Wall clock time and date at job start Sun Mar 7 2021 07:05:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47286 * 2 1 4 4 C 1.50706 * 109.47301 * 120.00511 * 2 1 3 5 5 C 1.34229 * 126.49587 * 255.31144 * 4 2 1 6 6 N 1.36843 * 109.93717 * 180.16537 * 5 4 2 7 7 C 1.46493 * 125.06612 * 179.81470 * 6 5 4 8 8 C 1.50700 * 109.47149 * 264.69919 * 7 6 5 9 9 O 1.21283 * 120.00045 * 359.97438 * 8 7 6 10 10 N 1.34784 * 119.99928 * 179.97438 * 8 7 6 11 11 C 1.46498 * 119.99802 * 179.97438 * 10 8 7 12 12 H 1.08992 * 112.85128 * 336.20177 * 11 10 8 13 13 C 1.53779 * 113.68803 * 107.46795 * 11 10 8 14 14 C 1.53782 * 87.08003 * 139.99185 * 13 11 10 15 15 H 1.09008 * 113.68678 * 220.00926 * 14 13 11 16 16 N 1.46494 * 113.61543 * 89.11526 * 14 13 11 17 17 C 1.36888 * 126.39835 * 142.52719 * 16 14 13 18 18 C 1.34666 * 106.81628 * 179.97438 * 17 16 14 19 19 N 1.34121 * 108.02399 * 0.02562 * 18 17 16 20 20 C 1.30504 * 109.25569 * 359.97438 * 19 18 17 21 21 C 1.53778 * 87.08119 * 334.56569 * 14 13 11 22 22 C 1.37693 * 109.87124 * 359.55429 * 6 5 4 23 23 C 1.39081 * 133.51467 * 180.24204 * 22 6 5 24 24 C 1.37789 * 119.77911 * 180.02562 * 23 22 6 25 25 C 1.38794 * 120.66790 * 0.02562 * 24 23 22 26 26 C 1.36660 * 120.52511 * 359.97438 * 25 24 23 27 27 C 1.39593 * 119.76714 * 359.97438 * 26 25 24 28 28 H 0.96701 * 113.99553 * 299.99952 * 1 2 3 29 29 H 1.09001 * 109.46923 * 240.00015 * 2 1 3 30 30 H 1.48498 * 109.99902 * 300.00307 * 3 2 1 31 31 H 1.48502 * 109.99680 * 61.32464 * 3 2 1 32 32 H 1.08004 * 125.03666 * 0.02562 * 5 4 2 33 33 H 1.08993 * 109.47224 * 144.69648 * 7 6 5 34 34 H 1.09003 * 109.47322 * 24.69909 * 7 6 5 35 35 H 0.97000 * 119.99392 * 359.97438 * 10 8 7 36 36 H 1.09000 * 113.61629 * 25.44049 * 13 11 10 37 37 H 1.09004 * 113.61429 * 254.53913 * 13 11 10 38 38 H 1.08000 * 126.58824 * 0.02562 * 17 16 14 39 39 H 1.08001 * 125.98583 * 180.02562 * 18 17 16 40 40 H 1.08003 * 125.64628 * 179.97438 * 20 19 18 41 41 H 1.09000 * 113.61381 * 139.98142 * 21 14 13 42 42 H 1.08997 * 113.61413 * 270.80353 * 21 14 13 43 43 H 1.07997 * 120.11103 * 0.04176 * 23 22 6 44 44 H 1.07999 * 119.66963 * 179.97438 * 24 23 22 45 45 H 1.07997 * 119.73360 * 179.97438 * 25 24 23 46 46 H 1.08004 * 120.11673 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4555 -0.1374 2.3252 6 7 2.8029 -1.0992 3.2345 7 6 3.4077 -0.8407 4.5435 8 6 4.9060 -0.9631 4.4376 9 8 5.4181 -1.2396 3.3735 10 7 5.6769 -0.7653 5.5254 11 6 7.1333 -0.8849 5.4225 12 1 7.4487 -1.5127 4.5893 13 6 7.8703 0.4631 5.4916 14 6 8.9250 -0.2472 6.3565 15 1 9.2888 0.3570 7.1876 16 7 10.0071 -0.8568 5.5797 17 6 11.3297 -0.9065 5.9293 18 6 11.9709 -1.5530 4.9372 19 7 11.0648 -1.8885 4.0069 20 6 9.8863 -1.4748 4.3851 21 6 7.8179 -1.2380 6.7535 22 6 2.4940 -2.3459 2.7382 23 6 2.6293 -3.6364 3.2389 24 6 2.2159 -4.7109 2.4819 25 6 1.6651 -4.5195 1.2223 26 6 1.5229 -3.2602 0.7111 27 6 1.9341 -2.1571 1.4612 28 1 -0.3932 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 1.5615 2.4679 -1.2084 31 1 1.5880 2.4584 1.2243 32 1 2.5860 0.9254 2.4666 33 1 3.0341 -1.5662 5.2660 34 1 3.1477 0.1657 4.8715 35 1 5.2672 -0.5438 6.3763 36 1 7.3171 1.2363 6.0246 37 1 8.2518 0.8020 4.5283 38 1 11.7734 -0.5051 6.8284 39 1 13.0293 -1.7644 4.8976 40 1 8.9668 -1.6046 3.8337 41 1 8.1571 -2.2724 6.8091 42 1 7.2514 -0.9304 7.6325 43 1 3.0568 -3.7957 4.2178 44 1 2.3222 -5.7123 2.8722 45 1 1.3465 -5.3726 0.6418 46 1 1.0939 -3.1189 -0.2700 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15608530_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:37 Heat of formation + Delta-G solvation = 111.802319 kcal Electronic energy + Delta-G solvation = -30537.918057 eV Core-core repulsion = 26397.627684 eV Total energy + Delta-G solvation = -4140.290373 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.30030 -42.52172 -41.12636 -39.53713 -38.05397 -37.60572 -35.22604 -34.09982 -32.85414 -31.37407 -30.24848 -30.15234 -29.10077 -27.28603 -26.59384 -25.47999 -23.69441 -22.87633 -22.53693 -22.15070 -21.77296 -21.09638 -20.60918 -18.79219 -18.59465 -18.22022 -17.79933 -17.50604 -17.07725 -16.56168 -16.33058 -16.17470 -16.11807 -15.84819 -15.53653 -15.42044 -15.30179 -14.85082 -14.74412 -14.63007 -14.42547 -14.18637 -14.02078 -13.89568 -13.85066 -13.58213 -13.33313 -13.30899 -12.62234 -12.49631 -12.42189 -12.30795 -12.12457 -11.90483 -11.65130 -11.20823 -10.86514 -10.58976 -10.45735 -10.41718 -10.37476 -9.45554 -9.05563 -8.56713 -4.88419 0.24790 0.76412 1.04381 1.24946 1.34284 1.37076 1.59408 1.62160 1.66028 1.99612 2.00882 2.29121 2.79403 3.03011 3.08163 3.26481 3.34043 3.44098 3.48488 3.56567 3.68387 3.73731 3.76100 3.81507 3.82832 4.03130 4.04132 4.12542 4.14678 4.29387 4.34060 4.40649 4.51162 4.54149 4.57102 4.67552 4.70080 4.78441 4.79507 4.87755 4.97149 5.07969 5.23227 5.28315 5.62156 5.77843 5.81193 5.83406 5.87454 6.02323 6.20189 6.24334 6.32801 6.57574 6.86119 7.17030 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.191 4.191 5 C 0.065 3.935 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.492 3.508 9 O -0.507 6.507 10 N -0.719 5.719 11 C 0.119 3.881 12 H 0.121 0.879 13 C -0.157 4.157 14 C 0.110 3.890 15 H 0.120 0.880 16 N -0.446 5.446 17 C -0.054 4.054 18 C -0.028 4.028 19 N -0.490 5.490 20 C 0.179 3.821 21 C -0.153 4.153 22 C 0.109 3.891 23 C -0.128 4.128 24 C -0.096 4.096 25 C -0.145 4.145 26 C -0.064 4.064 27 C -0.086 4.086 28 H 0.372 0.628 29 H 0.115 0.885 30 H -0.255 1.255 31 H -0.261 1.261 32 H 0.168 0.832 33 H 0.118 0.882 34 H 0.122 0.878 35 H 0.404 0.596 36 H 0.108 0.892 37 H 0.087 0.913 38 H 0.175 0.825 39 H 0.171 0.829 40 H 0.202 0.798 41 H 0.087 0.913 42 H 0.108 0.892 43 H 0.114 0.886 44 H 0.125 0.875 45 H 0.123 0.877 46 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.385 3.649 9.201 9.905 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.148 4.148 3 Si 0.584 3.416 4 C -0.198 4.198 5 C -0.060 4.060 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.276 3.724 9 O -0.380 6.380 10 N -0.372 5.372 11 C 0.014 3.986 12 H 0.138 0.862 13 C -0.196 4.196 14 C 0.005 3.995 15 H 0.138 0.862 16 N -0.130 5.130 17 C -0.186 4.186 18 C -0.175 4.175 19 N -0.207 5.207 20 C -0.102 4.102 21 C -0.192 4.192 22 C 0.004 3.996 23 C -0.149 4.149 24 C -0.115 4.115 25 C -0.164 4.164 26 C -0.083 4.083 27 C -0.090 4.090 28 H 0.219 0.781 29 H 0.132 0.868 30 H -0.180 1.180 31 H -0.186 1.186 32 H 0.185 0.815 33 H 0.136 0.864 34 H 0.140 0.860 35 H 0.239 0.761 36 H 0.126 0.874 37 H 0.105 0.895 38 H 0.193 0.807 39 H 0.189 0.811 40 H 0.219 0.781 41 H 0.106 0.894 42 H 0.127 0.873 43 H 0.132 0.868 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.064 3.694 7.475 8.338 hybrid contribution -1.242 0.403 1.990 2.381 sum -1.178 4.097 9.465 10.381 Atomic orbital electron populations 1.86611 1.18133 1.79959 1.48944 1.24290 0.83291 1.09832 0.97379 0.95019 0.91784 0.74455 0.80377 1.20586 1.09699 0.92343 0.97221 1.21576 1.01038 0.93963 0.89423 1.43179 1.52596 1.04679 1.14546 1.21571 0.90617 1.05842 0.85404 1.21094 0.89586 0.77176 0.84515 1.90829 1.74558 1.45056 1.27574 1.45887 1.06557 1.72503 1.12258 1.22788 0.79107 0.97391 0.99298 0.86172 1.23925 0.95963 0.98062 1.01664 1.22093 0.86261 0.95871 0.95257 0.86176 1.45289 1.07221 1.42986 1.17487 1.22762 0.83137 1.09112 1.03566 1.22400 0.99861 1.03194 0.92085 1.70367 0.99153 1.22414 1.28790 1.25105 0.99174 0.99254 0.86705 1.23823 0.96064 1.01186 0.98090 1.18165 1.01226 0.85812 0.94357 1.19942 1.05093 0.89247 1.00623 1.20835 0.98218 0.97949 0.94472 1.20682 1.02375 0.96969 0.96393 1.20319 0.97878 0.90910 0.99184 1.18939 1.03396 0.92782 0.93902 0.78055 0.86751 1.17997 1.18557 0.81466 0.86406 0.85974 0.76108 0.87359 0.89467 0.80736 0.81141 0.78122 0.89411 0.87323 0.86794 0.85709 0.85882 0.85872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.27 12.88 -35.23 -0.45 -1.73 16 2 C -0.04 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.21 30.83 -169.99 -5.24 -5.45 16 4 C -0.19 -0.40 5.57 -102.71 -0.57 -0.97 16 5 C 0.06 0.03 9.89 -16.73 -0.17 -0.13 16 6 N -0.47 -0.27 2.27 -115.71 -0.26 -0.53 16 7 C 0.09 -0.32 6.48 -5.20 -0.03 -0.35 16 8 C 0.49 -0.75 7.90 -10.98 -0.09 -0.83 16 9 O -0.51 -1.80 16.02 5.56 0.09 -1.71 16 10 N -0.72 3.35 5.36 -53.02 -0.28 3.07 16 11 C 0.12 -0.42 3.73 -67.12 -0.25 -0.67 16 12 H 0.12 -0.12 4.96 -51.93 -0.26 -0.38 16 13 C -0.16 0.66 7.30 -25.92 -0.19 0.47 16 14 C 0.11 -0.44 4.88 -67.12 -0.33 -0.76 16 15 H 0.12 -0.67 8.14 -51.92 -0.42 -1.09 16 16 N -0.45 0.21 2.94 -110.59 -0.33 -0.11 16 17 C -0.05 0.00 11.58 -16.56 -0.19 -0.20 16 18 C -0.03 -0.07 11.87 -17.82 -0.21 -0.28 16 19 N -0.49 -2.35 11.25 -14.67 -0.17 -2.51 16 20 C 0.18 0.35 11.19 -90.37 -1.01 -0.66 16 21 C -0.15 0.76 7.54 -25.92 -0.20 0.57 16 22 C 0.11 0.32 6.80 -83.99 -0.57 -0.25 16 23 C -0.13 -0.28 10.00 -39.43 -0.39 -0.67 16 24 C -0.10 -0.19 10.01 -39.54 -0.40 -0.59 16 25 C -0.15 -0.36 9.97 -39.95 -0.40 -0.75 16 26 C -0.06 -0.22 10.05 -39.65 -0.40 -0.62 16 27 C -0.09 -0.33 6.35 -105.14 -0.67 -1.00 16 28 H 0.37 -0.26 8.70 45.56 0.40 0.14 16 29 H 0.11 0.14 7.96 -51.93 -0.41 -0.27 16 30 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 31 H -0.26 -0.12 6.99 56.52 0.40 0.28 16 32 H 0.17 -0.37 6.28 -52.48 -0.33 -0.70 16 33 H 0.12 -0.65 8.14 -51.93 -0.42 -1.07 16 34 H 0.12 -0.82 8.12 -51.93 -0.42 -1.24 16 35 H 0.40 -3.21 8.73 -40.82 -0.36 -3.57 16 36 H 0.11 -0.64 8.14 -51.93 -0.42 -1.07 16 37 H 0.09 -0.19 8.02 -51.93 -0.42 -0.61 16 38 H 0.18 -0.52 8.06 -52.49 -0.42 -0.94 16 39 H 0.17 0.09 8.06 -52.49 -0.42 -0.33 16 40 H 0.20 0.10 5.86 -52.48 -0.31 -0.20 16 41 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 42 H 0.11 -0.79 8.12 -51.93 -0.42 -1.21 16 43 H 0.11 0.02 8.06 -52.49 -0.42 -0.41 16 44 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 45 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 46 H 0.12 0.31 8.06 -52.48 -0.42 -0.11 16 LS Contribution 387.48 15.07 5.84 5.84 Total: 0.00 -12.70 387.48 -12.71 -25.42 By element: Atomic # 1 Polarization: -8.67 SS G_CDS: -5.96 Total: -14.63 kcal Atomic # 6 Polarization: -1.70 SS G_CDS: -5.95 Total: -7.65 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -1.04 Total: -0.09 kcal Atomic # 8 Polarization: -3.07 SS G_CDS: -0.36 Total: -3.43 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.24 Total: -5.45 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -12.70 -12.71 -25.42 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.218 kcal (2) G-P(sol) polarization free energy of solvation -12.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 124.516 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.714 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.416 kcal (6) G-S(sol) free energy of system = (1) + (5) 111.802 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds