Wall clock time and date at job start Sun Mar 7 2021 02:42:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30838 * 125.95753 * 2 1 4 4 C 1.33243 * 109.82817 * 180.02562 * 3 2 1 5 5 C 1.50699 * 125.52595 * 180.02562 * 4 3 2 6 6 H 1.09000 * 109.47247 * 359.97438 * 5 4 3 7 7 C 1.52997 * 109.47265 * 120.00182 * 5 4 3 8 8 C 1.52999 * 109.47592 * 180.02562 * 7 5 4 9 9 C 1.53006 * 109.46626 * 300.00035 * 8 7 5 10 10 H 1.09000 * 109.47050 * 299.99699 * 9 8 7 11 11 N 1.46500 * 109.46998 * 179.97438 * 9 8 7 12 12 C 1.34775 * 120.00366 * 154.99756 * 11 9 8 13 13 O 1.21282 * 119.99750 * 0.02562 * 12 11 9 14 14 C 1.50699 * 120.00244 * 180.02562 * 12 11 9 15 15 C 1.53004 * 109.46887 * 180.02562 * 14 12 11 16 16 O 1.42897 * 109.46814 * 179.97438 * 15 14 12 17 17 C 1.35904 * 117.00196 * 179.97438 * 16 15 14 18 18 C 1.38701 * 120.05927 * 180.02562 * 17 16 15 19 19 C 1.38168 * 119.94511 * 180.02562 * 18 17 16 20 20 C 1.50701 * 119.97158 * 179.97438 * 19 18 17 21 21 O 1.42894 * 109.47158 * 65.00120 * 20 19 18 22 22 Si 1.86304 * 109.47087 * 185.00016 * 20 19 18 23 23 C 1.38246 * 120.05503 * 0.02562 * 19 18 17 24 24 C 1.38292 * 120.10875 * 359.97438 * 23 19 18 25 25 C 1.38120 * 120.05707 * 359.76480 * 24 23 19 26 26 C 1.52997 * 109.47164 * 59.99702 * 9 8 7 27 27 C 1.52996 * 109.46861 * 240.00162 * 5 4 3 28 28 N 1.30709 * 108.94303 * 0.26394 * 4 3 2 29 29 N 1.34427 * 125.96773 * 180.02562 * 2 1 3 30 30 H 1.09004 * 109.46987 * 90.00491 * 1 2 3 31 31 H 1.09004 * 109.47012 * 209.99357 * 1 2 3 32 32 H 1.08997 * 109.47395 * 329.99976 * 1 2 3 33 33 H 1.09000 * 109.47140 * 59.99748 * 7 5 4 34 34 H 1.09002 * 109.47045 * 299.99841 * 7 5 4 35 35 H 1.08993 * 109.47839 * 180.02562 * 8 7 5 36 36 H 1.09000 * 109.47160 * 59.99666 * 8 7 5 37 37 H 0.97001 * 119.99882 * 334.99950 * 11 9 8 38 38 H 1.08996 * 109.46708 * 300.00131 * 14 12 11 39 39 H 1.09001 * 109.46991 * 60.00072 * 14 12 11 40 40 H 1.08999 * 109.46835 * 299.99964 * 15 14 12 41 41 H 1.09000 * 109.46654 * 60.00342 * 15 14 12 42 42 H 1.07997 * 120.02972 * 0.02562 * 18 17 16 43 43 H 1.08997 * 109.47630 * 304.99921 * 20 19 18 44 44 H 0.96700 * 114.00129 * 179.97438 * 21 20 19 45 45 H 1.48493 * 109.99936 * 178.68133 * 22 20 19 46 46 H 1.48500 * 109.99893 * 300.00489 * 22 20 19 47 47 H 1.07996 * 119.94099 * 180.02562 * 23 19 18 48 48 H 1.08001 * 119.96501 * 180.02562 * 24 23 19 49 49 H 1.07999 * 120.02860 * 180.27807 * 25 24 23 50 50 H 1.09000 * 109.47140 * 60.00051 * 26 9 8 51 51 H 1.09001 * 109.47230 * 179.97438 * 26 9 8 52 52 H 1.08992 * 109.47534 * 60.00272 * 27 5 4 53 53 H 1.08996 * 109.47134 * 299.99466 * 27 5 4 54 54 H 0.97005 * 126.81704 * 359.97438 * 29 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2752 1.0591 0.0000 4 6 3.5552 0.6889 -0.0006 5 6 4.7371 1.6238 -0.0002 6 1 4.3846 2.6552 0.0001 7 6 5.5849 1.3737 1.2486 8 6 6.7846 2.3233 1.2494 9 6 7.6319 2.0755 -0.0003 10 1 7.9848 1.0442 -0.0013 11 7 8.7802 2.9851 0.0000 12 6 9.9020 2.6546 -0.6699 13 8 9.9606 1.6042 -1.2735 14 6 11.0835 3.5901 -0.6691 15 6 12.2165 2.9813 -1.4978 16 8 13.3366 3.8687 -1.4975 17 6 14.4360 3.4748 -2.1926 18 6 15.5594 4.2872 -2.2343 19 6 16.6756 3.8847 -2.9422 20 6 17.8964 4.7671 -2.9884 21 8 18.4527 4.8796 -1.6770 22 14 19.1593 4.0204 -4.1367 23 6 16.6731 2.6736 -3.6090 24 6 15.5542 1.8619 -3.5689 25 6 14.4378 2.2573 -2.8582 26 6 6.7841 2.3256 -1.2491 27 6 5.5842 1.3754 -1.2498 28 7 3.6194 -0.6166 -0.0066 29 7 2.2965 -1.0880 -0.0005 30 1 -0.3633 -0.0001 -1.0277 31 1 -0.3633 -0.8901 0.5138 32 1 -0.3634 0.8899 0.5138 33 1 5.9375 0.3423 1.2478 34 1 4.9814 1.5507 2.1389 35 1 7.3888 2.1448 2.1388 36 1 6.4316 3.3546 1.2504 37 1 8.7333 3.8253 0.4825 38 1 10.7901 4.5462 -1.1023 39 1 11.4241 3.7443 0.3548 40 1 12.5099 2.0250 -1.0649 41 1 11.8755 2.8276 -2.5216 42 1 15.5618 5.2335 -1.7140 43 1 17.6163 5.7563 -3.3504 44 1 19.2435 5.4343 -1.6315 45 1 20.3551 4.8972 -4.2157 46 1 19.5495 2.6713 -3.6543 47 1 17.5468 2.3607 -4.1614 48 1 15.5550 0.9161 -4.0904 49 1 13.5659 1.6210 -2.8235 50 1 6.4311 3.3569 -1.2481 51 1 7.3878 2.1495 -2.1394 52 1 4.9803 1.5536 -2.1395 53 1 5.9368 0.3441 -1.2506 54 1 2.0094 -2.0146 -0.0006 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608548_4549614.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:42:02 Heat of formation + Delta-G solvation = -9.167323 kcal Electronic energy + Delta-G solvation = -34030.659832 eV Core-core repulsion = 29356.281054 eV Total energy + Delta-G solvation = -4674.378778 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.199 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -43.23782 -41.44525 -41.00785 -39.43403 -38.96214 -37.45036 -35.77261 -33.89736 -33.38816 -33.21249 -32.61487 -31.86839 -31.09333 -30.29739 -28.69560 -27.05266 -25.73463 -24.26623 -23.82476 -23.67373 -22.38923 -21.92173 -21.47241 -21.34804 -20.53254 -19.16501 -18.89761 -18.57153 -17.87480 -17.58960 -17.46844 -17.22908 -16.90988 -16.75218 -16.24437 -16.02523 -15.81268 -15.61095 -15.33695 -15.18595 -14.95531 -14.75227 -14.55917 -14.47169 -14.17496 -14.01072 -13.97414 -13.86962 -13.67010 -13.52326 -13.42848 -13.25391 -12.94716 -12.93183 -12.85313 -12.35949 -12.32050 -12.26614 -12.16953 -11.98808 -11.81503 -11.67299 -11.65264 -11.46272 -11.10477 -11.05882 -10.97923 -10.53793 -10.47372 -10.09910 -9.93546 -9.28335 -4.90962 0.18322 0.38086 0.54591 1.28321 1.54640 1.61045 1.68245 1.71864 1.77833 1.95443 2.47674 2.61353 2.92999 3.38081 3.49107 3.57183 3.65729 3.69492 3.75991 3.80497 3.83875 3.90082 3.99401 4.07603 4.09479 4.18592 4.20293 4.22253 4.24853 4.34129 4.37143 4.40447 4.45265 4.48275 4.61510 4.62306 4.65657 4.66919 4.69025 4.77610 4.81495 4.96538 5.01375 5.02019 5.02660 5.08290 5.12201 5.22321 5.23773 5.26034 5.34269 5.36526 5.39830 5.44272 5.51309 5.68232 6.14941 6.31948 6.50490 6.58565 7.04804 7.19694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.285 3.715 3 N -0.573 5.573 4 C 0.225 3.775 5 C 0.009 3.991 6 H 0.108 0.892 7 C -0.099 4.099 8 C -0.113 4.113 9 C 0.146 3.854 10 H 0.064 0.936 11 N -0.710 5.710 12 C 0.520 3.480 13 O -0.584 6.584 14 C -0.132 4.132 15 C 0.073 3.927 16 O -0.323 6.323 17 C 0.118 3.882 18 C -0.141 4.141 19 C -0.047 4.047 20 C -0.090 4.090 21 O -0.558 6.558 22 Si 0.771 3.229 23 C -0.161 4.161 24 C -0.076 4.076 25 C -0.212 4.212 26 C -0.119 4.119 27 C -0.098 4.098 28 N -0.342 5.342 29 N -0.480 5.480 30 H 0.106 0.894 31 H 0.109 0.891 32 H 0.101 0.899 33 H 0.058 0.942 34 H 0.073 0.927 35 H 0.084 0.916 36 H 0.095 0.905 37 H 0.420 0.580 38 H 0.128 0.872 39 H 0.125 0.875 40 H 0.062 0.938 41 H 0.067 0.933 42 H 0.131 0.869 43 H 0.097 0.903 44 H 0.396 0.604 45 H -0.283 1.283 46 H -0.298 1.298 47 H 0.144 0.856 48 H 0.153 0.847 49 H 0.138 0.862 50 H 0.086 0.914 51 H 0.053 0.947 52 H 0.062 0.938 53 H 0.055 0.945 54 H 0.453 0.547 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.432 2.874 -0.123 6.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.008 3.992 3 N -0.304 5.304 4 C -0.058 4.058 5 C -0.012 4.012 6 H 0.126 0.874 7 C -0.139 4.139 8 C -0.151 4.151 9 C 0.041 3.959 10 H 0.083 0.917 11 N -0.362 5.362 12 C 0.307 3.693 13 O -0.464 6.464 14 C -0.172 4.172 15 C -0.002 4.002 16 O -0.237 6.237 17 C 0.073 3.927 18 C -0.160 4.160 19 C -0.047 4.047 20 C -0.198 4.198 21 O -0.369 6.369 22 Si 0.676 3.324 23 C -0.178 4.178 24 C -0.093 4.093 25 C -0.230 4.230 26 C -0.157 4.157 27 C -0.137 4.137 28 N -0.172 5.172 29 N -0.200 5.200 30 H 0.125 0.875 31 H 0.128 0.872 32 H 0.119 0.881 33 H 0.077 0.923 34 H 0.091 0.909 35 H 0.102 0.898 36 H 0.114 0.886 37 H 0.258 0.742 38 H 0.146 0.854 39 H 0.143 0.857 40 H 0.080 0.920 41 H 0.085 0.915 42 H 0.149 0.851 43 H 0.115 0.885 44 H 0.246 0.754 45 H -0.210 1.210 46 H -0.225 1.225 47 H 0.161 0.839 48 H 0.171 0.829 49 H 0.156 0.844 50 H 0.105 0.895 51 H 0.072 0.928 52 H 0.080 0.920 53 H 0.073 0.927 54 H 0.302 0.698 Dipole moment (debyes) X Y Z Total from point charges -4.583 1.584 -0.362 4.863 hybrid contribution -0.024 -0.270 1.091 1.124 sum -4.607 1.314 0.729 4.846 Atomic orbital electron populations 1.20639 0.80494 1.06517 1.05950 1.25204 0.98172 0.82242 0.93623 1.70402 1.01793 1.31016 1.27166 1.24575 0.93746 0.90364 0.97115 1.19683 0.88054 0.96733 0.96691 0.87402 1.21427 0.95977 1.00068 0.96380 1.21728 0.95471 1.01300 0.96618 1.20949 0.85311 0.93930 0.95687 0.91726 1.45895 1.13281 1.24177 1.52814 1.20625 0.84402 0.86425 0.77849 1.90742 1.83513 1.27024 1.45086 1.21439 0.91236 1.00051 1.04447 1.22451 0.84301 0.92311 1.01136 1.85946 1.22278 1.47028 1.68472 1.19112 0.87191 0.93703 0.92741 1.20342 0.91330 1.01261 1.03081 1.19285 0.93673 0.94955 0.96761 1.25103 0.99696 1.03686 0.91277 1.86553 1.48109 1.74340 1.27858 0.93969 0.76431 0.76095 0.85937 1.21163 0.99877 0.94269 1.02511 1.21222 0.91548 1.00002 0.96568 1.21552 1.01552 0.97004 1.02922 1.21830 0.95550 1.00579 0.97769 1.21406 0.95923 0.99838 0.96560 1.77914 0.98319 1.12857 1.28067 1.48004 1.03607 1.11011 1.57352 0.87525 0.87204 0.88052 0.92328 0.90856 0.89777 0.88623 0.74247 0.85353 0.85656 0.91972 0.91508 0.85142 0.88536 0.75382 1.21007 1.22529 0.83880 0.82898 0.84441 0.89508 0.92776 0.91971 0.92659 0.69826 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.61 10.51 71.24 0.75 1.36 16 2 C 0.29 0.49 8.24 138.22 1.14 1.63 16 3 N -0.57 -4.37 11.19 -179.73 -2.01 -6.38 16 4 C 0.22 1.67 6.65 138.63 0.92 2.60 16 5 C 0.01 0.02 2.66 -11.54 -0.03 -0.01 16 6 H 0.11 0.04 8.14 -2.39 -0.02 0.02 16 7 C -0.10 0.03 5.18 30.59 0.16 0.19 16 8 C -0.11 0.55 5.39 30.60 0.16 0.71 16 9 C 0.15 -0.12 2.45 44.99 0.11 -0.01 16 10 H 0.06 0.34 7.58 -2.39 -0.02 0.32 16 11 N -0.71 2.57 5.08 -442.53 -2.25 0.32 16 12 C 0.52 0.89 7.79 87.66 0.68 1.58 16 13 O -0.58 -6.50 15.65 -3.04 -0.05 -6.55 16 14 C -0.13 0.39 6.07 29.85 0.18 0.57 16 15 C 0.07 0.21 4.03 71.98 0.29 0.50 16 16 O -0.32 -2.00 10.14 -92.47 -0.94 -2.94 16 17 C 0.12 0.89 6.69 22.50 0.15 1.04 16 18 C -0.14 -1.05 9.62 22.36 0.22 -0.83 16 19 C -0.05 -0.25 5.38 -19.88 -0.11 -0.35 16 20 C -0.09 -0.12 2.79 71.24 0.20 0.08 16 21 O -0.56 -2.30 12.81 -148.98 -1.91 -4.21 16 22 Si 0.77 -0.78 29.85 68.60 2.05 1.27 16 23 C -0.16 -0.56 8.67 22.28 0.19 -0.37 16 24 C -0.08 -0.24 10.04 22.25 0.22 -0.02 16 25 C -0.21 -1.17 9.04 22.37 0.20 -0.97 16 26 C -0.12 -0.03 5.49 30.61 0.17 0.14 16 27 C -0.10 -0.27 5.19 30.61 0.16 -0.11 16 28 N -0.34 -2.84 12.80 -51.34 -0.66 -3.49 16 29 N -0.48 -0.89 7.45 -50.71 -0.38 -1.27 16 30 H 0.11 -1.07 8.14 -2.38 -0.02 -1.09 16 31 H 0.11 -1.41 8.14 -2.38 -0.02 -1.43 16 32 H 0.10 -0.77 8.14 -2.39 -0.02 -0.79 16 33 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 34 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 35 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 37 H 0.42 -4.37 8.60 -92.71 -0.80 -5.16 16 38 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 39 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 40 H 0.06 0.29 7.61 -2.39 -0.02 0.27 16 41 H 0.07 0.26 7.63 -2.39 -0.02 0.24 16 42 H 0.13 0.86 8.06 -2.91 -0.02 0.84 16 43 H 0.10 -0.26 7.96 -2.39 -0.02 -0.28 16 44 H 0.40 -1.76 8.74 -74.06 -0.65 -2.41 16 45 H -0.28 -0.71 7.11 99.48 0.71 0.00 16 46 H -0.30 -1.82 7.05 99.48 0.70 -1.12 16 47 H 0.14 -0.07 4.86 -2.91 -0.01 -0.08 16 48 H 0.15 -0.31 8.06 -2.91 -0.02 -0.33 16 49 H 0.14 0.52 6.30 -2.91 -0.02 0.50 16 50 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 51 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 52 H 0.06 0.24 8.14 -2.39 -0.02 0.23 16 53 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 54 H 0.45 -2.35 8.96 -213.10 -1.91 -4.26 16 Total: 0.00 -30.01 439.34 -2.74 -32.75 By element: Atomic # 1 Polarization: -14.85 SS G_CDS: -2.37 Total: -17.22 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: 5.77 Total: 7.73 kcal Atomic # 7 Polarization: -5.53 SS G_CDS: -5.29 Total: -10.82 kcal Atomic # 8 Polarization: -10.81 SS G_CDS: -2.89 Total: -13.70 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: 2.05 Total: 1.27 kcal Total: -30.01 -2.74 -32.75 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608548_4549614.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.586 kcal (2) G-P(sol) polarization free energy of solvation -30.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.428 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.739 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds