Wall clock time and date at job start Sun Mar 7 2021 02:42:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30833 * 125.96362 * 2 1 4 4 C 1.33243 * 109.83033 * 180.19606 * 3 2 1 5 5 C 1.50699 * 125.52786 * 179.85839 * 4 3 2 6 6 H 1.09002 * 109.46959 * 359.71731 * 5 4 3 7 7 C 1.53005 * 109.47155 * 119.71423 * 5 4 3 8 8 C 1.52999 * 109.47159 * 179.97438 * 7 5 4 9 9 C 1.52997 * 109.47317 * 300.00546 * 8 7 5 10 10 H 1.09002 * 109.47153 * 299.99641 * 9 8 7 11 11 N 1.46500 * 109.47007 * 179.97438 * 9 8 7 12 12 C 1.34779 * 119.99793 * 154.99772 * 11 9 8 13 13 O 1.21279 * 120.00185 * 0.02562 * 12 11 9 14 14 C 1.50702 * 119.99614 * 179.97438 * 12 11 9 15 15 O 1.42900 * 109.46704 * 180.02562 * 14 12 11 16 16 C 1.35904 * 116.99631 * 180.02562 * 15 14 12 17 17 C 1.38715 * 120.05411 * 180.02562 * 16 15 14 18 18 C 1.38160 * 119.94334 * 180.02562 * 17 16 15 19 19 C 1.50707 * 119.97294 * 179.97438 * 18 17 16 20 20 O 1.42901 * 109.47153 * 300.00674 * 19 18 17 21 21 Si 1.86294 * 109.47131 * 179.97438 * 19 18 17 22 22 C 1.38246 * 120.05964 * 0.02562 * 18 17 16 23 23 C 1.38286 * 120.10862 * 0.02562 * 22 18 17 24 24 C 1.38129 * 120.05519 * 359.67645 * 23 22 18 25 25 C 1.53000 * 109.47060 * 59.99960 * 9 8 7 26 26 C 1.52997 * 109.47078 * 239.71820 * 5 4 3 27 27 N 1.30719 * 108.94719 * 359.59249 * 4 3 2 28 28 N 1.34439 * 125.96100 * 179.76237 * 2 1 3 29 29 H 1.08994 * 109.47229 * 270.26524 * 1 2 3 30 30 H 1.09001 * 109.47257 * 30.26627 * 1 2 3 31 31 H 1.09003 * 109.47044 * 150.26609 * 1 2 3 32 32 H 1.09002 * 109.46935 * 60.00293 * 7 5 4 33 33 H 1.09000 * 109.47360 * 300.00319 * 7 5 4 34 34 H 1.08996 * 109.46929 * 179.97438 * 8 7 5 35 35 H 1.09002 * 109.46716 * 60.00455 * 8 7 5 36 36 H 0.97004 * 120.00223 * 334.99863 * 11 9 8 37 37 H 1.09002 * 109.47423 * 300.00169 * 14 12 11 38 38 H 1.09002 * 109.46795 * 60.00420 * 14 12 11 39 39 H 1.08002 * 120.02700 * 359.97438 * 17 16 15 40 40 H 1.09001 * 109.46564 * 60.00243 * 19 18 17 41 41 H 0.96704 * 113.99540 * 299.99103 * 20 19 18 42 42 H 1.48504 * 110.00168 * 58.68635 * 21 19 18 43 43 H 1.48507 * 110.00014 * 180.02562 * 21 19 18 44 44 H 1.07996 * 119.94427 * 179.97438 * 22 18 17 45 45 H 1.08003 * 119.97354 * 179.97438 * 23 22 18 46 46 H 1.07998 * 120.02795 * 180.32317 * 24 23 22 47 47 H 1.08992 * 109.47399 * 59.99823 * 25 9 8 48 48 H 1.09004 * 109.46724 * 180.02562 * 25 9 8 49 49 H 1.09002 * 109.46695 * 299.99519 * 26 5 4 50 50 H 1.08993 * 109.47194 * 59.99505 * 26 5 4 51 51 H 0.96992 * 126.81952 * 359.91924 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0590 0.0000 4 6 3.5553 0.6887 -0.0043 5 6 4.7373 1.6235 -0.0087 6 1 4.3847 2.6549 -0.0129 7 6 5.5852 1.3795 1.2413 8 6 6.7856 2.3281 1.2365 9 6 7.6323 2.0730 -0.0120 10 1 7.9845 1.0414 -0.0076 11 7 8.7813 2.9818 -0.0169 12 6 9.9027 2.6467 -0.6854 13 8 9.9603 1.5931 -1.2833 14 6 11.0844 3.5818 -0.6908 15 8 12.1421 3.0083 -1.4618 16 6 13.2892 3.7292 -1.5679 17 6 14.3564 3.2326 -2.3019 18 6 15.5218 3.9672 -2.4078 19 6 16.6818 3.4281 -3.2046 20 8 17.1071 2.1841 -2.6446 21 14 18.0900 4.6467 -3.1534 22 6 15.6250 5.1959 -1.7827 23 6 14.5629 5.6927 -1.0495 24 6 13.3935 4.9649 -0.9457 25 6 6.7844 2.3171 -1.2619 26 6 5.5842 1.3689 -1.2572 27 7 3.6195 -0.6169 0.0017 28 7 2.2964 -1.0882 0.0045 29 1 -0.3633 0.0048 1.0276 30 1 -0.3634 0.8876 -0.5180 31 1 -0.3633 -0.8924 -0.5097 32 1 5.9377 0.3481 1.2455 33 1 4.9818 1.5609 2.1308 34 1 7.3893 2.1546 2.1272 35 1 6.4334 3.3597 1.2321 36 1 8.7352 3.8246 0.4611 37 1 10.7912 4.5355 -1.1297 38 1 11.4256 3.7421 0.3320 39 1 14.2767 2.2722 -2.7894 40 1 16.3723 3.2743 -4.2383 41 1 17.3973 2.2458 -1.7242 42 1 18.5005 4.8898 -1.7471 43 1 19.2401 4.1270 -3.9361 44 1 16.5369 5.7684 -1.8663 45 1 14.6461 6.6527 -0.5617 46 1 12.5625 5.3557 -0.3773 47 1 6.4322 3.3485 -1.2664 48 1 7.3875 2.1348 -2.1514 49 1 5.9367 0.3375 -1.2529 50 1 4.9801 1.5427 -2.1476 51 1 2.0093 -2.0146 0.0094 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608548_4860298.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:42:57 Heat of formation + Delta-G solvation = -2.283077 kcal Electronic energy + Delta-G solvation = -32402.306058 eV Core-core repulsion = 27883.763423 eV Total energy + Delta-G solvation = -4518.542636 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -43.24042 -41.61212 -40.87813 -39.50212 -38.80136 -37.34638 -35.80893 -33.83314 -33.39198 -32.48157 -31.88493 -31.85117 -30.86579 -29.09323 -28.45332 -26.81573 -24.76021 -23.84419 -23.66401 -22.73446 -22.22398 -21.54516 -21.45492 -20.57579 -19.34383 -18.93024 -18.51914 -17.88668 -17.43236 -17.32332 -17.05643 -16.82144 -16.75407 -16.26578 -16.14792 -15.69368 -15.52322 -15.28399 -15.13167 -15.02497 -14.79492 -14.69122 -14.14968 -14.09323 -14.01201 -13.94435 -13.69078 -13.55019 -13.40414 -13.25765 -12.99149 -12.85962 -12.60388 -12.34913 -12.29015 -12.17867 -12.09718 -12.01952 -11.67206 -11.60783 -11.47269 -11.11195 -11.06003 -10.96547 -10.68645 -10.48178 -10.16727 -9.92178 -9.27913 -4.90744 0.21312 0.39963 0.54218 1.27959 1.44401 1.49920 1.62456 1.68607 1.77342 1.97150 2.58217 2.67554 2.92328 3.39592 3.46564 3.54863 3.64655 3.66783 3.69394 3.79304 3.86494 4.01331 4.05922 4.08869 4.14051 4.17332 4.19289 4.25808 4.35130 4.36311 4.39190 4.44367 4.54952 4.61176 4.63621 4.65455 4.65832 4.80644 4.99109 4.99597 5.00785 5.02190 5.07560 5.11364 5.21468 5.24825 5.25676 5.32029 5.37277 5.37941 5.45516 5.47664 5.70642 6.14490 6.28997 6.45822 6.49418 7.04221 7.14926 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.285 3.715 3 N -0.572 5.572 4 C 0.224 3.776 5 C 0.010 3.990 6 H 0.111 0.889 7 C -0.100 4.100 8 C -0.111 4.111 9 C 0.147 3.853 10 H 0.061 0.939 11 N -0.703 5.703 12 C 0.511 3.489 13 O -0.575 6.575 14 C 0.038 3.962 15 O -0.325 6.325 16 C 0.113 3.887 17 C -0.151 4.151 18 C -0.082 4.082 19 C -0.096 4.096 20 O -0.552 6.552 21 Si 0.787 3.213 22 C -0.157 4.157 23 C -0.070 4.070 24 C -0.201 4.201 25 C -0.119 4.119 26 C -0.099 4.099 27 N -0.344 5.344 28 N -0.481 5.481 29 H 0.108 0.892 30 H 0.100 0.900 31 H 0.108 0.892 32 H 0.056 0.944 33 H 0.075 0.925 34 H 0.086 0.914 35 H 0.100 0.900 36 H 0.423 0.577 37 H 0.128 0.872 38 H 0.126 0.874 39 H 0.110 0.890 40 H 0.119 0.881 41 H 0.386 0.614 42 H -0.276 1.276 43 H -0.305 1.305 44 H 0.150 0.850 45 H 0.164 0.836 46 H 0.162 0.838 47 H 0.091 0.909 48 H 0.049 0.951 49 H 0.052 0.948 50 H 0.062 0.938 51 H 0.453 0.547 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.815 8.725 5.013 11.622 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.008 3.992 3 N -0.303 5.303 4 C -0.058 4.058 5 C -0.011 4.011 6 H 0.129 0.871 7 C -0.139 4.139 8 C -0.149 4.149 9 C 0.043 3.957 10 H 0.079 0.921 11 N -0.357 5.357 12 C 0.297 3.703 13 O -0.453 6.453 14 C -0.039 4.039 15 O -0.238 6.238 16 C 0.068 3.932 17 C -0.170 4.170 18 C -0.082 4.082 19 C -0.203 4.203 20 O -0.360 6.360 21 Si 0.691 3.309 22 C -0.175 4.175 23 C -0.088 4.088 24 C -0.220 4.220 25 C -0.158 4.158 26 C -0.138 4.138 27 N -0.173 5.173 28 N -0.200 5.200 29 H 0.126 0.874 30 H 0.119 0.881 31 H 0.127 0.873 32 H 0.075 0.925 33 H 0.094 0.906 34 H 0.104 0.896 35 H 0.119 0.881 36 H 0.261 0.739 37 H 0.145 0.855 38 H 0.143 0.857 39 H 0.128 0.872 40 H 0.136 0.864 41 H 0.235 0.765 42 H -0.202 1.202 43 H -0.234 1.234 44 H 0.167 0.833 45 H 0.181 0.819 46 H 0.179 0.821 47 H 0.110 0.890 48 H 0.068 0.932 49 H 0.071 0.929 50 H 0.081 0.919 51 H 0.302 0.698 Dipole moment (debyes) X Y Z Total from point charges -4.615 7.662 4.164 9.867 hybrid contribution -0.475 -1.956 0.732 2.142 sum -5.091 5.707 4.896 9.080 Atomic orbital electron populations 1.20640 0.80460 1.06463 1.06026 1.25217 0.98186 0.82233 0.93599 1.70398 1.01741 1.30979 1.27163 1.24592 0.93786 0.90350 0.97099 1.19686 0.87985 0.96847 0.96558 0.87113 1.21440 0.96016 1.00055 0.96428 1.21724 0.95334 1.01511 0.96347 1.20965 0.85060 0.93740 0.95978 0.92107 1.45707 1.12757 1.24179 1.53025 1.20602 0.84513 0.86662 0.78474 1.90772 1.83147 1.26788 1.44603 1.22744 0.85237 0.96756 0.99196 1.86129 1.22221 1.46149 1.69318 1.19209 0.85735 0.91752 0.96494 1.20288 0.92391 1.01418 1.02905 1.20130 0.94570 0.95188 0.98362 1.25494 1.02010 0.93209 0.99625 1.86581 1.85681 1.30895 1.32835 0.93884 0.73851 0.83397 0.79810 1.21217 1.00868 0.95515 0.99852 1.21344 0.91218 1.00255 0.95946 1.21644 1.01632 0.94200 1.04495 1.21820 0.95506 1.00868 0.97596 1.21393 0.95940 0.99728 0.96756 1.77929 0.98345 1.12934 1.28093 1.48009 1.03603 1.11025 1.57374 0.87357 0.88084 0.87301 0.92528 0.90606 0.89559 0.88146 0.73850 0.85464 0.85684 0.87217 0.86366 0.76471 1.20191 1.23379 0.83311 0.81867 0.82071 0.89015 0.93212 0.92926 0.91927 0.69848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.60 10.51 71.23 0.75 1.35 16 2 C 0.29 0.52 8.24 138.22 1.14 1.66 16 3 N -0.57 -4.35 11.19 -179.72 -2.01 -6.36 16 4 C 0.22 1.70 6.65 138.63 0.92 2.62 16 5 C 0.01 0.02 2.66 -11.54 -0.03 -0.01 16 6 H 0.11 -0.03 8.14 -2.39 -0.02 -0.05 16 7 C -0.10 0.06 5.19 30.60 0.16 0.22 16 8 C -0.11 0.62 5.39 30.59 0.16 0.78 16 9 C 0.15 -0.07 2.45 44.99 0.11 0.04 16 10 H 0.06 0.40 7.58 -2.39 -0.02 0.38 16 11 N -0.70 2.69 5.08 -442.53 -2.25 0.45 16 12 C 0.51 1.99 7.87 87.66 0.69 2.68 16 13 O -0.57 -9.51 16.16 16.01 0.26 -9.25 16 14 C 0.04 -0.09 5.22 71.24 0.37 0.28 16 15 O -0.32 -2.58 9.67 -73.43 -0.71 -3.29 16 16 C 0.11 0.56 6.69 22.51 0.15 0.71 16 17 C -0.15 -1.11 9.55 22.37 0.21 -0.90 16 18 C -0.08 -0.22 5.39 -19.88 -0.11 -0.33 16 19 C -0.10 -0.22 2.82 71.24 0.20 -0.02 16 20 O -0.55 -3.45 12.77 -148.98 -1.90 -5.36 16 21 Si 0.79 -1.24 29.79 68.60 2.04 0.81 16 22 C -0.16 0.30 8.67 22.28 0.19 0.49 16 23 C -0.07 0.29 10.04 22.26 0.22 0.52 16 24 C -0.20 0.49 9.04 22.37 0.20 0.70 16 25 C -0.12 -0.09 5.49 30.58 0.17 0.08 16 26 C -0.10 -0.33 5.18 30.58 0.16 -0.17 16 27 N -0.34 -2.99 12.80 -51.33 -0.66 -3.65 16 28 N -0.48 -1.04 7.45 -50.70 -0.38 -1.42 16 29 H 0.11 -1.12 8.14 -2.39 -0.02 -1.14 16 30 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 31 H 0.11 -1.37 8.14 -2.39 -0.02 -1.39 16 32 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 33 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 35 H 0.10 -1.01 8.14 -2.39 -0.02 -1.03 16 36 H 0.42 -5.26 8.60 -92.71 -0.80 -6.06 16 37 H 0.13 -1.17 7.66 -2.39 -0.02 -1.19 16 38 H 0.13 -1.12 7.67 -2.39 -0.02 -1.13 16 39 H 0.11 1.23 8.06 -2.91 -0.02 1.21 16 40 H 0.12 0.21 7.96 -2.39 -0.02 0.19 16 41 H 0.39 0.03 8.70 -74.05 -0.64 -0.61 16 42 H -0.28 -0.29 7.11 99.48 0.71 0.41 16 43 H -0.31 -1.97 7.11 99.48 0.71 -1.26 16 44 H 0.15 -0.96 4.87 -2.91 -0.01 -0.98 16 45 H 0.16 -1.73 8.06 -2.91 -0.02 -1.76 16 46 H 0.16 -1.55 6.30 -2.91 -0.02 -1.57 16 47 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 48 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 49 H 0.05 0.40 8.14 -2.39 -0.02 0.38 16 50 H 0.06 0.28 8.14 -2.39 -0.02 0.26 16 51 H 0.45 -2.18 8.96 -213.11 -1.91 -4.09 16 Total: 0.00 -35.91 418.27 -2.25 -38.16 By element: Atomic # 1 Polarization: -18.47 SS G_CDS: -2.32 Total: -20.79 kcal Atomic # 6 Polarization: 5.03 SS G_CDS: 5.68 Total: 10.70 kcal Atomic # 7 Polarization: -5.69 SS G_CDS: -5.29 Total: -10.98 kcal Atomic # 8 Polarization: -15.54 SS G_CDS: -2.35 Total: -17.90 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: 2.04 Total: 0.81 kcal Total: -35.91 -2.25 -38.16 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608548_4860298.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.873 kcal (2) G-P(sol) polarization free energy of solvation -35.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.249 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.156 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.283 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds