Wall clock time and date at job start Sun Mar 7 2021 02:43:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 N 1.30825 * 125.96648 * 2 1 4 4 C 1.33241 * 109.83246 * 180.12620 * 3 2 1 5 5 C 1.50696 * 125.52724 * 179.85918 * 4 3 2 6 6 H 1.08996 * 109.47390 * 359.71552 * 5 4 3 7 7 C 1.52997 * 109.47242 * 119.71582 * 5 4 3 8 8 C 1.53006 * 109.47127 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.46626 * 299.99539 * 8 7 5 10 10 H 1.08993 * 109.47839 * 299.99931 * 9 8 7 11 11 N 1.46506 * 109.46691 * 179.97438 * 9 8 7 12 12 C 1.34783 * 119.99811 * 155.00013 * 11 9 8 13 13 O 1.21287 * 119.99943 * 0.02562 * 12 11 9 14 14 C 1.50696 * 120.00006 * 179.97438 * 12 11 9 15 15 O 1.42894 * 109.47002 * 180.02562 * 14 12 11 16 16 C 1.35918 * 117.00296 * 180.02562 * 15 14 12 17 17 C 1.38788 * 120.06558 * 179.97438 * 16 15 14 18 18 Br 1.89099 * 120.03269 * 0.02562 * 17 16 15 19 19 C 1.38236 * 119.92939 * 179.97438 * 17 16 15 20 20 C 1.38241 * 120.05040 * 0.02562 * 19 17 16 21 21 C 1.50698 * 119.94551 * 179.97438 * 20 19 17 22 22 O 1.42898 * 109.47208 * 64.99852 * 21 20 19 23 23 Si 1.86304 * 109.47232 * 184.99976 * 21 20 19 24 24 C 1.38292 * 120.11259 * 359.97438 * 20 19 17 25 25 C 1.38141 * 120.07263 * 359.76600 * 24 20 19 26 26 C 1.52997 * 109.46991 * 60.00378 * 9 8 7 27 27 C 1.52996 * 109.47131 * 299.99311 * 26 9 8 28 28 N 1.30717 * 108.94496 * 359.58773 * 4 3 2 29 29 N 1.34431 * 125.95524 * 179.67318 * 2 1 3 30 30 H 1.09006 * 109.47334 * 270.30324 * 1 2 3 31 31 H 1.09007 * 109.47099 * 30.30005 * 1 2 3 32 32 H 1.08997 * 109.47785 * 150.30554 * 1 2 3 33 33 H 1.09001 * 109.47502 * 60.00161 * 7 5 4 34 34 H 1.09001 * 109.47289 * 299.99957 * 7 5 4 35 35 H 1.08993 * 109.46955 * 60.00011 * 8 7 5 36 36 H 1.09000 * 109.47050 * 179.97438 * 8 7 5 37 37 H 0.97000 * 120.00279 * 335.00513 * 11 9 8 38 38 H 1.08997 * 109.47646 * 300.00758 * 14 12 11 39 39 H 1.09002 * 109.46942 * 60.00572 * 14 12 11 40 40 H 1.08002 * 119.97730 * 179.97438 * 19 17 16 41 41 H 1.08997 * 109.46922 * 304.99677 * 21 20 19 42 42 H 0.96704 * 113.99965 * 60.00031 * 22 21 20 43 43 H 1.48495 * 109.99840 * 180.02562 * 23 21 20 44 44 H 1.48503 * 109.99545 * 301.31900 * 23 21 20 45 45 H 1.07997 * 119.95674 * 180.02562 * 24 20 19 46 46 H 1.08001 * 120.02607 * 180.24960 * 25 24 20 47 47 H 1.09001 * 109.47289 * 179.97438 * 26 9 8 48 48 H 1.09000 * 109.47611 * 59.99933 * 26 9 8 49 49 H 1.08996 * 109.47452 * 300.00000 * 27 26 9 50 50 H 1.09000 * 109.47054 * 180.02562 * 27 26 9 51 51 H 0.97004 * 126.82850 * 359.97438 * 29 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0588 0.0000 4 6 3.5552 0.6886 -0.0028 5 6 4.7372 1.6234 -0.0067 6 1 4.3848 2.6548 -0.0120 7 6 5.5839 1.3803 1.2443 8 6 6.7836 2.3298 1.2406 9 6 7.6320 2.0747 -0.0069 10 1 7.9849 1.0435 -0.0018 11 7 8.7804 2.9844 -0.0107 12 6 9.9028 2.6498 -0.6778 13 8 9.9618 1.5960 -1.2753 14 6 11.0839 3.5857 -0.6823 15 8 12.1428 3.0126 -1.4519 16 6 13.2897 3.7343 -1.5570 17 6 14.3591 3.2376 -2.2891 18 35 14.2220 1.5557 -3.1424 19 6 15.5241 3.9742 -2.3946 20 6 15.6244 5.2040 -1.7713 21 6 16.8958 6.0047 -1.8875 22 8 17.0925 6.3914 -3.2490 23 14 16.7703 7.5274 -0.8214 24 6 14.5600 5.7008 -1.0414 25 6 13.3916 4.9712 -0.9372 26 6 6.7853 2.3178 -1.2578 27 6 5.5856 1.3683 -1.2541 28 7 3.6194 -0.6170 0.0043 29 7 2.2963 -1.0882 0.0062 30 1 -0.3634 0.0054 1.0277 31 1 -0.3634 0.8873 -0.5185 32 1 -0.3634 -0.8926 -0.5090 33 1 5.9365 0.3488 1.2497 34 1 4.9797 1.5623 2.1330 35 1 6.4308 3.3610 1.2355 36 1 7.3866 2.1569 2.1320 37 1 8.7331 3.8273 0.4669 38 1 10.7905 4.5390 -1.1218 39 1 11.4238 3.7466 0.3408 40 1 16.3569 3.5882 -2.9638 41 1 17.7387 5.3981 -1.5566 42 1 16.3790 6.9348 -3.6106 43 1 18.0177 8.3260 -0.9276 44 1 15.6056 8.3471 -1.2419 45 1 14.6410 6.6620 -0.5559 46 1 12.5594 5.3617 -0.3703 47 1 7.3898 2.1366 -2.1466 48 1 6.4325 3.3491 -1.2630 49 1 5.9384 0.3371 -1.2490 50 1 4.9827 1.5412 -2.1456 51 1 2.0092 -2.0147 0.0118 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608548_6201210.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:43:22 Heat of formation + Delta-G solvation = 5.027533 kcal Electronic energy + Delta-G solvation = -34619.835592 eV Core-core repulsion = 29761.791965 eV Total energy + Delta-G solvation = -4858.043627 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 451.094 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -43.23423 -41.69409 -40.92115 -39.55100 -38.85615 -37.32478 -35.77147 -33.83556 -33.57793 -33.38559 -31.97754 -31.86123 -31.21269 -30.38160 -29.24671 -28.52630 -26.35478 -24.84228 -23.87213 -23.80219 -22.49628 -22.27806 -21.58489 -21.46887 -20.56900 -19.56927 -18.92376 -18.57776 -18.16553 -17.47417 -17.29005 -17.09567 -16.74867 -16.44845 -16.25190 -15.99334 -15.72361 -15.68661 -15.31446 -15.14080 -15.12657 -14.79596 -14.68690 -14.47836 -14.10120 -14.01369 -13.83111 -13.77365 -13.67550 -13.58815 -13.44883 -13.24534 -12.85350 -12.41677 -12.33364 -12.25470 -12.19721 -12.16717 -12.14367 -11.88291 -11.68287 -11.65033 -11.45246 -11.23173 -11.10473 -11.04882 -10.92016 -10.59194 -10.47309 -10.12235 -9.96019 -9.32023 -4.88177 -0.04379 0.13066 0.54911 0.65084 1.34399 1.44150 1.50549 1.62705 1.69203 1.78112 2.02177 2.40099 2.52380 2.93144 3.41826 3.46989 3.53746 3.61931 3.66708 3.70784 3.77309 3.79649 3.86354 4.05281 4.07945 4.11426 4.13160 4.19214 4.21388 4.33718 4.37584 4.39285 4.46117 4.59052 4.62139 4.65526 4.66065 4.66722 4.82419 4.86590 5.01340 5.01611 5.02307 5.03717 5.09136 5.13284 5.22530 5.24535 5.27110 5.34413 5.39158 5.48159 5.52034 6.08728 6.15002 6.51415 6.52009 7.04911 7.20616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.285 3.715 3 N -0.573 5.573 4 C 0.224 3.776 5 C 0.010 3.990 6 H 0.110 0.890 7 C -0.100 4.100 8 C -0.111 4.111 9 C 0.148 3.852 10 H 0.061 0.939 11 N -0.703 5.703 12 C 0.511 3.489 13 O -0.570 6.570 14 C 0.032 3.968 15 O -0.306 6.306 16 C 0.149 3.851 17 C -0.145 4.145 18 Br -0.057 7.057 19 C -0.035 4.035 20 C -0.149 4.149 21 C -0.085 4.085 22 O -0.551 6.551 23 Si 0.778 3.222 24 C -0.056 4.056 25 C -0.189 4.189 26 C -0.119 4.119 27 C -0.099 4.099 28 N -0.343 5.343 29 N -0.481 5.481 30 H 0.108 0.892 31 H 0.100 0.900 32 H 0.108 0.892 33 H 0.056 0.944 34 H 0.075 0.925 35 H 0.100 0.900 36 H 0.087 0.913 37 H 0.423 0.577 38 H 0.131 0.869 39 H 0.135 0.865 40 H 0.136 0.864 41 H 0.122 0.878 42 H 0.387 0.613 43 H -0.308 1.308 44 H -0.269 1.269 45 H 0.165 0.835 46 H 0.181 0.819 47 H 0.049 0.951 48 H 0.090 0.910 49 H 0.052 0.948 50 H 0.060 0.940 51 H 0.453 0.547 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.761 6.720 8.121 12.522 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.008 3.992 3 N -0.303 5.303 4 C -0.058 4.058 5 C -0.011 4.011 6 H 0.128 0.872 7 C -0.140 4.140 8 C -0.149 4.149 9 C 0.044 3.956 10 H 0.079 0.921 11 N -0.358 5.358 12 C 0.297 3.703 13 O -0.448 6.448 14 C -0.045 4.045 15 O -0.219 6.219 16 C 0.101 3.899 17 C -0.225 4.225 18 Br 0.029 6.971 19 C -0.055 4.055 20 C -0.151 4.151 21 C -0.193 4.193 22 O -0.359 6.359 23 Si 0.682 3.318 24 C -0.073 4.073 25 C -0.207 4.207 26 C -0.158 4.158 27 C -0.138 4.138 28 N -0.173 5.173 29 N -0.200 5.200 30 H 0.126 0.874 31 H 0.119 0.881 32 H 0.127 0.873 33 H 0.075 0.925 34 H 0.093 0.907 35 H 0.118 0.882 36 H 0.105 0.895 37 H 0.262 0.738 38 H 0.149 0.851 39 H 0.152 0.848 40 H 0.154 0.846 41 H 0.139 0.861 42 H 0.236 0.764 43 H -0.237 1.237 44 H -0.195 1.195 45 H 0.182 0.818 46 H 0.198 0.802 47 H 0.068 0.932 48 H 0.109 0.891 49 H 0.071 0.929 50 H 0.079 0.921 51 H 0.301 0.699 Dipole moment (debyes) X Y Z Total from point charges -5.730 5.600 7.400 10.907 hybrid contribution -0.565 -0.483 -1.283 1.483 sum -6.296 5.117 6.117 10.160 Atomic orbital electron populations 1.20639 0.80487 1.06446 1.06024 1.25206 0.98179 0.82244 0.93616 1.70394 1.01765 1.30985 1.27175 1.24605 0.93790 0.90362 0.97077 1.19686 0.87977 0.96794 0.96615 0.87171 1.21441 0.96082 1.00102 0.96333 1.21723 0.95293 1.01425 0.96450 1.20934 0.85095 0.93785 0.95802 0.92068 1.45694 1.12712 1.24142 1.53209 1.20557 0.84456 0.86737 0.78577 1.90799 1.83026 1.26641 1.44316 1.22878 0.85108 0.96912 0.99599 1.86252 1.21555 1.45270 1.68790 1.18823 0.85312 0.91301 0.94440 1.21280 0.97363 0.96052 1.07820 1.96761 1.98668 1.23266 1.78437 1.20884 0.94892 0.93250 0.96486 1.20284 0.97687 0.95673 1.01435 1.25329 0.97387 1.07517 0.89066 1.86595 1.50239 1.72965 1.26125 0.94087 0.76807 0.73945 0.86922 1.21297 0.91150 0.99902 0.94978 1.21571 1.01587 0.93138 1.04451 1.21824 0.95496 1.00759 0.97702 1.21400 0.95982 0.99757 0.96695 1.77930 0.98320 1.12936 1.28092 1.48012 1.03617 1.11020 1.57371 0.87351 0.88104 0.87316 0.92522 0.90667 0.88186 0.89452 0.73849 0.85123 0.84796 0.84644 0.86065 0.76406 1.23688 1.19520 0.81823 0.80209 0.93229 0.89099 0.92933 0.92081 0.69851 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.61 10.51 71.23 0.75 1.36 16 2 C 0.29 0.47 8.24 138.23 1.14 1.61 16 3 N -0.57 -4.23 11.19 -179.73 -2.01 -6.24 16 4 C 0.22 1.63 6.65 138.63 0.92 2.56 16 5 C 0.01 0.02 2.66 -11.54 -0.03 -0.01 16 6 H 0.11 -0.07 8.14 -2.39 -0.02 -0.09 16 7 C -0.10 0.12 5.19 30.60 0.16 0.28 16 8 C -0.11 0.72 5.39 30.60 0.16 0.88 16 9 C 0.15 -0.24 2.45 44.99 0.11 -0.13 16 10 H 0.06 0.34 7.58 -2.39 -0.02 0.32 16 11 N -0.70 3.89 5.08 -442.52 -2.25 1.64 16 12 C 0.51 0.89 7.87 87.65 0.69 1.58 16 13 O -0.57 -8.31 16.16 15.99 0.26 -8.05 16 14 C 0.03 -0.17 5.22 71.23 0.37 0.20 16 15 O -0.31 -1.49 9.00 -73.59 -0.66 -2.16 16 16 C 0.15 0.35 6.68 22.52 0.15 0.50 16 17 C -0.15 -0.87 6.24 22.40 0.14 -0.73 16 18 Br -0.06 -0.58 33.16 -20.37 -0.68 -1.26 16 19 C -0.04 -0.11 9.42 22.27 0.21 0.10 16 20 C -0.15 0.26 5.35 -19.85 -0.11 0.16 16 21 C -0.09 0.21 2.80 71.24 0.20 0.41 16 22 O -0.55 -0.87 12.83 -148.98 -1.91 -2.78 16 23 Si 0.78 -4.30 29.88 68.60 2.05 -2.25 16 24 C -0.06 0.33 8.66 22.26 0.19 0.53 16 25 C -0.19 1.07 9.04 22.36 0.20 1.27 16 26 C -0.12 0.00 5.49 30.59 0.17 0.17 16 27 C -0.10 -0.29 5.19 30.59 0.16 -0.13 16 28 N -0.34 -2.89 12.80 -51.34 -0.66 -3.55 16 29 N -0.48 -0.94 7.45 -50.71 -0.38 -1.32 16 30 H 0.11 -1.13 8.14 -2.38 -0.02 -1.15 16 31 H 0.10 -0.77 8.14 -2.38 -0.02 -0.79 16 32 H 0.11 -1.38 8.14 -2.39 -0.02 -1.40 16 33 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 34 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 35 H 0.10 -1.09 8.14 -2.39 -0.02 -1.11 16 36 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 37 H 0.42 -6.02 8.60 -92.71 -0.80 -6.82 16 38 H 0.13 -1.61 7.65 -2.39 -0.02 -1.63 16 39 H 0.13 -1.71 7.67 -2.39 -0.02 -1.73 16 40 H 0.14 0.47 8.06 -2.91 -0.02 0.45 16 41 H 0.12 -0.39 7.96 -2.39 -0.02 -0.41 16 42 H 0.39 -1.69 8.70 -74.05 -0.64 -2.34 16 43 H -0.31 -1.07 7.11 99.48 0.71 -0.37 16 44 H -0.27 1.00 7.01 99.48 0.70 1.70 16 45 H 0.16 -1.91 4.83 -2.91 -0.01 -1.92 16 46 H 0.18 -2.55 6.30 -2.91 -0.02 -2.57 16 47 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 48 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 49 H 0.05 0.38 8.14 -2.39 -0.02 0.36 16 50 H 0.06 0.26 8.14 -2.39 -0.02 0.24 16 51 H 0.45 -2.27 8.96 -213.09 -1.91 -4.18 16 Total: 0.00 -36.70 438.72 -2.96 -39.66 By element: Atomic # 1 Polarization: -21.98 SS G_CDS: -2.31 Total: -24.30 kcal Atomic # 6 Polarization: 5.02 SS G_CDS: 5.59 Total: 10.61 kcal Atomic # 7 Polarization: -4.18 SS G_CDS: -5.29 Total: -9.47 kcal Atomic # 8 Polarization: -10.68 SS G_CDS: -2.32 Total: -12.99 kcal Atomic # 14 Polarization: -4.30 SS G_CDS: 2.05 Total: -2.25 kcal Atomic # 35 Polarization: -0.58 SS G_CDS: -0.68 Total: -1.26 kcal Total: -36.70 -2.96 -39.66 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608548_6201210.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.688 kcal (2) G-P(sol) polarization free energy of solvation -36.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.983 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.956 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.661 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds