Wall clock time and date at job start Sun Mar 7 2021 05:15:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35986 * 116.99674 * 2 1 4 4 C 1.38677 * 119.99704 * 179.97438 * 3 2 1 5 5 C 1.38154 * 120.00142 * 180.02562 * 4 3 2 6 6 C 1.50694 * 120.00320 * 179.97438 * 5 4 3 7 7 O 1.42899 * 109.47323 * 255.02394 * 6 5 4 8 8 Si 1.86303 * 109.47185 * 15.02104 * 6 5 4 9 9 C 1.38683 * 119.99676 * 359.97438 * 5 4 3 10 10 O 1.35984 * 119.99845 * 179.97438 * 9 5 4 11 11 C 1.42898 * 117.00076 * 179.97438 * 10 9 5 12 12 C 1.50696 * 109.47213 * 180.02562 * 11 10 9 13 13 O 1.21276 * 120.00096 * 0.02562 * 12 11 10 14 14 N 1.34775 * 119.99801 * 180.02562 * 12 11 10 15 15 C 1.47218 * 136.18384 * 359.97283 * 14 12 11 16 16 C 1.53636 * 88.20699 * 153.59844 * 15 14 12 17 17 C 1.46288 * 136.18059 * 179.97438 * 14 12 11 18 18 C 1.53076 * 120.98466 * 332.52919 * 17 14 12 19 19 C 1.53920 * 86.84284 * 100.33633 * 18 17 14 20 20 C 1.50700 * 113.58426 * 139.46090 * 19 18 17 21 21 N 1.30502 * 125.64838 * 95.02803 * 20 19 18 22 22 C 1.34133 * 109.25445 * 179.97438 * 21 20 19 23 23 C 1.34671 * 108.02144 * 0.02562 * 22 21 20 24 24 N 1.35045 * 125.65122 * 274.71604 * 20 19 18 25 25 C 1.53067 * 120.98635 * 80.56763 * 17 14 12 26 26 C 1.38713 * 119.99860 * 0.27980 * 9 5 4 27 27 C 1.38111 * 120.00103 * 359.44412 * 26 9 5 28 28 H 1.09002 * 109.47254 * 300.00231 * 1 2 3 29 29 H 1.09002 * 109.47041 * 60.00492 * 1 2 3 30 30 H 1.09001 * 109.47165 * 180.02562 * 1 2 3 31 31 H 1.08004 * 120.00096 * 0.04212 * 4 3 2 32 32 H 1.09000 * 109.47245 * 135.02372 * 6 5 4 33 33 H 0.96703 * 113.99786 * 299.99775 * 7 6 5 34 34 H 1.48500 * 109.99809 * 298.68315 * 8 6 5 35 35 H 1.48494 * 109.99861 * 59.99997 * 8 6 5 36 36 H 1.09008 * 109.46840 * 60.00036 * 11 10 9 37 37 H 1.09001 * 109.47227 * 300.00539 * 11 10 9 38 38 H 1.09001 * 113.43743 * 268.43772 * 15 14 12 39 39 H 1.09001 * 113.43415 * 38.76266 * 15 14 12 40 40 H 1.08997 * 114.27277 * 271.83181 * 16 15 14 41 41 H 1.08997 * 114.27693 * 138.94494 * 16 15 14 42 42 H 1.08997 * 113.65491 * 214.82570 * 18 17 14 43 43 H 1.08997 * 113.65110 * 345.85281 * 18 17 14 44 44 H 1.09002 * 113.58784 * 270.27945 * 19 18 17 45 45 H 1.07997 * 125.98664 * 179.97438 * 22 21 20 46 46 H 1.07995 * 126.59289 * 180.02562 * 23 22 21 47 47 H 0.97001 * 126.39249 * 0.02562 * 24 20 19 48 48 H 1.09003 * 113.65333 * 14.14820 * 25 17 14 49 49 H 1.09002 * 113.65468 * 145.08792 * 25 17 14 50 50 H 1.08003 * 119.99923 * 179.70452 * 26 9 5 51 51 H 1.08005 * 119.99898 * 180.26426 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0584 2.5152 0.0011 6 6 5.5633 2.5941 0.0022 7 8 6.0197 2.9667 1.3041 8 14 6.2726 0.9326 -0.4525 9 6 3.3030 3.6783 0.0005 10 8 3.9204 4.8899 0.0016 11 6 3.0804 6.0460 0.0004 12 6 3.9346 7.2875 0.0012 13 8 5.1436 7.1918 0.0022 14 7 3.3549 8.5042 0.0008 15 6 1.9779 9.0248 -0.0008 16 6 2.5084 10.2942 0.6830 17 6 3.8154 9.8927 0.0017 18 6 5.1678 10.2741 0.6088 19 6 5.7115 10.2979 -0.8309 20 6 6.6587 11.4389 -1.0990 21 7 7.9603 11.3804 -1.0249 22 6 8.4751 12.5811 -1.3291 23 6 7.4536 13.4154 -1.6016 24 7 6.3014 12.6898 -1.4615 25 6 4.2691 10.5734 -1.2920 26 6 1.9178 3.6056 0.0053 27 6 1.2908 2.3750 -0.0010 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 4.0194 0.3785 0.0003 32 1 5.8886 3.3392 -0.7238 33 1 5.6889 3.8235 1.6066 34 1 5.8624 -0.0857 0.5476 35 1 5.8054 0.5337 -1.8044 36 1 2.4498 6.0378 0.8895 37 1 2.4525 6.0379 -0.8905 38 1 1.5832 9.2039 -1.0009 39 1 1.2958 8.4485 0.6244 40 1 2.5352 10.2390 1.7713 41 1 2.0734 11.2205 0.3079 42 1 5.1700 11.2505 1.0933 43 1 5.6053 9.4914 1.2285 44 1 6.1004 9.3364 -1.1662 45 1 9.5246 12.8345 -1.3508 46 1 7.5293 14.4556 -1.8820 47 1 5.3971 13.0142 -1.5951 48 1 3.9872 10.0302 -2.1941 49 1 4.0186 11.6332 -1.3398 50 1 1.3296 4.5114 0.0097 51 1 0.2122 2.3185 -0.0016 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15706034_4974302.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:15:16 Heat of formation + Delta-G solvation = 33.293536 kcal Electronic energy + Delta-G solvation = -35710.092669 eV Core-core repulsion = 30967.147949 eV Total energy + Delta-G solvation = -4742.944721 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -43.17216 -42.27285 -41.74121 -40.32948 -39.22948 -37.92353 -37.08719 -36.82571 -33.36966 -32.83920 -31.95419 -30.83574 -30.33940 -29.05382 -28.09376 -27.18140 -26.48527 -26.13115 -24.14176 -23.57103 -22.65893 -22.38888 -22.00530 -21.15618 -19.65484 -19.14043 -18.99140 -18.70964 -18.19879 -17.87305 -17.63614 -17.39876 -17.08612 -16.83793 -16.64114 -16.19749 -16.02890 -15.78294 -15.59308 -15.39849 -15.11177 -15.04279 -14.86442 -14.62978 -14.45706 -14.20682 -14.06700 -13.91748 -13.78008 -13.67238 -13.61699 -13.39972 -13.23465 -13.07641 -12.81625 -12.68631 -12.32653 -12.28728 -11.97040 -11.93406 -11.56572 -11.35353 -11.09488 -10.89921 -10.88328 -10.86377 -10.82473 -10.12685 -9.96445 -9.27537 -8.86106 -4.66206 0.02771 0.30964 1.04673 1.12631 1.38384 1.53679 1.81354 2.10825 2.12212 2.18443 2.26479 2.27279 2.51996 2.89458 3.11655 3.16363 3.27335 3.36623 3.50158 3.57336 3.60081 3.70710 3.79098 3.85974 3.91640 3.93605 3.97193 4.03738 4.08783 4.12284 4.12554 4.13733 4.18192 4.28624 4.35551 4.44072 4.45793 4.47238 4.50446 4.53432 4.56468 4.61024 4.70376 4.76376 4.87428 5.00377 5.01093 5.07909 5.13809 5.14073 5.27037 5.36183 5.86790 6.06347 6.33461 6.41880 6.43812 6.78010 6.94320 7.24322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.104 3.896 4 C -0.115 4.115 5 C -0.095 4.095 6 C -0.076 4.076 7 O -0.533 6.533 8 Si 0.748 3.252 9 C 0.103 3.897 10 O -0.288 6.288 11 C 0.049 3.951 12 C 0.544 3.456 13 O -0.498 6.498 14 N -0.627 5.627 15 C 0.097 3.903 16 C -0.137 4.137 17 C 0.143 3.857 18 C -0.123 4.123 19 C -0.018 4.018 20 C 0.220 3.780 21 N -0.484 5.484 22 C -0.026 4.026 23 C -0.058 4.058 24 N -0.567 5.567 25 C -0.133 4.133 26 C -0.164 4.164 27 C -0.164 4.164 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.103 0.897 31 H 0.139 0.861 32 H 0.080 0.920 33 H 0.368 0.632 34 H -0.251 1.251 35 H -0.249 1.249 36 H 0.093 0.907 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.084 0.916 40 H 0.103 0.897 41 H 0.096 0.904 42 H 0.096 0.904 43 H 0.090 0.910 44 H 0.125 0.875 45 H 0.171 0.829 46 H 0.178 0.822 47 H 0.416 0.584 48 H 0.085 0.915 49 H 0.094 0.906 50 H 0.134 0.866 51 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.471 5.999 -1.235 11.279 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.059 3.941 4 C -0.133 4.133 5 C -0.096 4.096 6 C -0.185 4.185 7 O -0.338 6.338 8 Si 0.646 3.354 9 C 0.057 3.943 10 O -0.201 6.201 11 C -0.029 4.029 12 C 0.332 3.668 13 O -0.371 6.371 14 N -0.365 5.365 15 C -0.025 4.025 16 C -0.175 4.175 17 C 0.058 3.942 18 C -0.162 4.162 19 C -0.038 4.038 20 C -0.044 4.044 21 N -0.203 5.203 22 C -0.174 4.174 23 C -0.191 4.191 24 N -0.171 5.171 25 C -0.172 4.172 26 C -0.183 4.183 27 C -0.183 4.183 28 H 0.075 0.925 29 H 0.075 0.925 30 H 0.122 0.878 31 H 0.157 0.843 32 H 0.098 0.902 33 H 0.216 0.784 34 H -0.176 1.176 35 H -0.173 1.173 36 H 0.111 0.889 37 H 0.110 0.890 38 H 0.109 0.891 39 H 0.102 0.898 40 H 0.121 0.879 41 H 0.115 0.885 42 H 0.115 0.885 43 H 0.108 0.892 44 H 0.143 0.857 45 H 0.188 0.812 46 H 0.195 0.805 47 H 0.254 0.746 48 H 0.103 0.897 49 H 0.113 0.887 50 H 0.152 0.848 51 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -7.749 3.438 -1.283 8.574 hybrid contribution -2.916 2.357 -0.269 3.759 sum -10.665 5.795 -1.552 12.237 Atomic orbital electron populations 1.23111 0.77961 1.04439 1.01368 1.86117 1.21670 1.26269 1.88891 1.18798 0.91827 0.84637 0.98860 1.20135 0.91908 0.97132 1.04132 1.19504 0.96770 0.89841 1.03530 1.25217 0.90506 1.13689 0.89057 1.86697 1.73638 1.41933 1.31537 0.93065 0.91292 0.72024 0.79020 1.18613 0.90739 0.84539 1.00363 1.86108 1.33820 1.10966 1.89210 1.22330 0.92952 0.83796 1.03870 1.19557 0.88282 0.82212 0.76735 1.90818 1.13731 1.85381 1.47145 1.49324 1.09818 1.03311 1.74025 1.23069 0.84494 0.93547 1.01418 1.23256 0.94534 0.98202 1.01463 1.22251 0.95218 0.80096 0.96656 1.23140 0.93658 1.03118 0.96273 1.20955 0.90153 0.95261 0.97446 1.22954 0.91962 0.86049 1.03426 1.70285 1.05859 1.24180 1.19928 1.22444 0.99708 0.89475 1.05792 1.22798 0.85593 0.99453 1.11293 1.43261 1.09559 1.10669 1.53631 1.23262 0.95115 1.01044 0.97778 1.21026 0.92848 0.98648 1.05740 1.21074 1.00326 0.91434 1.05486 0.92501 0.92525 0.87837 0.84347 0.90197 0.78398 1.17581 1.17342 0.88927 0.89010 0.89114 0.89793 0.87865 0.88541 0.88514 0.89160 0.85717 0.81172 0.80475 0.74625 0.89679 0.88729 0.84829 0.84597 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.94 10.50 -19.70 -0.21 -1.14 16 3 C 0.10 0.33 6.68 -39.24 -0.26 0.07 16 4 C -0.11 -0.48 8.59 -39.45 -0.34 -0.82 16 5 C -0.10 -0.37 5.27 -104.49 -0.55 -0.92 16 6 C -0.08 -0.27 2.33 36.00 0.08 -0.18 16 7 O -0.53 -2.34 12.65 -35.23 -0.45 -2.79 16 8 Si 0.75 1.56 30.40 -169.99 -5.17 -3.61 16 9 C 0.10 0.26 6.62 -39.24 -0.26 0.01 16 10 O -0.29 -0.74 8.56 -39.60 -0.34 -1.07 16 11 C 0.05 -0.04 5.06 36.00 0.18 0.14 16 12 C 0.54 0.75 8.14 -10.99 -0.09 0.66 16 13 O -0.50 -2.87 16.28 -14.35 -0.23 -3.10 16 14 N -0.63 0.96 3.69 -173.50 -0.64 0.31 16 15 C 0.10 -0.51 8.42 -9.79 -0.08 -0.59 16 16 C -0.14 0.71 8.23 -26.52 -0.22 0.49 16 17 C 0.14 -0.34 1.44 -138.46 -0.20 -0.53 16 18 C -0.12 0.01 7.17 -26.21 -0.19 -0.18 16 19 C -0.02 -0.02 4.29 -90.82 -0.39 -0.41 16 20 C 0.22 0.56 7.36 -155.41 -1.14 -0.58 16 21 N -0.48 -2.74 11.25 -10.81 -0.12 -2.86 16 22 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 23 C -0.06 -0.02 12.04 -16.56 -0.20 -0.22 16 24 N -0.57 0.24 5.94 -10.23 -0.06 0.17 16 25 C -0.13 0.36 7.43 -26.22 -0.19 0.16 16 26 C -0.16 -0.09 9.03 -39.45 -0.36 -0.45 16 27 C -0.16 -0.16 9.03 -39.45 -0.36 -0.51 16 28 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 29 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 30 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 31 H 0.14 0.58 4.93 -52.48 -0.26 0.32 16 32 H 0.08 0.27 7.82 -51.93 -0.41 -0.14 16 33 H 0.37 1.13 8.60 45.56 0.39 1.52 16 34 H -0.25 -1.06 6.81 56.52 0.38 -0.68 16 35 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 36 H 0.09 -0.28 7.65 -51.92 -0.40 -0.68 16 37 H 0.09 -0.27 7.67 -51.93 -0.40 -0.66 16 38 H 0.09 -0.58 8.14 -51.93 -0.42 -1.00 16 39 H 0.08 -0.55 8.14 -51.93 -0.42 -0.97 16 40 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 41 H 0.10 -0.66 8.14 -51.93 -0.42 -1.08 16 42 H 0.10 -0.11 8.09 -51.93 -0.42 -0.53 16 43 H 0.09 0.23 7.86 -51.93 -0.41 -0.18 16 44 H 0.12 0.49 7.73 -51.93 -0.40 0.09 16 45 H 0.17 0.19 8.06 -52.49 -0.42 -0.23 16 46 H 0.18 -0.53 8.06 -52.49 -0.42 -0.95 16 47 H 0.42 -1.61 7.53 -40.82 -0.31 -1.91 16 48 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 49 H 0.09 -0.48 6.63 -51.93 -0.34 -0.83 16 50 H 0.13 -0.34 6.29 -52.48 -0.33 -0.67 16 51 H 0.14 -0.22 6.29 -52.48 -0.33 -0.55 16 LS Contribution 419.41 15.07 6.32 6.32 Total: 0.00 -12.15 419.41 -11.68 -23.83 By element: Atomic # 1 Polarization: -5.87 SS G_CDS: -7.00 Total: -12.87 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -3.78 Total: -3.20 kcal Atomic # 7 Polarization: -1.55 SS G_CDS: -0.82 Total: -2.37 kcal Atomic # 8 Polarization: -6.88 SS G_CDS: -1.23 Total: -8.11 kcal Atomic # 14 Polarization: 1.56 SS G_CDS: -5.17 Total: -3.61 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -12.15 -11.68 -23.83 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15706034_4974302.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.128 kcal (2) G-P(sol) polarization free energy of solvation -12.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.834 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.294 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds