Wall clock time and date at job start Sun Mar 7 2021 02:41:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.30833 * 125.95883 * 2 1 4 4 C 1.33246 * 109.82627 * 180.23770 * 3 2 1 5 5 C 1.50698 * 125.52316 * 179.73039 * 4 3 2 6 6 H 1.08993 * 109.47519 * 0.02562 * 5 4 3 7 7 C 1.53001 * 109.47131 * 120.01656 * 5 4 3 8 8 C 1.52998 * 109.47371 * 179.97438 * 7 5 4 9 9 C 1.53008 * 109.47050 * 299.99971 * 8 7 5 10 10 H 1.08993 * 109.47144 * 300.00150 * 9 8 7 11 11 N 1.46499 * 109.47092 * 180.02562 * 9 8 7 12 12 C 1.34772 * 120.00395 * 84.99841 * 11 9 8 13 13 O 1.21283 * 119.99890 * 0.02562 * 12 11 9 14 14 C 1.50696 * 120.00460 * 179.97438 * 12 11 9 15 15 O 1.42897 * 109.47449 * 180.02562 * 14 12 11 16 16 C 1.35899 * 116.99821 * 180.02562 * 15 14 12 17 17 C 1.38713 * 120.05362 * 179.72465 * 16 15 14 18 18 C 1.50702 * 120.02983 * 359.97438 * 17 16 15 19 19 O 1.42905 * 109.47058 * 74.99975 * 18 17 16 20 20 Si 1.86301 * 109.47561 * 195.00180 * 18 17 16 21 21 C 1.38170 * 119.94375 * 179.67667 * 17 16 15 22 22 C 1.38245 * 120.05305 * 0.61307 * 21 17 16 23 23 C 1.38280 * 120.11017 * 359.68281 * 22 21 17 24 24 C 1.38124 * 120.06164 * 359.97438 * 23 22 21 25 25 C 1.53001 * 109.47010 * 59.99808 * 9 8 7 26 26 C 1.52998 * 109.47049 * 300.00197 * 25 9 8 27 27 N 1.30709 * 108.94800 * 359.76504 * 4 3 2 28 28 N 1.34429 * 125.96217 * 179.83158 * 2 1 3 29 29 H 1.08997 * 109.47137 * 270.18896 * 1 2 3 30 30 H 1.09002 * 109.47259 * 30.19549 * 1 2 3 31 31 H 1.09006 * 109.46578 * 150.19004 * 1 2 3 32 32 H 1.09004 * 109.47157 * 299.99758 * 7 5 4 33 33 H 1.09007 * 109.46947 * 59.99745 * 7 5 4 34 34 H 1.09000 * 109.47486 * 179.97438 * 8 7 5 35 35 H 1.08993 * 109.47270 * 60.00043 * 8 7 5 36 36 H 0.97000 * 119.99571 * 264.99949 * 11 9 8 37 37 H 1.09003 * 109.47088 * 300.00658 * 14 12 11 38 38 H 1.09002 * 109.46921 * 59.99681 * 14 12 11 39 39 H 1.09005 * 109.46762 * 315.00452 * 18 17 16 40 40 H 0.96697 * 113.99773 * 59.99863 * 19 18 17 41 41 H 1.48502 * 109.99601 * 58.67821 * 20 18 17 42 42 H 1.48491 * 110.00088 * 179.97438 * 20 18 17 43 43 H 1.07998 * 119.97045 * 180.31938 * 21 17 16 44 44 H 1.07998 * 119.94371 * 179.70346 * 22 21 17 45 45 H 1.08011 * 119.97073 * 180.02562 * 23 22 21 46 46 H 1.07995 * 120.03101 * 180.02562 * 24 23 22 47 47 H 1.08996 * 109.46857 * 180.02562 * 25 9 8 48 48 H 1.09007 * 109.46947 * 60.00093 * 25 9 8 49 49 H 1.08999 * 109.46845 * 299.99762 * 26 25 9 50 50 H 1.09000 * 109.47164 * 180.02562 * 26 25 9 51 51 H 0.97001 * 126.82629 * 0.04437 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0590 0.0000 4 6 3.5552 0.6888 -0.0052 5 6 4.7371 1.6237 -0.0127 6 1 4.3846 2.6550 -0.0127 7 6 5.5906 1.3767 1.2329 8 6 6.7909 2.3255 1.2251 9 6 7.6322 2.0732 -0.0278 10 1 7.9843 1.0418 -0.0274 11 7 8.7818 2.9812 -0.0350 12 6 9.9065 2.6499 0.6296 13 8 9.9670 1.5998 1.2334 14 6 11.0893 3.5836 0.6217 15 8 12.1510 3.0141 1.3900 16 6 13.2991 3.7349 1.4852 17 6 14.3684 3.2444 2.2203 18 6 14.2579 1.9116 2.9148 19 8 14.3573 0.8620 1.9501 20 14 15.6343 1.7437 4.1591 21 6 15.5370 3.9761 2.3100 22 6 15.6366 5.2019 1.6785 23 6 14.5699 5.6957 0.9503 24 6 13.4020 4.9650 0.8516 25 6 6.7787 2.3202 -1.2734 26 6 5.5784 1.3715 -1.2655 27 7 3.6195 -0.6167 -0.0035 28 7 2.2964 -1.0881 0.0032 29 1 -0.3633 0.0034 1.0276 30 1 -0.3634 0.8882 -0.5169 31 1 -0.3633 -0.8918 -0.5109 32 1 4.9912 1.5560 2.1255 33 1 5.9432 0.3453 1.2331 34 1 7.3987 2.1499 2.1127 35 1 6.4388 3.3569 1.2247 36 1 8.7336 3.8209 -0.5182 37 1 11.4249 3.7363 -0.4041 38 1 10.7994 4.5408 1.0553 39 1 13.2969 1.8463 3.4250 40 1 15.1890 0.8587 1.4568 41 1 15.5609 2.8477 5.1496 42 1 15.5361 0.4336 4.8513 43 1 16.3716 3.5923 2.8779 44 1 16.5492 5.7745 1.7538 45 1 14.6504 6.6535 0.4574 46 1 12.5694 5.3510 0.2823 47 1 7.3779 2.1400 -2.1659 48 1 6.4265 3.3518 -1.2738 49 1 5.9306 0.3400 -1.2651 50 1 4.9706 1.5471 -2.1531 51 1 2.0094 -2.0146 0.0053 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608548_2989392.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:41:49 Heat of formation + Delta-G solvation = -2.320243 kcal Electronic energy + Delta-G solvation = -33086.647811 eV Core-core repulsion = 28568.103564 eV Total energy + Delta-G solvation = -4518.544247 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -43.25816 -41.66398 -40.91452 -39.41038 -38.40750 -37.47870 -35.83243 -33.85282 -33.40714 -32.72554 -31.91185 -31.53975 -30.81012 -29.15765 -28.48974 -26.67401 -24.88085 -23.87592 -23.44653 -22.60753 -22.36179 -21.60494 -21.50292 -20.59676 -19.47007 -18.94120 -18.41054 -17.98357 -17.46929 -17.33826 -16.86265 -16.77257 -16.63912 -16.15995 -15.99126 -15.61345 -15.45804 -15.26828 -15.13669 -14.99826 -14.95539 -14.77148 -14.22469 -14.09316 -14.03624 -13.78529 -13.70275 -13.56378 -13.41580 -13.28442 -13.00619 -12.87432 -12.39221 -12.37290 -12.29090 -12.21115 -12.18029 -12.06956 -11.76113 -11.69593 -11.50153 -11.12641 -11.08041 -10.98423 -10.50030 -10.38310 -10.19563 -9.94451 -9.20269 -5.06443 0.25861 0.43498 0.52696 1.28065 1.41944 1.47937 1.61427 1.67124 1.75627 1.94818 2.57794 2.72986 2.90488 3.44112 3.52414 3.56000 3.62402 3.66936 3.75603 3.78510 3.90496 3.98385 4.03117 4.04959 4.13634 4.15269 4.16873 4.32138 4.32888 4.34775 4.37589 4.41245 4.54055 4.59383 4.61299 4.64482 4.66879 4.78217 4.96553 4.97929 4.99384 5.00227 5.05346 5.08407 5.19726 5.22027 5.29561 5.30489 5.35055 5.40010 5.45092 5.54998 5.78873 6.13200 6.28918 6.47494 6.81353 7.02614 7.12539 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.285 3.715 3 N -0.573 5.573 4 C 0.225 3.775 5 C 0.010 3.990 6 H 0.111 0.889 7 C -0.099 4.099 8 C -0.119 4.119 9 C 0.147 3.853 10 H 0.060 0.940 11 N -0.703 5.703 12 C 0.511 3.489 13 O -0.572 6.572 14 C 0.037 3.963 15 O -0.316 6.316 16 C 0.125 3.875 17 C -0.173 4.173 18 C -0.074 4.074 19 O -0.557 6.557 20 Si 0.797 3.203 21 C -0.079 4.079 22 C -0.154 4.154 23 C -0.076 4.076 24 C -0.214 4.214 25 C -0.111 4.111 26 C -0.100 4.100 27 N -0.344 5.344 28 N -0.480 5.480 29 H 0.106 0.894 30 H 0.102 0.898 31 H 0.110 0.890 32 H 0.062 0.938 33 H 0.052 0.948 34 H 0.047 0.953 35 H 0.091 0.909 36 H 0.422 0.578 37 H 0.123 0.877 38 H 0.122 0.878 39 H 0.077 0.923 40 H 0.391 0.609 41 H -0.281 1.281 42 H -0.304 1.304 43 H 0.157 0.843 44 H 0.155 0.845 45 H 0.154 0.846 46 H 0.154 0.846 47 H 0.086 0.914 48 H 0.100 0.900 49 H 0.056 0.944 50 H 0.077 0.923 51 H 0.454 0.546 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.337 7.139 -5.759 9.269 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.007 3.993 3 N -0.303 5.303 4 C -0.058 4.058 5 C -0.011 4.011 6 H 0.129 0.871 7 C -0.138 4.138 8 C -0.158 4.158 9 C 0.043 3.957 10 H 0.078 0.922 11 N -0.357 5.357 12 C 0.297 3.703 13 O -0.450 6.450 14 C -0.040 4.040 15 O -0.229 6.229 16 C 0.079 3.921 17 C -0.174 4.174 18 C -0.183 4.183 19 O -0.365 6.365 20 Si 0.701 3.299 21 C -0.096 4.096 22 C -0.172 4.172 23 C -0.094 4.094 24 C -0.232 4.232 25 C -0.149 4.149 26 C -0.139 4.139 27 N -0.173 5.173 28 N -0.200 5.200 29 H 0.124 0.876 30 H 0.120 0.880 31 H 0.128 0.872 32 H 0.081 0.919 33 H 0.071 0.929 34 H 0.066 0.934 35 H 0.109 0.891 36 H 0.261 0.739 37 H 0.141 0.859 38 H 0.140 0.860 39 H 0.095 0.905 40 H 0.240 0.760 41 H -0.208 1.208 42 H -0.233 1.233 43 H 0.174 0.826 44 H 0.173 0.827 45 H 0.172 0.828 46 H 0.171 0.829 47 H 0.105 0.895 48 H 0.119 0.881 49 H 0.075 0.925 50 H 0.095 0.905 51 H 0.302 0.698 Dipole moment (debyes) X Y Z Total from point charges -1.179 5.919 -4.204 7.356 hybrid contribution -1.397 -0.636 -0.067 1.537 sum -2.576 5.283 -4.272 7.266 Atomic orbital electron populations 1.20641 0.80409 1.06553 1.05946 1.25228 0.98209 0.82226 0.93590 1.70399 1.01724 1.30993 1.27174 1.24564 0.93765 0.90340 0.97128 1.19679 0.87998 0.96883 0.96508 0.87096 1.21400 0.95856 0.99687 0.96847 1.21823 0.95566 1.00854 0.97534 1.20965 0.85026 0.93698 0.96018 0.92191 1.45706 1.12549 1.24493 1.52989 1.20583 0.84509 0.86610 0.78578 1.90782 1.83174 1.26856 1.44228 1.22706 0.85467 0.96649 0.99224 1.86191 1.21764 1.46019 1.68932 1.19129 0.85700 0.91265 0.95989 1.19857 0.94406 0.99080 1.04034 1.25207 1.09179 0.85335 0.98551 1.86546 1.44626 1.50032 1.55297 0.94052 0.83242 0.76117 0.76457 1.21112 0.95308 0.94806 0.98355 1.21456 1.00624 0.96143 0.98938 1.21418 0.91758 0.99903 0.96281 1.21590 1.01852 0.94630 1.05126 1.21727 0.95292 1.01559 0.96313 1.21437 0.96028 1.00018 0.96427 1.77929 0.98374 1.12927 1.28069 1.48006 1.03581 1.11033 1.57359 0.87554 0.87973 0.87187 0.91943 0.92944 0.93432 0.89057 0.73934 0.85931 0.86001 0.90495 0.76022 1.20776 1.23293 0.82560 0.82722 0.82806 0.82886 0.89526 0.88135 0.92516 0.90479 0.69824 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.57 10.51 71.24 0.75 1.32 16 2 C 0.29 0.67 8.24 138.23 1.14 1.81 16 3 N -0.57 -4.70 11.19 -179.73 -2.01 -6.71 16 4 C 0.22 1.86 6.65 138.63 0.92 2.79 16 5 C 0.01 0.03 2.66 -11.54 -0.03 0.00 16 6 H 0.11 0.07 8.14 -2.39 -0.02 0.05 16 7 C -0.10 -0.45 5.19 30.59 0.16 -0.29 16 8 C -0.12 -0.27 5.50 30.60 0.17 -0.10 16 9 C 0.15 0.16 2.45 44.99 0.11 0.27 16 10 H 0.06 0.50 7.57 -2.39 -0.02 0.48 16 11 N -0.70 1.36 5.08 -442.54 -2.25 -0.89 16 12 C 0.51 3.15 7.87 87.66 0.69 3.84 16 13 O -0.57 -10.86 16.16 16.00 0.26 -10.60 16 14 C 0.04 0.01 5.22 71.23 0.37 0.38 16 15 O -0.32 -3.18 9.00 -73.38 -0.66 -3.84 16 16 C 0.12 0.75 6.66 22.51 0.15 0.90 16 17 C -0.17 -0.92 5.27 -19.77 -0.10 -1.02 16 18 C -0.07 -0.60 2.38 71.24 0.17 -0.43 16 19 O -0.56 -5.42 12.88 -148.98 -1.92 -7.34 16 20 Si 0.80 1.93 29.93 68.60 2.05 3.98 16 21 C -0.08 0.06 8.66 22.26 0.19 0.25 16 22 C -0.15 0.49 10.04 22.28 0.22 0.72 16 23 C -0.08 0.25 10.04 22.25 0.22 0.48 16 24 C -0.21 0.17 9.04 22.37 0.20 0.37 16 25 C -0.11 0.48 5.39 30.59 0.16 0.65 16 26 C -0.10 -0.04 5.18 30.59 0.16 0.12 16 27 N -0.34 -3.23 12.80 -51.33 -0.66 -3.88 16 28 N -0.48 -1.30 7.45 -50.71 -0.38 -1.68 16 29 H 0.11 -1.01 8.14 -2.39 -0.02 -1.03 16 30 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 31 H 0.11 -1.37 8.14 -2.38 -0.02 -1.39 16 32 H 0.06 0.35 8.14 -2.38 -0.02 0.33 16 33 H 0.05 0.46 8.14 -2.38 -0.02 0.44 16 34 H 0.05 0.37 8.14 -2.39 -0.02 0.35 16 35 H 0.09 -0.20 8.14 -2.39 -0.02 -0.21 16 36 H 0.42 -4.45 8.60 -92.71 -0.80 -5.25 16 37 H 0.12 -0.76 7.66 -2.39 -0.02 -0.78 16 38 H 0.12 -0.77 7.66 -2.39 -0.02 -0.79 16 39 H 0.08 1.10 7.83 -2.38 -0.02 1.08 16 40 H 0.39 -0.18 8.70 -74.06 -0.64 -0.82 16 41 H -0.28 -1.73 7.11 99.48 0.71 -1.02 16 42 H -0.30 -3.19 7.11 99.48 0.71 -2.48 16 43 H 0.16 -0.99 5.14 -2.91 -0.01 -1.00 16 44 H 0.16 -1.31 8.06 -2.91 -0.02 -1.33 16 45 H 0.15 -1.35 8.06 -2.91 -0.02 -1.37 16 46 H 0.15 -1.05 6.30 -2.91 -0.02 -1.07 16 47 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 48 H 0.10 -0.90 8.14 -2.38 -0.02 -0.92 16 49 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 50 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 51 H 0.45 -1.96 8.96 -213.09 -1.91 -3.88 16 Total: 0.00 -38.37 417.88 -2.23 -40.60 By element: Atomic # 1 Polarization: -19.36 SS G_CDS: -2.32 Total: -21.69 kcal Atomic # 6 Polarization: 6.38 SS G_CDS: 5.66 Total: 12.04 kcal Atomic # 7 Polarization: -7.87 SS G_CDS: -5.29 Total: -13.16 kcal Atomic # 8 Polarization: -19.46 SS G_CDS: -2.32 Total: -21.78 kcal Atomic # 14 Polarization: 1.93 SS G_CDS: 2.05 Total: 3.98 kcal Total: -38.37 -2.23 -40.60 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608548_2989392.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.280 kcal (2) G-P(sol) polarization free energy of solvation -38.373 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds