Wall clock time and date at job start Sun Mar 7 2021 07:05:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46900 * 110.99690 * 2 1 4 4 C 1.50698 * 109.47179 * 293.95068 * 3 2 1 5 5 O 1.21288 * 120.00286 * 0.02562 * 4 3 2 6 6 N 1.34783 * 120.00207 * 179.97438 * 4 3 2 7 7 C 1.46501 * 120.00023 * 180.02562 * 6 4 3 8 8 H 1.08998 * 112.85210 * 23.80318 * 7 6 4 9 9 C 1.53781 * 113.61166 * 155.00423 * 7 6 4 10 10 C 1.53782 * 87.08118 * 89.19900 * 9 7 6 11 11 H 1.09000 * 113.61420 * 270.79681 * 10 9 7 12 12 N 1.46498 * 113.61565 * 139.97967 * 10 9 7 13 13 C 1.36881 * 126.39751 * 119.99636 * 12 10 9 14 14 C 1.34668 * 106.81875 * 180.02562 * 13 12 10 15 15 N 1.34134 * 108.01972 * 359.97438 * 14 13 12 16 16 C 1.30501 * 109.25535 * 0.02562 * 15 14 13 17 17 C 1.53784 * 87.08343 * 25.43116 * 10 9 7 18 18 C 1.39672 * 110.99699 * 123.95152 * 2 1 3 19 19 C 1.38898 * 120.06883 * 115.77261 * 18 2 1 20 20 C 1.50691 * 120.03950 * 0.02562 * 19 18 2 21 21 O 1.42899 * 109.47204 * 284.99789 * 20 19 18 22 22 Si 1.86303 * 109.47253 * 165.00084 * 20 19 18 23 23 C 1.38127 * 119.91953 * 179.74246 * 19 18 2 24 24 C 1.38268 * 120.07541 * 0.53421 * 23 19 18 25 25 C 1.50700 * 119.92396 * 179.76667 * 24 23 19 26 26 F 1.39904 * 109.46709 * 179.97438 * 25 24 23 27 27 F 1.39892 * 109.46956 * 299.97229 * 25 24 23 28 28 F 1.39898 * 109.47324 * 59.97379 * 25 24 23 29 29 C 1.38305 * 120.14634 * 359.73844 * 24 23 19 30 30 C 1.38079 * 120.07912 * 359.97438 * 29 24 23 31 31 H 1.09003 * 109.47629 * 60.00083 * 1 2 3 32 32 H 1.09004 * 109.47019 * 179.97438 * 1 2 3 33 33 H 1.09001 * 109.47281 * 300.00415 * 1 2 3 34 34 H 1.09004 * 109.46745 * 173.95537 * 3 2 1 35 35 H 1.08996 * 109.47262 * 53.95214 * 3 2 1 36 36 H 0.96993 * 119.99487 * 0.02562 * 6 4 3 37 37 H 1.08999 * 113.61492 * 334.65187 * 9 7 6 38 38 H 1.09002 * 113.68571 * 203.75538 * 9 7 6 39 39 H 1.08003 * 126.59103 * 359.97438 * 13 12 10 40 40 H 1.08001 * 125.99672 * 180.02562 * 14 13 12 41 41 H 1.07996 * 125.64878 * 179.97438 * 16 15 14 42 42 H 1.08994 * 113.61315 * 89.11514 * 17 10 9 43 43 H 1.08998 * 113.61162 * 220.01953 * 17 10 9 44 44 H 1.09002 * 109.47667 * 45.00147 * 20 19 18 45 45 H 0.96703 * 114.00633 * 179.97438 * 21 20 19 46 46 H 1.48500 * 109.99661 * 59.99605 * 22 20 19 47 47 H 1.48497 * 110.00064 * 181.31715 * 22 20 19 48 48 H 1.07997 * 119.96177 * 180.27359 * 23 19 18 49 49 H 1.08011 * 119.95764 * 180.02562 * 29 24 23 50 50 H 1.08002 * 120.03517 * 180.02562 * 30 29 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6369 2.0471 -1.2985 5 8 1.0047 1.4456 -2.1408 6 7 2.0179 3.3203 -1.5234 7 6 1.6689 3.9772 -2.7854 8 1 0.7958 3.5352 -3.2654 9 6 1.6067 5.5105 -2.6851 10 6 3.1037 5.5158 -3.0370 11 1 3.7570 5.4491 -2.1671 12 7 3.4869 6.5911 -3.9552 13 6 4.3943 7.5856 -3.7077 14 6 4.4412 8.3541 -4.8125 15 7 3.5861 7.8425 -5.7104 16 6 3.0107 6.7865 -5.2037 17 6 2.8640 4.1664 -3.7346 18 6 1.9695 -0.7283 1.0817 19 6 2.7068 -1.8845 0.8607 20 6 2.9685 -2.3548 -0.5468 21 8 1.7783 -2.9350 -1.0842 22 14 4.3286 -3.6280 -0.5333 23 6 3.2048 -2.5994 1.9325 24 6 2.9607 -2.1713 3.2244 25 6 3.5012 -2.9568 4.3914 26 9 3.1279 -2.3326 5.5866 27 9 2.9806 -4.2549 4.3609 28 9 4.8967 -3.0120 4.3102 29 6 2.2221 -1.0236 3.4480 30 6 1.7263 -0.3009 2.3810 31 1 -0.3634 0.5138 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 -0.3634 0.5139 0.8899 34 1 3.0797 1.3444 0.1082 35 1 1.5610 1.9274 0.8309 36 1 2.5232 3.8014 -0.8496 37 1 1.3933 5.8740 -1.6799 38 1 0.9778 5.9739 -3.4453 39 1 4.9628 7.7272 -2.8003 40 1 5.0595 9.2286 -4.9517 41 1 2.2755 6.1709 -5.7004 42 1 2.5787 4.2611 -4.7823 43 1 3.6656 3.4448 -3.5767 44 1 3.2700 -1.5077 -1.1629 45 1 1.8734 -3.2600 -1.9900 46 1 3.9298 -4.7882 0.3034 47 1 4.6180 -4.0766 -1.9190 48 1 3.7819 -3.4960 1.7614 49 1 2.0336 -0.6917 4.4584 50 1 1.1500 0.5955 2.5564 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608530_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:08 Heat of formation + Delta-G solvation = -58.955615 kcal Electronic energy + Delta-G solvation = -39192.290342 eV Core-core repulsion = 33581.610465 eV Total energy + Delta-G solvation = -5610.679876 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.156 amu Computer time = 2.05 seconds Orbital eigenvalues (eV) -51.22111 -48.74558 -48.68536 -43.09197 -41.72352 -40.93857 -39.43348 -37.74143 -37.50615 -34.85688 -33.16563 -32.91647 -32.06156 -30.29731 -29.34028 -27.60871 -26.98407 -26.90394 -26.01819 -24.98742 -23.41548 -22.52880 -22.14996 -21.97562 -21.51090 -20.31884 -19.54572 -19.51789 -19.29134 -18.80221 -18.50944 -18.22188 -17.56056 -17.10763 -16.95799 -16.48033 -16.18793 -16.06050 -16.01998 -15.63630 -15.60939 -15.49556 -15.28484 -15.12467 -15.09677 -15.05887 -14.88019 -14.84460 -14.72460 -14.64520 -14.54093 -14.41940 -14.00150 -13.92415 -13.79813 -13.66979 -13.63057 -13.40201 -12.99757 -12.94256 -12.75331 -12.59491 -12.23586 -12.05311 -11.93731 -11.65981 -10.93858 -10.89771 -10.48126 -10.42119 -10.21182 -10.13338 -10.07665 -9.54560 -9.43746 -5.01047 -0.32460 0.02246 1.12121 1.24667 1.51754 1.58422 1.61001 1.87031 1.88135 1.90968 2.16895 2.23058 2.62683 2.76501 2.92709 3.22028 3.32457 3.37864 3.41844 3.63406 3.66488 3.72063 3.77332 3.79506 3.86923 4.00856 4.02665 4.10476 4.15368 4.22918 4.35727 4.40029 4.43605 4.48433 4.49901 4.55247 4.59281 4.63984 4.67360 4.77839 4.83606 4.88152 4.91712 4.93874 4.99831 5.06481 5.18634 5.35265 5.42329 5.53133 5.68820 5.84981 6.16536 6.30392 6.54460 6.60458 7.16678 7.27856 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 N -0.498 5.498 3 C 0.036 3.964 4 C 0.519 3.481 5 O -0.558 6.558 6 N -0.702 5.702 7 C 0.131 3.869 8 H 0.095 0.905 9 C -0.140 4.140 10 C 0.110 3.890 11 H 0.148 0.852 12 N -0.445 5.445 13 C -0.046 4.046 14 C -0.067 4.067 15 N -0.543 5.543 16 C 0.173 3.827 17 C -0.154 4.154 18 C 0.143 3.857 19 C -0.061 4.061 20 C -0.056 4.056 21 O -0.546 6.546 22 Si 0.739 3.261 23 C -0.070 4.070 24 C -0.188 4.188 25 C 0.508 3.492 26 F -0.175 7.175 27 F -0.186 7.186 28 F -0.176 7.176 29 C -0.052 4.052 30 C -0.141 4.141 31 H 0.079 0.921 32 H 0.056 0.944 33 H 0.046 0.954 34 H 0.131 0.869 35 H 0.101 0.899 36 H 0.419 0.581 37 H 0.102 0.898 38 H 0.100 0.900 39 H 0.205 0.795 40 H 0.173 0.827 41 H 0.220 0.780 42 H 0.098 0.902 43 H 0.083 0.917 44 H 0.092 0.908 45 H 0.391 0.609 46 H -0.295 1.295 47 H -0.285 1.285 48 H 0.138 0.862 49 H 0.159 0.841 50 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.063 4.583 5.296 7.301 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 N -0.219 5.219 3 C -0.093 4.093 4 C 0.306 3.694 5 O -0.435 6.435 6 N -0.356 5.356 7 C 0.024 3.976 8 H 0.114 0.886 9 C -0.179 4.179 10 C 0.007 3.993 11 H 0.166 0.834 12 N -0.127 5.127 13 C -0.179 4.179 14 C -0.214 4.214 15 N -0.262 5.262 16 C -0.109 4.109 17 C -0.193 4.193 18 C 0.048 3.952 19 C -0.062 4.062 20 C -0.166 4.166 21 O -0.355 6.355 22 Si 0.645 3.355 23 C -0.088 4.088 24 C -0.189 4.189 25 C 0.454 3.546 26 F -0.157 7.157 27 F -0.168 7.168 28 F -0.158 7.158 29 C -0.071 4.071 30 C -0.161 4.161 31 H 0.097 0.903 32 H 0.075 0.925 33 H 0.064 0.936 34 H 0.149 0.851 35 H 0.119 0.881 36 H 0.256 0.744 37 H 0.120 0.880 38 H 0.118 0.882 39 H 0.222 0.778 40 H 0.190 0.810 41 H 0.236 0.764 42 H 0.116 0.884 43 H 0.102 0.898 44 H 0.110 0.890 45 H 0.240 0.760 46 H -0.223 1.223 47 H -0.212 1.212 48 H 0.155 0.845 49 H 0.177 0.823 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 1.592 3.470 3.980 5.515 hybrid contribution -0.623 -0.400 0.727 1.038 sum 0.968 3.071 4.707 5.703 Atomic orbital electron populations 1.22471 0.84495 1.02347 1.01947 1.59072 1.09492 1.12991 1.40364 1.22224 1.03985 0.88017 0.95118 1.20763 0.78282 0.81507 0.88854 1.90734 1.40346 1.64690 1.47706 1.45504 1.57841 1.13180 1.19066 1.21474 0.97973 0.92831 0.85320 0.88639 1.23768 0.94559 0.94584 1.04988 1.23467 0.97815 0.84669 0.93306 0.83417 1.45733 1.31129 1.22279 1.13541 1.23222 0.99177 0.92578 1.02926 1.22673 1.03115 1.03716 0.91901 1.70271 1.12262 1.10818 1.32885 1.25225 1.03055 0.98076 0.84595 1.23886 0.99495 0.95487 1.00478 1.18826 0.93943 0.93163 0.89221 1.19196 0.98624 0.94737 0.93648 1.24608 0.94504 1.04227 0.93265 1.86535 1.33789 1.80272 1.34915 0.94719 0.82862 0.78692 0.79226 1.20819 0.98133 0.98954 0.90941 1.19911 1.06983 0.99933 0.92081 1.18381 0.75781 0.77607 0.82858 1.93176 1.91218 1.82157 1.49120 1.93219 1.86694 1.40234 1.96645 1.93228 1.29882 1.96332 1.96338 1.21156 0.92876 0.91521 1.01538 1.21916 1.00920 1.01878 0.91409 0.90262 0.92505 0.93600 0.85116 0.88145 0.74352 0.87978 0.88165 0.77844 0.80976 0.76404 0.88375 0.89802 0.88988 0.75962 1.22325 1.21160 0.84499 0.82337 0.82066 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 8.94 127.69 1.14 1.12 16 2 N -0.50 1.33 3.71 -724.42 -2.69 -1.36 16 3 C 0.04 -0.34 5.03 85.56 0.43 0.09 16 4 C 0.52 -2.68 7.56 87.66 0.66 -2.02 16 5 O -0.56 -2.73 13.91 -3.05 -0.04 -2.78 16 6 N -0.70 8.06 5.27 -440.01 -2.32 5.75 16 7 C 0.13 -1.20 4.32 45.52 0.20 -1.00 16 8 H 0.10 -0.38 7.46 -2.39 -0.02 -0.40 16 9 C -0.14 1.61 7.51 31.12 0.23 1.85 16 10 C 0.11 -1.17 4.52 45.52 0.21 -0.96 16 11 H 0.15 -2.30 8.14 -2.39 -0.02 -2.32 16 12 N -0.44 1.50 2.94 -503.80 -1.48 0.02 16 13 C -0.05 0.08 11.58 83.09 0.96 1.04 16 14 C -0.07 -0.31 11.87 83.52 0.99 0.68 16 15 N -0.54 -4.84 11.25 -200.31 -2.25 -7.10 16 16 C 0.17 0.29 11.37 180.26 2.05 2.34 16 17 C -0.15 1.37 7.44 31.12 0.23 1.60 16 18 C 0.14 -0.38 4.65 38.21 0.18 -0.20 16 19 C -0.06 0.00 5.31 -19.74 -0.10 -0.10 16 20 C -0.06 0.01 2.33 71.23 0.17 0.18 16 21 O -0.55 -1.86 12.85 -148.98 -1.92 -3.78 16 22 Si 0.74 -0.69 30.19 68.60 2.07 1.38 16 23 C -0.07 -0.03 8.20 22.25 0.18 0.15 16 24 C -0.19 0.06 5.37 -19.84 -0.11 -0.04 16 25 C 0.51 1.02 3.31 71.24 0.24 1.26 16 26 F -0.18 -0.28 15.97 44.97 0.72 0.44 16 27 F -0.19 -1.02 17.23 44.97 0.78 -0.25 16 28 F -0.18 -0.47 17.23 44.97 0.78 0.30 16 29 C -0.05 0.24 9.42 22.25 0.21 0.44 16 30 C -0.14 0.89 8.70 22.40 0.19 1.09 16 31 H 0.08 0.25 5.88 -2.39 -0.01 0.23 16 32 H 0.06 0.20 8.13 -2.39 -0.02 0.18 16 33 H 0.05 -0.22 7.48 -2.39 -0.02 -0.24 16 34 H 0.13 -1.75 8.06 -2.38 -0.02 -1.77 16 35 H 0.10 -1.49 7.47 -2.39 -0.02 -1.50 16 36 H 0.42 -7.64 8.70 -92.71 -0.81 -8.45 16 37 H 0.10 -1.42 8.14 -2.39 -0.02 -1.44 16 38 H 0.10 -0.95 7.90 -2.39 -0.02 -0.96 16 39 H 0.20 -1.86 8.06 -2.91 -0.02 -1.88 16 40 H 0.17 0.30 8.06 -2.91 -0.02 0.28 16 41 H 0.22 -0.88 7.44 -2.91 -0.02 -0.90 16 42 H 0.10 -0.74 6.92 -2.39 -0.02 -0.76 16 43 H 0.08 -0.65 8.14 -2.39 -0.02 -0.67 16 44 H 0.09 -0.18 7.78 -2.39 -0.02 -0.20 16 45 H 0.39 -1.12 8.74 -74.05 -0.65 -1.77 16 46 H -0.30 -1.78 6.76 99.48 0.67 -1.10 16 47 H -0.28 -1.03 7.11 99.48 0.71 -0.32 16 48 H 0.14 0.07 4.90 -2.91 -0.01 0.06 16 49 H 0.16 -1.25 7.15 -2.91 -0.02 -1.27 16 50 H 0.16 -1.89 7.16 -2.91 -0.02 -1.91 16 Total: 0.00 -28.26 423.57 1.28 -26.98 By element: Atomic # 1 Polarization: -26.71 SS G_CDS: -0.42 Total: -27.13 kcal Atomic # 6 Polarization: -0.55 SS G_CDS: 8.06 Total: 7.51 kcal Atomic # 7 Polarization: 6.05 SS G_CDS: -8.74 Total: -2.69 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: -1.96 Total: -6.56 kcal Atomic # 9 Polarization: -1.77 SS G_CDS: 2.27 Total: 0.50 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: 2.07 Total: 1.38 kcal Total: -28.26 1.28 -26.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.977 kcal (2) G-P(sol) polarization free energy of solvation -28.257 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.234 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.979 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.956 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds