 7.6125 1.6401 0.0006 9 8 8.0135 2.7847 0.0006 10 7 8.4912 0.6182 0.0002 11 6 9.9308 0.8900 0.0003 12 1 10.1783 1.8608 -0.4293 13 6 10.6077 0.6254 1.3554 14 6 10.8266 -0.8207 0.8718 15 1 10.0005 -1.4906 1.1100 16 7 12.1321 -1.3737 1.2410 17 6 12.3896 -2.6626 1.6234 18 6 13.7113 -2.7392 1.8699 19 7 14.2462 -1.5300 1.6448 20 6 13.3071 -0.7084 1.2624 21 6 10.7759 -0.2656 -0.5613 22 6 3.2972 3.6821 0.0048 23 6 3.9775 5.0268 0.0111 24 8 4.5030 5.2886 1.3138 25 14 2.7442 6.3489 -0.4383 26 6 1.9172 3.6065 -0.0020 27 6 1.2906 2.3753 -0.0011 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0276 -0.0005 31 1 4.0197 0.3791 0.0017 32 1 5.8700 0.7882 0.8900 33 1 5.8700 0.7881 -0.8899 34 1 8.1705 -0.2973 -0.0001 35 1 11.5333 1.1832 1.4975 36 1 9.9296 0.7052 2.2052 37 1 11.6709 -3.4639 1.7107 38 1 14.2467 -3.6199 2.1923 39 1 13.4463 0.3318 1.0076 40 1 10.2335 -0.9046 -1.2582 41 1 11.7474 0.0491 -0.9424 42 1 4.7903 5.0262 -0.7152 43 1 4.9562 6.1394 1.3915 44 1 1.6309 6.3600 0.5444 45 1 3.4099 7.6760 -0.4667 46 1 1.3278 4.5114 -0.0032 47 1 0.2121 2.3188 -0.0015 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608530_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:52 Heat of formation + Delta-G solvation = -1.999253 kcal Electronic energy + Delta-G solvation = -31279.296293 eV Core-core repulsion = 26818.584922 eV Total energy + Delta-G solvation = -4460.711371 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.12268 -41.85183 -41.19288 -40.10209 -39.25523 -38.21051 -37.09500 -35.01345 -33.03555 -32.39384 -31.42446 -30.32234 -29.44632 -28.36174 -26.96510 -26.07897 -26.00294 -23.88394 -22.59772 -22.37845 -22.17929 -21.82570 -20.42702 -19.89513 -18.80178 -18.56509 -18.33923 -17.76782 -17.46724 -17.31913 -16.93594 -16.86209 -16.65436 -16.25891 -15.92692 -15.64694 -15.55257 -15.40954 -15.24371 -15.05854 -14.78781 -14.61145 -14.41418 -14.03290 -13.80768 -13.77780 -13.69393 -13.51268 -13.38109 -13.20974 -13.06865 -12.51421 -12.42647 -12.16790 -11.99853 -11.75941 -11.72164 -11.61366 -11.10015 -10.95663 -10.51624 -10.41236 -10.30402 -9.70846 -9.46220 -9.11038 -4.94900 0.18612 0.29650 1.09236 1.30135 1.35869 1.36496 1.58226 1.84987 1.90925 2.20828 2.23017 2.51023 2.53536 3.14252 3.30905 3.46003 3.47682 3.61679 3.71228 3.72652 3.84663 3.87511 3.95748 3.97493 4.04106 4.05564 4.18516 4.30297 4.36265 4.38561 4.42054 4.42364 4.45646 4.54425 4.60558 4.61047 4.70215 4.79105 4.79858 4.81990 4.87187 4.99736 5.22101 5.27145 5.29502 5.40745 5.45290 5.82419 6.09958 6.27257 6.32543 6.38636 6.59446 7.04694 7.14206 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.164 3.836 4 C -0.250 4.250 5 C 0.177 3.823 6 O -0.302 6.302 7 C 0.032 3.968 8 C 0.521 3.479 9 O -0.563 6.563 10 N -0.694 5.694 11 C 0.127 3.873 12 H 0.097 0.903 13 C -0.156 4.156 14 C 0.110 3.890 15 H 0.148 0.852 16 N -0.445 5.445 17 C -0.046 4.046 18 C -0.066 4.066 19 N -0.542 5.542 20 C 0.173 3.827 21 C -0.136 4.136 22 C -0.161 4.161 23 C -0.079 4.079 24 O -0.557 6.557 25 Si 0.776 3.224 26 C -0.043 4.043 27 C -0.239 4.239 28 H 0.064 0.936 29 H 0.071 0.929 30 H 0.118 0.882 31 H 0.159 0.841 32 H 0.120 0.880 33 H 0.128 0.872 34 H 0.423 0.577 35 H 0.102 0.898 36 H 0.081 0.919 37 H 0.205 0.795 38 H 0.174 0.826 39 H 0.220 0.780 40 H 0.106 0.894 41 H 0.105 0.895 42 H 0.069 0.931 43 H 0.388 0.612 44 H -0.282 1.282 45 H -0.291 1.291 46 H 0.150 0.850 47 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.973 -5.288 -4.342 10.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.118 3.882 4 C -0.269 4.269 5 C 0.131 3.869 6 O -0.214 6.214 7 C -0.046 4.046 8 C 0.307 3.693 9 O -0.440 6.440 10 N -0.348 5.348 11 C 0.021 3.979 12 H 0.115 0.885 13 C -0.195 4.195 14 C 0.008 3.992 15 H 0.166 0.834 16 N -0.127 5.127 17 C -0.180 4.180 18 C -0.213 4.213 19 N -0.261 5.261 20 C -0.109 4.109 21 C -0.175 4.175 22 C -0.162 4.162 23 C -0.186 4.186 24 O -0.366 6.366 25 Si 0.680 3.320 26 C -0.060 4.060 27 C -0.257 4.257 28 H 0.083 0.917 29 H 0.089 0.911 30 H 0.136 0.864 31 H 0.176 0.824 32 H 0.137 0.863 33 H 0.146 0.854 34 H 0.261 0.739 35 H 0.120 0.880 36 H 0.099 0.901 37 H 0.221 0.779 38 H 0.191 0.809 39 H 0.237 0.763 40 H 0.124 0.876 41 H 0.123 0.877 42 H 0.087 0.913 43 H 0.237 0.763 44 H -0.209 1.209 45 H -0.218 1.218 46 H 0.167 0.833 47 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -7.446 -4.125 -3.924 9.373 hybrid contribution 0.132 -0.199 1.031 1.058 sum -7.314 -4.324 -2.893 8.976 Atomic orbital electron populations 1.23405 0.76050 1.05737 1.02641 1.86051 1.23701 1.26399 1.87934 1.18858 0.91750 0.84880 0.92709 1.20556 0.93319 0.97419 1.15595 1.18519 0.81805 0.93054 0.93516 1.86185 1.15308 1.31771 1.88178 1.22771 0.88401 0.86538 1.06860 1.20395 0.88359 0.85131 0.75425 1.90779 1.80618 1.23179 1.49438 1.45309 1.04877 1.09693 1.74938 1.21574 0.79400 1.00316 0.96654 0.88476 1.23956 1.02368 0.94548 0.98635 1.23499 0.83359 0.95513 0.96870 0.83394 1.45716 1.08876 1.09279 1.48851 1.23226 0.98904 0.88317 1.07507 1.22675 0.93259 0.96675 1.08685 1.70270 1.33331 1.03172 1.19365 1.25246 0.80415 1.00662 1.04602 1.23762 1.01595 0.96398 0.95732 1.18738 0.93100 0.92421 1.11905 1.24932 1.04673 1.01722 0.87279 1.86554 1.76369 1.42861 1.30816 0.94200 0.76658 0.73719 0.87468 1.20890 0.92144 0.98767 0.94228 1.21379 1.01645 0.91207 1.11483 0.91691 0.91060 0.86415 0.82385 0.86279 0.85424 0.73890 0.87996 0.90066 0.77864 0.80888 0.76336 0.87587 0.87665 0.91297 0.76288 1.20906 1.21850 0.83277 0.82542 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.10 10.49 -92.47 -0.97 -1.07 16 3 C 0.16 0.29 6.68 22.49 0.15 0.44 16 4 C -0.25 -0.39 8.97 22.46 0.20 -0.18 16 5 C 0.18 0.94 6.66 22.49 0.15 1.09 16 6 O -0.30 -1.93 8.99 -73.44 -0.66 -2.59 16 7 C 0.03 -0.11 5.22 71.24 0.37 0.26 16 8 C 0.52 0.16 7.91 87.66 0.69 0.85 16 9 O -0.56 -6.64 16.12 16.01 0.26 -6.38 16 10 N -0.69 5.64 5.26 -440.04 -2.32 3.33 16 11 C 0.13 -0.84 4.29 45.52 0.20 -0.65 16 12 H 0.10 -0.16 7.50 -2.38 -0.02 -0.17 16 13 C -0.16 1.03 7.45 31.21 0.23 1.26 16 14 C 0.11 -1.00 4.53 45.60 0.21 -0.79 16 15 H 0.15 -2.07 8.14 -2.39 -0.02 -2.09 16 16 N -0.45 0.98 2.95 -503.34 -1.48 -0.50 16 17 C -0.05 0.03 11.58 83.09 0.96 1.00 16 18 C -0.07 -0.36 11.87 83.53 0.99 0.63 16 19 N -0.54 -5.28 11.25 -200.32 -2.25 -7.54 16 20 C 0.17 0.46 11.37 180.26 2.05 2.50 16 21 C -0.14 1.39 7.50 31.12 0.23 1.62 16 22 C -0.16 -0.92 5.31 -19.75 -0.10 -1.03 16 23 C -0.08 -0.42 2.37 71.24 0.17 -0.26 16 24 O -0.56 -4.98 12.86 -148.98 -1.92 -6.90 16 25 Si 0.78 0.38 30.18 68.60 2.07 2.45 16 26 C -0.04 -0.09 8.65 22.24 0.19 0.11 16 27 C -0.24 -0.04 9.04 22.38 0.20 0.16 16 28 H 0.06 -0.49 7.66 -2.39 -0.02 -0.51 16 29 H 0.07 -0.61 7.66 -2.38 -0.02 -0.63 16 30 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 31 H 0.16 -0.64 6.30 -2.91 -0.02 -0.66 16 32 H 0.12 -0.99 7.66 -2.39 -0.02 -1.01 16 33 H 0.13 -1.26 7.66 -2.39 -0.02 -1.27 16 34 H 0.42 -6.70 8.70 -92.71 -0.81 -7.51 16 35 H 0.10 -0.59 6.95 -2.39 -0.02 -0.61 16 36 H 0.08 -0.40 8.14 -2.38 -0.02 -0.42 16 37 H 0.20 -1.64 8.06 -2.91 -0.02 -1.66 16 38 H 0.17 0.43 8.06 -2.91 -0.02 0.41 16 39 H 0.22 -0.68 7.46 -2.91 -0.02 -0.71 16 40 H 0.11 -1.37 8.14 -2.39 -0.02 -1.39 16 41 H 0.10 -0.92 7.89 -2.39 -0.02 -0.93 16 42 H 0.07 0.40 7.82 -2.39 -0.02 0.38 16 43 H 0.39 0.67 8.74 -74.06 -0.65 0.02 16 44 H -0.28 -1.33 6.75 99.48 0.67 -0.65 16 45 H -0.29 -1.52 7.11 99.48 0.71 -0.81 16 46 H 0.15 -0.19 4.88 -2.91 -0.01 -0.21 16 47 H 0.16 -0.79 6.29 -2.91 -0.02 -0.81 16 Total: 0.00 -33.91 393.05 0.32 -33.59 By element: Atomic # 1 Polarization: -21.99 SS G_CDS: -0.42 Total: -22.41 kcal Atomic # 6 Polarization: 0.02 SS G_CDS: 8.01 Total: 8.03 kcal Atomic # 7 Polarization: 1.34 SS G_CDS: -6.05 Total: -4.71 kcal Atomic # 8 Polarization: -13.66 SS G_CDS: -3.29 Total: -16.95 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: 2.07 Total: 2.45 kcal Total: -33.91 0.32 -33.59 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.587 kcal (2) G-P(sol) polarization free energy of solvation -33.906 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.320 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.586 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds