Wall clock time and date at job start Sun Mar 7 2021 02:42:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30833 * 125.96362 * 2 1 4 4 C 1.33243 * 109.83033 * 180.19606 * 3 2 1 5 5 C 1.50699 * 125.52786 * 179.85839 * 4 3 2 6 6 H 1.09002 * 109.46959 * 359.71731 * 5 4 3 7 7 C 1.53005 * 109.47155 * 119.71423 * 5 4 3 8 8 C 1.52999 * 109.47159 * 179.97438 * 7 5 4 9 9 C 1.52997 * 109.47317 * 300.00546 * 8 7 5 10 10 H 1.09002 * 109.47153 * 299.99641 * 9 8 7 11 11 N 1.46500 * 109.47007 * 179.97438 * 9 8 7 12 12 C 1.34779 * 119.99793 * 154.99772 * 11 9 8 13 13 O 1.21279 * 120.00185 * 0.02562 * 12 11 9 14 14 C 1.50702 * 119.99614 * 179.97438 * 12 11 9 15 15 O 1.42900 * 109.46704 * 180.02562 * 14 12 11 16 16 C 1.35904 * 116.99631 * 180.02562 * 15 14 12 17 17 C 1.38715 * 120.05411 * 180.02562 * 16 15 14 18 18 C 1.38160 * 119.94334 * 180.02562 * 17 16 15 19 19 C 1.50707 * 119.97294 * 179.97438 * 18 17 16 20 20 O 1.42901 * 109.47153 * 300.00674 * 19 18 17 21 21 Si 1.86294 * 109.47131 * 179.97438 * 19 18 17 22 22 C 1.38246 * 120.05964 * 0.02562 * 18 17 16 23 23 C 1.38286 * 120.10862 * 0.02562 * 22 18 17 24 24 C 1.38129 * 120.05519 * 359.67645 * 23 22 18 25 25 C 1.53000 * 109.47060 * 59.99960 * 9 8 7 26 26 C 1.52997 * 109.47078 * 239.71820 * 5 4 3 27 27 N 1.30719 * 108.94719 * 359.59249 * 4 3 2 28 28 N 1.34439 * 125.96100 * 179.76237 * 2 1 3 29 29 H 1.08994 * 109.47229 * 270.26524 * 1 2 3 30 30 H 1.09001 * 109.47257 * 30.26627 * 1 2 3 31 31 H 1.09003 * 109.47044 * 150.26609 * 1 2 3 32 32 H 1.09002 * 109.46935 * 60.00293 * 7 5 4 33 33 H 1.09000 * 109.47360 * 300.00319 * 7 5 4 34 34 H 1.08996 * 109.46929 * 179.97438 * 8 7 5 35 35 H 1.09002 * 109.46716 * 60.00455 * 8 7 5 36 36 H 0.97004 * 120.00223 * 334.99863 * 11 9 8 37 37 H 1.09002 * 109.47423 * 300.00169 * 14 12 11 38 38 H 1.09002 * 109.46795 * 60.00420 * 14 12 11 39 39 H 1.08002 * 120.02700 * 359.97438 * 17 16 15 40 40 H 1.09001 * 109.46564 * 60.00243 * 19 18 17 41 41 H 0.96704 * 113.99540 * 299.99103 * 20 19 18 42 42 H 1.48504 * 110.00168 * 58.68635 * 21 19 18 43 43 H 1.48507 * 110.00014 * 180.02562 * 21 19 18 44 44 H 1.07996 * 119.94427 * 179.97438 * 22 18 17 45 45 H 1.08003 * 119.97354 * 179.97438 * 23 22 18 46 46 H 1.07998 * 120.02795 * 180.32317 * 24 23 22 47 47 H 1.08992 * 109.47399 * 59.99823 * 25 9 8 48 48 H 1.09004 * 109.46724 * 180.02562 * 25 9 8 49 49 H 1.09002 * 109.46695 * 299.99519 * 26 5 4 50 50 H 1.08993 * 109.47194 * 59.99505 * 26 5 4 51 51 H 0.96992 * 126.81952 * 359.91924 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0590 0.0000 4 6 3.5553 0.6887 -0.0043 5 6 4.7373 1.6235 -0.0087 6 1 4.3847 2.6549 -0.0129 7 6 5.5852 1.3795 1.2413 8 6 6.7856 2.3281 1.2365 9 6 7.6323 2.0730 -0.0120 10 1 7.9845 1.0414 -0.0076 11 7 8.7813 2.9818 -0.0169 12 6 9.9027 2.6467 -0.6854 13 8 9.9603 1.5931 -1.2833 14 6 11.0844 3.5818 -0.6908 15 8 12.1421 3.0083 -1.4618 16 6 13.2892 3.7292 -1.5679 17 6 14.3564 3.2326 -2.3019 18 6 15.5218 3.9672 -2.4078 19 6 16.6818 3.4281 -3.2046 20 8 17.1071 2.1841 -2.6446 21 14 18.0900 4.6467 -3.1534 22 6 15.6250 5.1959 -1.7827 23 6 14.5629 5.6927 -1.0495 24 6 13.3935 4.9649 -0.9457 25 6 6.7844 2.3171 -1.2619 26 6 5.5842 1.3689 -1.2572 27 7 3.6195 -0.6169 0.0017 28 7 2.2964 -1.0882 0.0045 29 1 -0.3633 0.0048 1.0276 30 1 -0.3634 0.8876 -0.5180 31 1 -0.3633 -0.8924 -0.5097 32 1 5.9377 0.3481 1.2455 33 1 4.9818 1.5609 2.1308 34 1 7.3893 2.1546 2.1272 35 1 6.4334 3.3597 1.2321 36 1 8.7352 3.8246 0.4611 37 1 10.7912 4.5355 -1.1297 38 1 11.4256 3.7421 0.3320 39 1 14.2767 2.2722 -2.7894 40 1 16.3723 3.2743 -4.2383 41 1 17.3973 2.2458 -1.7242 42 1 18.5005 4.8898 -1.7471 43 1 19.2401 4.1270 -3.9361 44 1 16.5369 5.7684 -1.8663 45 1 14.6461 6.6527 -0.5617 46 1 12.5625 5.3557 -0.3773 47 1 6.4322 3.3485 -1.2664 48 1 7.3875 2.1348 -2.1514 49 1 5.9367 0.3375 -1.2529 50 1 4.9801 1.5427 -2.1476 51 1 2.0093 -2.0146 0.0094 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15608548_4860298.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:42:59 Heat of formation + Delta-G solvation = 0.804931 kcal Electronic energy + Delta-G solvation = -32402.172152 eV Core-core repulsion = 27883.763423 eV Total energy + Delta-G solvation = -4518.408730 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -43.15085 -41.56755 -40.83548 -39.46028 -38.70370 -37.27715 -35.71560 -33.79871 -33.32545 -32.48909 -31.88778 -31.84791 -30.86327 -29.15324 -28.47328 -26.78980 -24.70405 -23.83672 -23.67279 -22.71269 -22.20424 -21.49066 -21.39968 -20.52894 -19.32870 -18.87115 -18.48182 -17.84009 -17.43509 -17.27301 -17.04769 -16.80469 -16.68657 -16.20926 -16.11753 -15.61534 -15.46590 -15.29720 -15.10344 -15.01181 -14.77681 -14.65605 -14.20537 -14.11244 -14.09179 -13.90324 -13.79314 -13.65258 -13.40595 -13.25948 -12.97425 -12.86396 -12.56082 -12.33901 -12.26961 -12.17382 -12.13558 -11.98594 -11.63887 -11.57836 -11.44364 -10.97405 -10.94970 -10.82131 -10.63144 -10.38316 -10.12059 -9.92756 -9.26329 -4.93811 0.19927 0.40571 0.61743 1.26989 1.47840 1.52498 1.62275 1.65971 1.89123 1.98437 2.55555 2.66567 2.90548 3.39357 3.44251 3.54721 3.61928 3.63383 3.65666 3.74876 3.78577 3.88492 3.90509 4.01666 4.03146 4.12184 4.18777 4.19488 4.32471 4.33808 4.36940 4.39306 4.43010 4.48520 4.55491 4.64016 4.66215 4.70994 4.76400 4.95754 4.97157 5.02190 5.09198 5.13574 5.23294 5.24639 5.28775 5.34511 5.35214 5.41611 5.43920 5.52249 5.65158 6.06290 6.26256 6.41156 6.43203 7.13218 7.14049 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C 0.284 3.716 3 N -0.540 5.540 4 C 0.235 3.765 5 C 0.007 3.993 6 H 0.100 0.900 7 C -0.106 4.106 8 C -0.124 4.124 9 C 0.146 3.854 10 H 0.093 0.907 11 N -0.724 5.724 12 C 0.516 3.484 13 O -0.510 6.510 14 C 0.040 3.960 15 O -0.288 6.288 16 C 0.129 3.871 17 C -0.121 4.121 18 C -0.078 4.078 19 C -0.078 4.078 20 O -0.527 6.527 21 Si 0.690 3.310 22 C -0.154 4.154 23 C -0.073 4.073 24 C -0.206 4.206 25 C -0.128 4.128 26 C -0.107 4.107 27 N -0.309 5.309 28 N -0.484 5.484 29 H 0.093 0.907 30 H 0.099 0.901 31 H 0.084 0.916 32 H 0.075 0.925 33 H 0.072 0.928 34 H 0.075 0.925 35 H 0.074 0.926 36 H 0.402 0.598 37 H 0.095 0.905 38 H 0.094 0.906 39 H 0.136 0.864 40 H 0.121 0.879 41 H 0.376 0.624 42 H -0.260 1.260 43 H -0.257 1.257 44 H 0.130 0.870 45 H 0.131 0.869 46 H 0.130 0.870 47 H 0.069 0.931 48 H 0.073 0.927 49 H 0.074 0.926 50 H 0.069 0.931 51 H 0.441 0.559 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.971 5.550 3.229 8.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C 0.006 3.994 3 N -0.269 5.269 4 C -0.048 4.048 5 C -0.015 4.015 6 H 0.118 0.882 7 C -0.145 4.145 8 C -0.162 4.162 9 C 0.042 3.958 10 H 0.111 0.889 11 N -0.378 5.378 12 C 0.300 3.700 13 O -0.384 6.384 14 C -0.039 4.039 15 O -0.200 6.200 16 C 0.084 3.916 17 C -0.140 4.140 18 C -0.079 4.079 19 C -0.187 4.187 20 O -0.334 6.334 21 Si 0.591 3.409 22 C -0.172 4.172 23 C -0.091 4.091 24 C -0.225 4.225 25 C -0.166 4.166 26 C -0.146 4.146 27 N -0.138 5.138 28 N -0.202 5.202 29 H 0.112 0.888 30 H 0.118 0.882 31 H 0.103 0.897 32 H 0.093 0.907 33 H 0.091 0.909 34 H 0.094 0.906 35 H 0.092 0.908 36 H 0.236 0.764 37 H 0.113 0.887 38 H 0.112 0.888 39 H 0.154 0.846 40 H 0.139 0.861 41 H 0.224 0.776 42 H -0.185 1.185 43 H -0.182 1.182 44 H 0.147 0.853 45 H 0.149 0.851 46 H 0.148 0.852 47 H 0.088 0.912 48 H 0.092 0.908 49 H 0.093 0.907 50 H 0.088 0.912 51 H 0.287 0.713 Dipole moment (debyes) X Y Z Total from point charges -3.715 4.466 2.340 6.262 hybrid contribution -0.661 -0.887 1.301 1.708 sum -4.375 3.578 3.642 6.724 Atomic orbital electron populations 1.20431 0.83478 1.05223 1.04772 1.24451 0.96718 0.82844 0.95436 1.70391 1.01389 1.29560 1.25564 1.24170 0.93081 0.90127 0.97435 1.19627 0.88556 0.96798 0.96474 0.88189 1.21502 0.95511 1.00541 0.96917 1.21791 0.96478 1.00649 0.97251 1.21077 0.84677 0.94959 0.95119 0.88911 1.45896 1.14027 1.23727 1.54119 1.20027 0.83372 0.87181 0.79399 1.90794 1.81943 1.23961 1.41668 1.22480 0.87031 0.96769 0.97582 1.86180 1.21111 1.44532 1.68214 1.19048 0.86201 0.90653 0.95711 1.20275 0.90761 1.01620 1.01309 1.20099 0.95223 0.94574 0.97967 1.25108 1.00824 0.93105 0.99672 1.86621 1.85412 1.29454 1.31880 0.94933 0.77724 0.85338 0.82925 1.20938 0.99685 0.96164 1.00365 1.20905 0.92007 0.99320 0.96859 1.21302 1.00354 0.95549 1.05261 1.21908 0.96289 1.00025 0.98399 1.21508 0.95669 1.00715 0.96668 1.78005 0.96572 1.12380 1.26832 1.48038 1.04367 1.10165 1.57622 0.88818 0.88192 0.89713 0.90658 0.90938 0.90610 0.90765 0.76397 0.88726 0.88826 0.84607 0.86139 0.77608 1.18475 1.18199 0.85311 0.85091 0.85226 0.91221 0.90786 0.90737 0.91183 0.71350 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.27 10.51 36.00 0.38 0.65 16 2 C 0.28 0.23 8.24 -155.69 -1.28 -1.05 16 3 N -0.54 -1.86 11.19 -8.16 -0.09 -1.96 16 4 C 0.23 0.73 6.65 -156.85 -1.04 -0.31 16 5 C 0.01 0.00 2.66 -91.77 -0.24 -0.24 16 6 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 7 C -0.11 0.06 5.19 -26.73 -0.14 -0.08 16 8 C -0.12 0.29 5.39 -26.73 -0.14 0.15 16 9 C 0.15 -0.09 2.45 -67.93 -0.17 -0.26 16 10 H 0.09 0.17 7.58 -51.93 -0.39 -0.22 16 11 N -0.72 1.21 5.08 -53.81 -0.27 0.93 16 12 C 0.52 0.80 7.87 -10.98 -0.09 0.72 16 13 O -0.51 -3.43 16.16 -14.35 -0.23 -3.66 16 14 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 15 O -0.29 -0.95 9.67 -39.35 -0.38 -1.33 16 16 C 0.13 0.28 6.69 -39.22 -0.26 0.02 16 17 C -0.12 -0.31 9.55 -39.43 -0.38 -0.69 16 18 C -0.08 -0.08 5.39 -104.64 -0.56 -0.64 16 19 C -0.08 -0.04 2.82 36.01 0.10 0.06 16 20 O -0.53 -1.12 12.77 -35.23 -0.45 -1.57 16 21 Si 0.69 -0.50 29.79 -169.99 -5.06 -5.56 16 22 C -0.15 0.04 8.67 -39.56 -0.34 -0.30 16 23 C -0.07 0.06 10.04 -39.60 -0.40 -0.34 16 24 C -0.21 0.05 9.04 -39.43 -0.36 -0.31 16 25 C -0.13 0.02 5.49 -26.75 -0.15 -0.12 16 26 C -0.11 -0.07 5.18 -26.76 -0.14 -0.21 16 27 N -0.31 -1.07 12.80 32.42 0.41 -0.66 16 28 N -0.48 -0.33 7.45 32.62 0.24 -0.09 16 29 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 30 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 31 H 0.08 -0.46 8.14 -51.93 -0.42 -0.89 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 33 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 35 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 36 H 0.40 -2.02 8.60 -40.82 -0.35 -2.37 16 37 H 0.09 -0.32 7.66 -51.93 -0.40 -0.72 16 38 H 0.09 -0.31 7.67 -51.93 -0.40 -0.70 16 39 H 0.14 0.45 8.06 -52.49 -0.42 0.03 16 40 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 41 H 0.38 -0.30 8.70 45.56 0.40 0.10 16 42 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 43 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 44 H 0.13 -0.27 4.87 -52.49 -0.26 -0.53 16 45 H 0.13 -0.41 8.06 -52.48 -0.42 -0.83 16 46 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 47 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 48 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 49 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 50 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 51 H 0.44 -1.18 8.96 -182.34 -1.63 -2.82 16 LS Contribution 418.27 15.07 6.30 6.30 Total: 0.00 -12.76 418.27 -13.45 -26.20 By element: Atomic # 1 Polarization: -6.93 SS G_CDS: -8.89 Total: -15.83 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -5.02 Total: -2.79 kcal Atomic # 7 Polarization: -2.06 SS G_CDS: 0.29 Total: -1.77 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -1.06 Total: -6.56 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.06 Total: -5.56 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -12.76 -13.45 -26.20 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608548_4860298.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.007 kcal (2) G-P(sol) polarization free energy of solvation -12.756 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.251 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.446 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.202 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds