Wall clock time and date at job start Sun Mar 7 2021 05:16:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47524 * 2 1 4 4 C 1.50705 * 109.47170 * 119.99585 * 2 1 3 5 5 C 1.34235 * 126.50377 * 255.02834 * 4 2 1 6 6 N 1.36835 * 109.93739 * 179.97438 * 5 4 2 7 7 C 1.46501 * 125.05910 * 180.02562 * 6 5 4 8 8 C 1.50696 * 109.47112 * 264.97428 * 7 6 5 9 9 O 1.21283 * 120.00313 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00286 * 180.02562 * 8 7 6 11 11 C 1.47221 * 136.17822 * 359.97438 * 10 8 7 12 12 C 1.53632 * 88.20222 * 206.41893 * 11 10 8 13 13 C 1.46290 * 136.18498 * 179.63176 * 10 8 7 14 14 C 1.53068 * 120.98433 * 27.44678 * 13 10 8 15 15 C 1.53921 * 86.84554 * 259.66605 * 14 13 10 16 16 C 1.50695 * 113.58673 * 220.54101 * 15 14 13 17 17 N 1.30500 * 125.65093 * 192.69729 * 16 15 14 18 18 C 1.34126 * 109.25582 * 179.97438 * 17 16 15 19 19 C 1.34672 * 108.02397 * 0.02562 * 18 17 16 20 20 N 1.35049 * 125.65157 * 12.38750 * 16 15 14 21 21 C 1.53076 * 120.98193 * 279.41224 * 13 10 8 22 22 C 1.37693 * 109.87519 * 359.97438 * 6 5 4 23 23 C 1.39084 * 133.51293 * 180.02562 * 22 6 5 24 24 C 1.37789 * 119.77891 * 180.02562 * 23 22 6 25 25 C 1.38793 * 120.66498 * 359.92148 * 24 23 22 26 26 C 1.36657 * 120.52724 * 0.06304 * 25 24 23 27 27 C 1.39595 * 119.76566 * 359.97210 * 26 25 24 28 28 H 0.96701 * 113.99574 * 300.00192 * 1 2 3 29 29 H 1.09002 * 109.47482 * 239.99516 * 2 1 3 30 30 H 1.48507 * 109.99779 * 300.00238 * 3 2 1 31 31 H 1.48497 * 109.99978 * 61.31247 * 3 2 1 32 32 H 1.07997 * 125.02549 * 0.24010 * 5 4 2 33 33 H 1.08998 * 109.47264 * 24.97729 * 7 6 5 34 34 H 1.09000 * 109.47258 * 144.97749 * 7 6 5 35 35 H 1.09000 * 113.43371 * 321.25495 * 11 10 8 36 36 H 1.09002 * 113.43194 * 91.52546 * 11 10 8 37 37 H 1.08994 * 114.27574 * 88.17186 * 12 11 10 38 38 H 1.09005 * 114.27208 * 221.05090 * 12 11 10 39 39 H 1.09000 * 113.65311 * 14.15406 * 14 13 10 40 40 H 1.08997 * 113.65582 * 145.17665 * 14 13 10 41 41 H 1.09002 * 113.58430 * 89.72163 * 15 14 13 42 42 H 1.08004 * 125.98821 * 179.97438 * 18 17 16 43 43 H 1.07991 * 126.59037 * 180.02562 * 19 18 17 44 44 H 0.97001 * 126.39472 * 0.02562 * 20 16 15 45 45 H 1.08999 * 113.65015 * 214.82059 * 21 13 10 46 46 H 1.08998 * 113.65360 * 345.75234 * 21 13 10 47 47 H 1.08008 * 120.10822 * 359.97438 * 23 22 6 48 48 H 1.07996 * 119.66801 * 179.97438 * 24 23 22 49 49 H 1.07995 * 119.73538 * 180.02562 * 25 24 23 50 50 H 1.07999 * 120.11907 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.4604 -0.1375 2.3232 6 7 2.8020 -1.0989 3.2350 7 6 3.4057 -0.8401 4.5445 8 6 4.9040 -0.9626 4.4399 9 8 5.4172 -1.2383 3.3762 10 7 5.6740 -0.7656 5.5285 11 6 5.4466 -0.4283 6.9434 12 6 6.8539 0.1873 6.9726 13 6 7.1053 -0.7982 5.8290 14 6 8.1449 -0.5007 4.7456 15 6 8.3322 -2.0238 4.6267 16 6 9.7696 -2.4432 4.4572 17 7 10.1789 -3.6309 4.1038 18 6 11.5192 -3.6404 4.0542 19 6 11.9573 -2.4120 4.3901 20 7 10.8476 -1.6506 4.6401 21 6 7.8283 -2.1244 6.0775 22 6 2.4928 -2.3456 2.7389 23 6 2.6270 -3.6360 3.2402 24 6 2.2136 -4.7106 2.4833 25 6 1.6621 -4.5192 1.2241 26 6 1.5207 -3.2599 0.7124 27 6 1.9334 -2.1569 1.4618 28 1 -0.3933 0.4417 0.7651 29 1 1.7924 -0.5139 -0.8899 30 1 1.5616 2.4679 -1.2085 31 1 1.5879 2.4586 1.2241 32 1 2.5924 0.9251 2.4637 33 1 3.1454 0.1663 4.8722 34 1 3.0315 -1.5655 5.2669 35 1 4.6510 0.3016 7.0926 36 1 5.3415 -1.3025 7.5859 37 1 6.8901 1.2368 6.6806 38 1 7.4188 -0.0287 7.8795 39 1 7.7250 -0.0406 3.8511 40 1 9.0270 0.0207 5.1173 41 1 7.6662 -2.4898 3.9004 42 1 12.1386 -4.4853 3.7917 43 1 12.9861 -2.0885 4.4461 44 1 10.8375 -0.7167 4.9024 45 1 8.6219 -2.0570 6.8217 46 1 7.1549 -2.9638 6.2510 47 1 3.0546 -3.7952 4.2192 48 1 2.3191 -5.7118 2.8741 49 1 1.3428 -5.3722 0.6439 50 1 1.0910 -3.1186 -0.2684 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15706034_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:16:05 Heat of formation + Delta-G solvation = 144.880347 kcal Electronic energy + Delta-G solvation = -34784.493531 eV Core-core repulsion = 30361.873770 eV Total energy + Delta-G solvation = -4422.619761 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.168 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -43.18024 -42.53434 -42.06126 -39.48113 -38.01222 -37.53773 -37.08692 -34.05082 -33.37380 -31.86385 -30.89136 -30.33508 -30.10746 -28.68385 -27.20280 -26.15050 -25.69834 -23.85661 -23.60372 -23.00831 -22.27180 -21.93969 -21.16636 -20.57904 -19.32394 -19.02780 -18.51135 -17.94191 -17.70926 -17.36350 -17.00358 -16.91800 -16.28942 -16.19646 -15.99290 -15.77882 -15.62014 -15.39955 -15.20807 -14.85657 -14.73651 -14.56885 -14.53827 -14.29741 -14.06380 -13.99193 -13.89207 -13.66542 -13.55990 -13.33911 -13.20553 -12.80565 -12.58559 -12.44932 -12.37704 -12.27573 -11.86996 -11.85567 -11.62070 -11.40120 -11.00419 -10.90924 -10.89172 -10.40611 -10.34818 -9.95713 -9.28586 -9.01165 -8.52332 -4.86783 0.28993 0.79078 1.11630 1.20131 1.37319 1.38873 1.61286 1.69956 1.84603 2.02283 2.14853 2.24781 2.89088 3.07710 3.16264 3.20480 3.26663 3.34847 3.50326 3.59164 3.61856 3.71967 3.79392 3.82633 3.86528 3.94265 3.98059 4.07374 4.13792 4.18252 4.33550 4.34135 4.38721 4.46932 4.52192 4.54360 4.56324 4.60480 4.67708 4.72808 4.74244 4.82372 4.87484 4.91789 4.92480 5.01364 5.13371 5.24953 5.27552 5.66684 5.82424 5.85610 5.87922 5.91535 6.23613 6.36611 6.41372 6.45381 6.60008 6.91524 7.22375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.192 4.192 5 C 0.065 3.935 6 N -0.466 5.466 7 C 0.100 3.900 8 C 0.520 3.480 9 O -0.503 6.503 10 N -0.627 5.627 11 C 0.098 3.902 12 C -0.138 4.138 13 C 0.141 3.859 14 C -0.134 4.134 15 C -0.017 4.017 16 C 0.221 3.779 17 N -0.486 5.486 18 C -0.027 4.027 19 C -0.057 4.057 20 N -0.566 5.566 21 C -0.120 4.120 22 C 0.109 3.891 23 C -0.127 4.127 24 C -0.095 4.095 25 C -0.145 4.145 26 C -0.065 4.065 27 C -0.086 4.086 28 H 0.372 0.628 29 H 0.114 0.886 30 H -0.255 1.255 31 H -0.261 1.261 32 H 0.168 0.832 33 H 0.120 0.880 34 H 0.116 0.884 35 H 0.084 0.916 36 H 0.091 0.909 37 H 0.101 0.899 38 H 0.096 0.904 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.124 0.876 42 H 0.171 0.829 43 H 0.178 0.822 44 H 0.416 0.584 45 H 0.100 0.900 46 H 0.083 0.917 47 H 0.114 0.886 48 H 0.125 0.875 49 H 0.123 0.877 50 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.829 5.294 8.472 10.383 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.147 4.147 3 Si 0.583 3.417 4 C -0.199 4.199 5 C -0.059 4.059 6 N -0.150 5.150 7 C -0.026 4.026 8 C 0.307 3.693 9 O -0.376 6.376 10 N -0.364 5.364 11 C -0.024 4.024 12 C -0.175 4.175 13 C 0.055 3.945 14 C -0.173 4.173 15 C -0.037 4.037 16 C -0.043 4.043 17 N -0.205 5.205 18 C -0.175 4.175 19 C -0.191 4.191 20 N -0.170 5.170 21 C -0.159 4.159 22 C 0.005 3.995 23 C -0.148 4.148 24 C -0.114 4.114 25 C -0.164 4.164 26 C -0.083 4.083 27 C -0.090 4.090 28 H 0.219 0.781 29 H 0.132 0.868 30 H -0.180 1.180 31 H -0.185 1.185 32 H 0.185 0.815 33 H 0.138 0.862 34 H 0.134 0.866 35 H 0.102 0.898 36 H 0.109 0.891 37 H 0.120 0.880 38 H 0.114 0.886 39 H 0.108 0.892 40 H 0.107 0.893 41 H 0.142 0.858 42 H 0.188 0.812 43 H 0.195 0.805 44 H 0.255 0.745 45 H 0.118 0.882 46 H 0.102 0.898 47 H 0.132 0.868 48 H 0.143 0.857 49 H 0.141 0.859 50 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 2.465 4.996 7.191 9.096 hybrid contribution -0.213 0.791 0.977 1.275 sum 2.251 5.787 8.168 10.260 Atomic orbital electron populations 1.86608 1.18141 1.79960 1.48940 1.24281 0.83286 1.09802 0.97373 0.95033 0.91803 0.74506 0.80358 1.20577 1.09713 0.92357 0.97283 1.21560 1.01014 0.93962 0.89397 1.43217 1.52571 1.04734 1.14451 1.21467 0.90358 1.05645 0.85145 1.20618 0.88697 0.76994 0.82954 1.90825 1.74153 1.45668 1.26972 1.49521 1.07496 1.70282 1.09072 1.23050 0.98678 0.99778 0.80931 1.23304 0.96395 0.99469 0.98367 1.22339 0.81837 0.96187 0.94106 1.23142 0.98375 0.95795 0.99982 1.20931 0.88014 0.96090 0.98711 1.22942 0.90549 0.87124 1.03713 1.70263 1.11783 1.19609 1.18857 1.22428 0.91205 0.97376 1.06450 1.22802 0.92427 0.93467 1.10381 1.43262 1.06638 1.13457 1.53645 1.23227 0.99648 0.96653 0.96407 1.18163 1.01231 0.85800 0.94319 1.19950 1.04961 0.89256 1.00625 1.20832 0.98198 0.97948 0.94464 1.20676 1.02375 0.96953 0.96391 1.20308 0.97958 0.90914 0.99167 1.18931 1.03405 0.92764 0.93897 0.78057 0.86779 1.18003 1.18544 0.81529 0.86220 0.86568 0.89769 0.89065 0.88017 0.88566 0.89190 0.89253 0.85845 0.81189 0.80467 0.74550 0.88162 0.89832 0.86824 0.85697 0.85897 0.85904 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.47 12.88 -35.23 -0.45 -1.93 16 2 C -0.04 -0.06 3.06 36.01 0.11 0.05 16 3 Si 0.68 0.04 30.82 -169.99 -5.24 -5.20 16 4 C -0.19 -0.51 5.57 -102.71 -0.57 -1.09 16 5 C 0.07 0.08 9.89 -16.73 -0.17 -0.08 16 6 N -0.47 -0.75 2.27 -115.71 -0.26 -1.01 16 7 C 0.10 -0.18 6.32 -5.20 -0.03 -0.21 16 8 C 0.52 0.21 8.14 -10.99 -0.09 0.12 16 9 O -0.50 -2.43 16.20 5.55 0.09 -2.34 16 10 N -0.63 1.35 3.69 -173.31 -0.64 0.71 16 11 C 0.10 -0.54 8.42 -9.78 -0.08 -0.62 16 12 C -0.14 0.76 8.25 -26.38 -0.22 0.54 16 13 C 0.14 -0.38 1.44 -138.30 -0.20 -0.58 16 14 C -0.13 0.21 7.11 -26.22 -0.19 0.02 16 15 C -0.02 -0.02 4.29 -90.82 -0.39 -0.41 16 16 C 0.22 0.55 7.36 -155.41 -1.14 -0.60 16 17 N -0.49 -2.62 11.25 -10.81 -0.12 -2.74 16 18 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 19 C -0.06 -0.02 12.04 -16.56 -0.20 -0.22 16 20 N -0.57 0.12 5.94 -10.23 -0.06 0.06 16 21 C -0.12 0.19 7.51 -26.22 -0.20 -0.01 16 22 C 0.11 0.41 6.80 -83.99 -0.57 -0.16 16 23 C -0.13 -0.39 10.00 -39.43 -0.39 -0.78 16 24 C -0.10 -0.26 10.01 -39.54 -0.40 -0.65 16 25 C -0.14 -0.44 9.97 -39.95 -0.40 -0.84 16 26 C -0.06 -0.26 10.05 -39.65 -0.40 -0.66 16 27 C -0.09 -0.38 6.35 -105.14 -0.67 -1.05 16 28 H 0.37 -0.11 8.70 45.56 0.40 0.28 16 29 H 0.11 0.19 7.96 -51.93 -0.41 -0.22 16 30 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 31 H -0.26 -0.22 6.99 56.52 0.40 0.17 16 32 H 0.17 -0.24 6.27 -52.49 -0.33 -0.57 16 33 H 0.12 -0.57 8.12 -51.93 -0.42 -0.99 16 34 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 35 H 0.08 -0.60 8.14 -51.93 -0.42 -1.02 16 36 H 0.09 -0.57 8.14 -51.93 -0.42 -0.99 16 37 H 0.10 -0.58 8.14 -51.93 -0.42 -1.00 16 38 H 0.10 -0.64 8.14 -51.93 -0.42 -1.06 16 39 H 0.09 0.06 7.84 -51.93 -0.41 -0.35 16 40 H 0.09 -0.35 6.63 -51.93 -0.34 -0.69 16 41 H 0.12 0.50 7.75 -51.93 -0.40 0.10 16 42 H 0.17 0.17 8.06 -52.48 -0.42 -0.25 16 43 H 0.18 -0.51 8.06 -52.49 -0.42 -0.94 16 44 H 0.42 -1.42 7.52 -40.82 -0.31 -1.73 16 45 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 46 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 47 H 0.11 0.15 8.06 -52.48 -0.42 -0.28 16 48 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 49 H 0.12 0.14 8.06 -52.49 -0.42 -0.29 16 50 H 0.12 0.37 8.06 -52.49 -0.42 -0.05 16 LS Contribution 417.67 15.07 6.29 6.29 Total: 0.00 -12.58 417.67 -13.72 -26.31 By element: Atomic # 1 Polarization: -5.72 SS G_CDS: -6.93 Total: -12.65 kcal Atomic # 6 Polarization: -1.11 SS G_CDS: -6.40 Total: -7.52 kcal Atomic # 7 Polarization: -1.89 SS G_CDS: -1.08 Total: -2.97 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -0.36 Total: -4.27 kcal Atomic # 14 Polarization: 0.04 SS G_CDS: -5.24 Total: -5.20 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -12.58 -13.72 -26.31 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15706034_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 171.187 kcal (2) G-P(sol) polarization free energy of solvation -12.584 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 158.603 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.307 kcal (6) G-S(sol) free energy of system = (1) + (5) 144.880 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds