Wall clock time and date at job start Sun Mar 7 2021 07:05:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47286 * 2 1 4 4 C 1.50706 * 109.47301 * 120.00511 * 2 1 3 5 5 C 1.34229 * 126.49587 * 255.31144 * 4 2 1 6 6 N 1.36843 * 109.93717 * 180.16537 * 5 4 2 7 7 C 1.46493 * 125.06612 * 179.81470 * 6 5 4 8 8 C 1.50700 * 109.47149 * 264.69919 * 7 6 5 9 9 O 1.21283 * 120.00045 * 359.97438 * 8 7 6 10 10 N 1.34784 * 119.99928 * 179.97438 * 8 7 6 11 11 C 1.46498 * 119.99802 * 179.97438 * 10 8 7 12 12 H 1.08992 * 112.85128 * 336.20177 * 11 10 8 13 13 C 1.53779 * 113.68803 * 107.46795 * 11 10 8 14 14 C 1.53782 * 87.08003 * 139.99185 * 13 11 10 15 15 H 1.09008 * 113.68678 * 220.00926 * 14 13 11 16 16 N 1.46494 * 113.61543 * 89.11526 * 14 13 11 17 17 C 1.36888 * 126.39835 * 142.52719 * 16 14 13 18 18 C 1.34666 * 106.81628 * 179.97438 * 17 16 14 19 19 N 1.34121 * 108.02399 * 0.02562 * 18 17 16 20 20 C 1.30504 * 109.25569 * 359.97438 * 19 18 17 21 21 C 1.53778 * 87.08119 * 334.56569 * 14 13 11 22 22 C 1.37693 * 109.87124 * 359.55429 * 6 5 4 23 23 C 1.39081 * 133.51467 * 180.24204 * 22 6 5 24 24 C 1.37789 * 119.77911 * 180.02562 * 23 22 6 25 25 C 1.38794 * 120.66790 * 0.02562 * 24 23 22 26 26 C 1.36660 * 120.52511 * 359.97438 * 25 24 23 27 27 C 1.39593 * 119.76714 * 359.97438 * 26 25 24 28 28 H 0.96701 * 113.99553 * 299.99952 * 1 2 3 29 29 H 1.09001 * 109.46923 * 240.00015 * 2 1 3 30 30 H 1.48498 * 109.99902 * 300.00307 * 3 2 1 31 31 H 1.48502 * 109.99680 * 61.32464 * 3 2 1 32 32 H 1.08004 * 125.03666 * 0.02562 * 5 4 2 33 33 H 1.08993 * 109.47224 * 144.69648 * 7 6 5 34 34 H 1.09003 * 109.47322 * 24.69909 * 7 6 5 35 35 H 0.97000 * 119.99392 * 359.97438 * 10 8 7 36 36 H 1.09000 * 113.61629 * 25.44049 * 13 11 10 37 37 H 1.09004 * 113.61429 * 254.53913 * 13 11 10 38 38 H 1.08000 * 126.58824 * 0.02562 * 17 16 14 39 39 H 1.08001 * 125.98583 * 180.02562 * 18 17 16 40 40 H 1.08003 * 125.64628 * 179.97438 * 20 19 18 41 41 H 1.09000 * 113.61381 * 139.98142 * 21 14 13 42 42 H 1.08997 * 113.61413 * 270.80353 * 21 14 13 43 43 H 1.07997 * 120.11103 * 0.04176 * 23 22 6 44 44 H 1.07999 * 119.66963 * 179.97438 * 24 23 22 45 45 H 1.07997 * 119.73360 * 179.97438 * 25 24 23 46 46 H 1.08004 * 120.11673 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4555 -0.1374 2.3252 6 7 2.8029 -1.0992 3.2345 7 6 3.4077 -0.8407 4.5435 8 6 4.9060 -0.9631 4.4376 9 8 5.4181 -1.2396 3.3735 10 7 5.6769 -0.7653 5.5254 11 6 7.1333 -0.8849 5.4225 12 1 7.4487 -1.5127 4.5893 13 6 7.8703 0.4631 5.4916 14 6 8.9250 -0.2472 6.3565 15 1 9.2888 0.3570 7.1876 16 7 10.0071 -0.8568 5.5797 17 6 11.3297 -0.9065 5.9293 18 6 11.9709 -1.5530 4.9372 19 7 11.0648 -1.8885 4.0069 20 6 9.8863 -1.4748 4.3851 21 6 7.8179 -1.2380 6.7535 22 6 2.4940 -2.3459 2.7382 23 6 2.6293 -3.6364 3.2389 24 6 2.2159 -4.7109 2.4819 25 6 1.6651 -4.5195 1.2223 26 6 1.5229 -3.2602 0.7111 27 6 1.9341 -2.1571 1.4612 28 1 -0.3932 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 1.5615 2.4679 -1.2084 31 1 1.5880 2.4584 1.2243 32 1 2.5860 0.9254 2.4666 33 1 3.0341 -1.5662 5.2660 34 1 3.1477 0.1657 4.8715 35 1 5.2672 -0.5438 6.3763 36 1 7.3171 1.2363 6.0246 37 1 8.2518 0.8020 4.5283 38 1 11.7734 -0.5051 6.8284 39 1 13.0293 -1.7644 4.8976 40 1 8.9668 -1.6046 3.8337 41 1 8.1571 -2.2724 6.8091 42 1 7.2514 -0.9304 7.6325 43 1 3.0568 -3.7957 4.2178 44 1 2.3222 -5.7123 2.8722 45 1 1.3465 -5.3726 0.6418 46 1 1.0939 -3.1189 -0.2700 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608530_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:05:36 Heat of formation + Delta-G solvation = 110.758737 kcal Electronic energy + Delta-G solvation = -30537.963310 eV Core-core repulsion = 26397.627684 eV Total energy + Delta-G solvation = -4140.335626 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.26802 -42.53609 -40.97372 -39.38042 -38.15578 -37.68038 -35.08015 -34.08702 -32.82786 -31.41470 -30.28565 -30.24633 -29.04336 -26.91887 -26.48483 -25.42874 -23.77933 -22.89695 -22.48030 -22.17076 -21.62976 -21.00638 -20.64387 -18.73011 -18.44858 -18.08530 -17.73282 -17.40854 -16.99298 -16.44431 -16.41941 -16.16622 -16.08145 -15.79563 -15.53744 -15.34709 -15.26098 -14.89430 -14.79963 -14.71889 -14.41818 -14.07819 -13.99366 -13.72652 -13.57720 -13.53927 -13.15151 -13.05258 -12.72990 -12.58246 -12.40697 -12.18822 -12.01190 -11.84209 -11.74079 -11.14122 -10.96175 -10.58519 -10.55178 -10.45398 -10.16659 -9.50455 -9.16860 -8.63974 -4.86602 0.13230 0.62865 1.04156 1.34561 1.40521 1.45482 1.57131 1.68094 1.76280 1.97094 2.16275 2.20946 2.93990 3.11303 3.36038 3.53046 3.56238 3.62173 3.67505 3.69395 3.76001 3.84063 3.85575 4.01547 4.03346 4.15143 4.21010 4.27798 4.30504 4.40644 4.49332 4.57934 4.58279 4.61028 4.70973 4.74933 4.75786 4.78303 4.86539 4.88689 4.99366 5.12963 5.29497 5.40079 5.49798 5.65409 5.72361 5.74245 5.79135 6.18361 6.22474 6.23467 6.48108 6.60481 7.09868 7.15234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.052 4.052 3 Si 0.765 3.235 4 C -0.216 4.216 5 C 0.076 3.924 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.492 3.508 9 O -0.568 6.568 10 N -0.698 5.698 11 C 0.110 3.890 12 H 0.087 0.913 13 C -0.147 4.147 14 C 0.102 3.898 15 H 0.150 0.850 16 N -0.440 5.440 17 C -0.038 4.038 18 C -0.066 4.066 19 N -0.541 5.541 20 C 0.167 3.833 21 C -0.136 4.136 22 C 0.092 3.908 23 C -0.133 4.133 24 C -0.108 4.108 25 C -0.154 4.154 26 C -0.089 4.089 27 C -0.116 4.116 28 H 0.384 0.616 29 H 0.101 0.899 30 H -0.303 1.303 31 H -0.256 1.256 32 H 0.199 0.801 33 H 0.143 0.857 34 H 0.164 0.836 35 H 0.424 0.576 36 H 0.137 0.863 37 H 0.062 0.938 38 H 0.211 0.789 39 H 0.178 0.822 40 H 0.203 0.797 41 H 0.070 0.930 42 H 0.144 0.856 43 H 0.134 0.866 44 H 0.144 0.856 45 H 0.135 0.865 46 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.554 5.498 13.050 14.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.160 4.160 3 Si 0.667 3.333 4 C -0.223 4.223 5 C -0.050 4.050 6 N -0.148 5.148 7 C -0.037 4.037 8 C 0.277 3.723 9 O -0.445 6.445 10 N -0.351 5.351 11 C 0.005 3.995 12 H 0.105 0.895 13 C -0.186 4.186 14 C -0.001 4.001 15 H 0.168 0.832 16 N -0.122 5.122 17 C -0.171 4.171 18 C -0.213 4.213 19 N -0.260 5.260 20 C -0.115 4.115 21 C -0.174 4.174 22 C -0.013 4.013 23 C -0.154 4.154 24 C -0.127 4.127 25 C -0.173 4.173 26 C -0.108 4.108 27 C -0.121 4.121 28 H 0.233 0.767 29 H 0.119 0.881 30 H -0.231 1.231 31 H -0.181 1.181 32 H 0.215 0.785 33 H 0.160 0.840 34 H 0.182 0.818 35 H 0.263 0.737 36 H 0.155 0.845 37 H 0.081 0.919 38 H 0.227 0.773 39 H 0.195 0.805 40 H 0.220 0.780 41 H 0.089 0.911 42 H 0.162 0.838 43 H 0.151 0.849 44 H 0.162 0.838 45 H 0.153 0.847 46 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -0.122 5.539 11.424 12.696 hybrid contribution -1.191 -0.186 0.803 1.449 sum -1.314 5.353 12.227 13.412 Atomic orbital electron populations 1.86566 1.19070 1.80611 1.49856 1.24591 0.82830 1.11697 0.96890 0.94046 0.90439 0.71058 0.77733 1.20702 1.11447 0.91832 0.98338 1.22018 0.99147 0.95187 0.88638 1.43423 1.51905 1.03706 1.15782 1.21999 0.88818 1.09040 0.83883 1.21459 0.90525 0.76137 0.84150 1.90824 1.75665 1.48075 1.29945 1.45701 1.05967 1.71008 1.12468 1.22708 0.79792 0.97707 0.99327 0.89473 1.23908 0.95764 0.98091 1.00806 1.22465 0.85711 0.96407 0.95535 0.83249 1.45490 1.08033 1.41933 1.16785 1.23258 0.83050 1.07162 1.03596 1.22731 1.00410 1.05101 0.93010 1.70269 1.00682 1.24291 1.30779 1.25099 0.98581 0.99871 0.87924 1.23801 0.95323 1.00012 0.98275 1.18378 1.01505 0.87044 0.94407 1.20237 1.04617 0.89083 1.01433 1.21132 0.98198 0.99056 0.94347 1.20915 1.02390 0.97022 0.97002 1.20454 0.99123 0.91759 0.99425 1.19349 1.04041 0.93829 0.94853 0.76735 0.88060 1.23089 1.18121 0.78464 0.83952 0.81832 0.73672 0.84526 0.91898 0.77255 0.80514 0.78018 0.91124 0.83780 0.84854 0.83776 0.84702 0.86439 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.62 12.88 -148.98 -1.92 -5.54 16 2 C -0.05 -0.21 3.06 71.24 0.22 0.00 16 3 Si 0.76 -0.43 30.83 68.60 2.11 1.68 16 4 C -0.22 -1.15 5.57 -18.63 -0.10 -1.26 16 5 C 0.08 0.02 9.89 83.00 0.82 0.84 16 6 N -0.47 -0.16 2.27 -520.01 -1.18 -1.34 16 7 C 0.09 -0.82 6.48 85.63 0.56 -0.27 16 8 C 0.49 -2.07 7.90 87.66 0.69 -1.38 16 9 O -0.57 -4.53 16.02 -3.04 -0.05 -4.58 16 10 N -0.70 8.01 5.36 -440.04 -2.36 5.65 16 11 C 0.11 -0.88 3.73 45.52 0.17 -0.71 16 12 H 0.09 -0.03 4.96 -2.39 -0.01 -0.05 16 13 C -0.15 1.48 7.30 31.12 0.23 1.71 16 14 C 0.10 -1.02 4.88 45.52 0.22 -0.80 16 15 H 0.15 -2.29 8.14 -2.38 -0.02 -2.31 16 16 N -0.44 0.52 2.94 -503.80 -1.48 -0.97 16 17 C -0.04 0.02 11.58 83.08 0.96 0.98 16 18 C -0.07 -0.41 11.87 83.52 0.99 0.58 16 19 N -0.54 -6.51 11.25 -200.32 -2.25 -8.76 16 20 C 0.17 0.97 11.19 180.26 2.02 2.99 16 21 C -0.14 1.66 7.54 31.12 0.23 1.89 16 22 C 0.09 0.60 6.80 39.03 0.27 0.87 16 23 C -0.13 -0.64 10.00 22.37 0.22 -0.41 16 24 C -0.11 -0.54 10.01 22.30 0.22 -0.32 16 25 C -0.15 -1.07 9.97 22.03 0.22 -0.85 16 26 C -0.09 -0.87 10.05 22.23 0.22 -0.65 16 27 C -0.12 -1.13 6.35 -20.20 -0.13 -1.26 16 28 H 0.38 -0.13 8.70 -74.06 -0.64 -0.78 16 29 H 0.10 0.56 7.96 -2.39 -0.02 0.55 16 30 H -0.30 -2.23 7.11 99.48 0.71 -1.52 16 31 H -0.26 0.31 6.99 99.48 0.70 1.01 16 32 H 0.20 -1.34 6.28 -2.91 -0.02 -1.36 16 33 H 0.14 -2.03 8.14 -2.39 -0.02 -2.04 16 34 H 0.16 -2.92 8.12 -2.39 -0.02 -2.94 16 35 H 0.42 -8.38 8.73 -92.71 -0.81 -9.19 16 36 H 0.14 -2.14 8.14 -2.39 -0.02 -2.16 16 37 H 0.06 -0.27 8.02 -2.38 -0.02 -0.29 16 38 H 0.21 -1.77 8.06 -2.91 -0.02 -1.80 16 39 H 0.18 0.49 8.06 -2.91 -0.02 0.47 16 40 H 0.20 0.85 5.86 -2.91 -0.02 0.83 16 41 H 0.07 -0.54 8.14 -2.39 -0.02 -0.56 16 42 H 0.14 -2.75 8.12 -2.39 -0.02 -2.77 16 43 H 0.13 -0.04 8.06 -2.91 -0.02 -0.07 16 44 H 0.14 0.00 8.06 -2.91 -0.02 -0.03 16 45 H 0.14 0.41 8.06 -2.91 -0.02 0.39 16 46 H 0.12 1.06 8.06 -2.91 -0.02 1.04 16 Total: 0.00 -35.97 387.48 0.51 -35.46 By element: Atomic # 1 Polarization: -23.17 SS G_CDS: -0.39 Total: -23.56 kcal Atomic # 6 Polarization: -6.08 SS G_CDS: 8.03 Total: 1.95 kcal Atomic # 7 Polarization: 1.86 SS G_CDS: -7.27 Total: -5.41 kcal Atomic # 8 Polarization: -8.15 SS G_CDS: -1.97 Total: -10.12 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: 2.11 Total: 1.68 kcal Total: -35.97 0.51 -35.46 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 146.216 kcal (2) G-P(sol) polarization free energy of solvation -35.970 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.246 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.457 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.759 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds