Wall clock time and date at job start Sun Mar 7 2021 04:14:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.35535 * 125.67696 * 2 1 4 4 C 1.35453 * 108.87220 * 180.17673 * 3 2 1 5 5 C 1.50700 * 126.06865 * 179.83419 * 4 3 2 6 6 O 1.42891 * 109.47002 * 244.68961 * 5 4 3 7 7 Si 1.86304 * 109.46987 * 4.68692 * 5 4 3 8 8 H 1.48504 * 109.47018 * 179.97438 * 7 5 4 9 9 H 1.48499 * 109.46921 * 300.00030 * 7 5 4 10 10 H 1.48497 * 109.46971 * 60.00037 * 7 5 4 11 11 C 1.39835 * 107.86040 * 359.56469 * 4 3 2 12 12 C 1.37644 * 125.68032 * 179.69769 * 2 1 3 13 13 C 1.46684 * 126.23298 * 0.03084 * 12 2 1 14 14 O 1.21697 * 119.99889 * 23.24234 * 13 12 2 15 15 N 1.34770 * 120.00096 * 203.24618 * 13 12 2 16 16 C 1.46406 * 118.75446 * 6.26266 * 15 13 12 17 17 C 1.53914 * 109.06688 * 253.45205 * 16 15 13 18 18 Si 1.85199 * 107.12449 * 308.57454 * 17 16 15 19 19 C 1.87456 * 111.52299 * 168.31739 * 18 17 16 20 20 C 1.55682 * 100.84600 * 114.79665 * 19 18 17 21 21 C 1.53773 * 111.39969 * 27.99810 * 20 19 18 22 22 C 1.56390 * 109.77474 * 312.17107 * 21 20 19 23 23 C 1.85199 * 110.14409 * 43.93378 * 18 17 16 24 24 C 1.46402 * 118.75572 * 186.53476 * 15 13 12 25 25 H 1.09003 * 109.47199 * 264.78005 * 1 2 3 26 26 H 1.08998 * 109.47277 * 24.77771 * 1 2 3 27 27 H 1.09002 * 109.47137 * 144.77910 * 1 2 3 28 28 H 1.08005 * 125.56202 * 0.02562 * 3 2 1 29 29 H 1.08998 * 109.46881 * 124.68419 * 5 4 3 30 30 H 0.96703 * 114.00363 * 180.02562 * 6 5 4 31 31 H 1.08002 * 126.45307 * 180.24496 * 11 4 3 32 32 H 1.08995 * 109.58595 * 13.20138 * 16 15 13 33 33 H 1.09000 * 109.58167 * 133.62519 * 16 15 13 34 34 H 1.08998 * 110.00168 * 189.12277 * 17 16 15 35 35 H 1.08998 * 109.83769 * 67.93126 * 17 16 15 36 36 H 1.09000 * 111.13983 * 232.69504 * 19 18 17 37 37 H 1.09001 * 111.14168 * 356.89625 * 19 18 17 38 38 H 1.09002 * 109.10601 * 267.48164 * 20 19 18 39 39 H 1.09007 * 109.10185 * 148.50828 * 20 19 18 40 40 H 1.09006 * 109.42173 * 192.08467 * 21 20 19 41 41 H 1.08995 * 109.42485 * 72.26632 * 21 20 19 42 42 H 1.09002 * 111.49402 * 281.94600 * 22 21 20 43 43 H 1.08996 * 111.49579 * 156.82915 * 22 21 20 44 44 H 1.08993 * 109.92726 * 196.56275 * 23 18 17 45 45 H 1.09003 * 109.92094 * 75.36633 * 23 18 17 46 46 H 1.08999 * 109.58796 * 226.37101 * 24 15 13 47 47 H 1.08997 * 109.58583 * 346.80311 * 24 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7094 -0.0040 5 6 4.7536 1.6190 -0.0089 6 8 5.4769 1.4460 -1.2290 7 14 4.1926 3.3897 0.1348 8 1 5.3766 4.2860 0.1306 9 1 3.3132 3.7250 -1.0138 10 1 3.4409 3.5694 1.4028 11 6 3.5779 -0.6887 0.0036 12 6 2.2678 -1.1180 0.0059 13 6 1.8124 -2.5124 0.0126 14 8 0.7031 -2.7922 -0.4024 15 7 2.6224 -3.4836 0.4784 16 6 3.8932 -3.1038 1.0983 17 6 5.0443 -3.4453 0.1353 18 14 4.8239 -5.2126 -0.3728 19 6 5.9429 -5.6600 -1.8086 20 6 6.8777 -6.7077 -1.1361 21 6 6.1683 -7.4323 0.0200 22 6 5.4627 -6.3876 0.9455 23 6 3.0455 -5.5456 -0.7680 24 6 2.2010 -4.8788 0.3401 25 1 -0.3634 -0.0935 1.0234 26 1 -0.3634 0.9330 -0.4307 27 1 -0.3633 -0.8395 -0.5927 28 1 1.9081 2.1236 0.0004 29 1 5.3991 1.3728 0.8343 30 1 6.2653 2.0015 -1.3011 31 1 4.4583 -1.3143 0.0066 32 1 3.8956 -2.0327 1.3001 33 1 4.0238 -3.6536 2.0303 34 1 6.0022 -3.3206 0.6402 35 1 4.9980 -2.7984 -0.7407 36 1 5.3753 -6.1063 -2.6252 37 1 6.5071 -4.7930 -2.1524 38 1 7.7623 -6.2010 -0.7502 39 1 7.1858 -7.4412 -1.8812 40 1 6.9009 -7.9936 0.5999 41 1 5.4246 -8.1188 -0.3845 42 1 6.1749 -5.8956 1.6079 43 1 4.6454 -6.8396 1.5075 44 1 2.8622 -6.6199 -0.7790 45 1 2.7934 -5.1148 -1.7371 46 1 2.3564 -5.4027 1.2831 47 1 1.1461 -4.9166 0.0681 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15733048_10803934.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:14:33 Heat of formation + Delta-G solvation = -32.079615 kcal Electronic energy + Delta-G solvation = -26363.456975 eV Core-core repulsion = 22864.240835 eV Total energy + Delta-G solvation = -3499.216140 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 322.163 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.73259 -40.54516 -37.72114 -37.40328 -36.12259 -34.13666 -32.99159 -31.06688 -30.06535 -29.65750 -28.35158 -25.71259 -25.00411 -24.53315 -24.00511 -22.28521 -21.15584 -20.92370 -19.74348 -18.41810 -18.19359 -17.64468 -16.91086 -16.55398 -16.06854 -15.92865 -15.76480 -15.65016 -15.45689 -14.98968 -14.85518 -14.67936 -14.30621 -14.16768 -14.09475 -13.88407 -13.51004 -13.48029 -13.39302 -13.19814 -12.79869 -12.51699 -12.43018 -12.35992 -12.27652 -12.09136 -12.05888 -11.91692 -11.80311 -11.32990 -11.13462 -10.45235 -10.41573 -10.23659 -10.14627 -9.77381 -9.58861 -9.21795 0.39747 1.28270 1.45460 1.49570 1.57217 1.63966 1.79101 1.86570 1.96552 2.00839 2.15383 2.22510 2.66921 3.43825 3.68210 3.91683 3.99205 4.11009 4.13099 4.16108 4.17600 4.18556 4.28835 4.31183 4.37447 4.42093 4.46590 4.62606 4.65995 4.66909 4.69701 4.73065 4.73981 4.85629 4.88432 5.01871 5.14347 5.16026 5.19561 5.23411 5.32736 5.38099 5.41561 5.54447 5.55495 5.60650 5.70927 5.88784 6.11228 6.24002 6.98600 7.02548 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.415 5.415 3 C 0.017 3.983 4 C -0.182 4.182 5 C -0.044 4.044 6 O -0.566 6.566 7 Si 0.973 3.027 8 H -0.255 1.255 9 H -0.274 1.274 10 H -0.256 1.256 11 C -0.123 4.123 12 C -0.078 4.078 13 C 0.579 3.421 14 O -0.587 6.587 15 N -0.595 5.595 16 C 0.084 3.916 17 C -0.441 4.441 18 Si 1.059 2.941 19 C -0.425 4.425 20 C -0.122 4.122 21 C -0.127 4.127 22 C -0.403 4.403 23 C -0.443 4.443 24 C 0.117 3.883 25 H 0.085 0.915 26 H 0.111 0.889 27 H 0.084 0.916 28 H 0.186 0.814 29 H 0.094 0.906 30 H 0.395 0.605 31 H 0.180 0.820 32 H 0.111 0.889 33 H 0.104 0.896 34 H 0.118 0.882 35 H 0.080 0.920 36 H 0.067 0.933 37 H 0.079 0.921 38 H 0.066 0.934 39 H 0.053 0.947 40 H 0.064 0.936 41 H 0.062 0.938 42 H 0.090 0.910 43 H 0.085 0.915 44 H 0.097 0.903 45 H 0.060 0.940 46 H 0.104 0.896 47 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.283 1.720 4.259 6.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.088 5.088 3 C -0.120 4.120 4 C -0.188 4.188 5 C -0.155 4.155 6 O -0.375 6.375 7 Si 0.797 3.203 8 H -0.179 1.179 9 H -0.198 1.198 10 H -0.180 1.180 11 C -0.149 4.149 12 C -0.191 4.191 13 C 0.370 3.630 14 O -0.469 6.469 15 N -0.326 5.326 16 C -0.037 4.037 17 C -0.527 4.527 18 Si 1.249 2.751 19 C -0.509 4.509 20 C -0.160 4.160 21 C -0.165 4.165 22 C -0.490 4.490 23 C -0.527 4.527 24 C -0.004 4.004 25 H 0.104 0.896 26 H 0.129 0.871 27 H 0.102 0.898 28 H 0.203 0.797 29 H 0.112 0.888 30 H 0.244 0.756 31 H 0.197 0.803 32 H 0.129 0.871 33 H 0.122 0.878 34 H 0.136 0.864 35 H 0.098 0.902 36 H 0.086 0.914 37 H 0.098 0.902 38 H 0.085 0.915 39 H 0.072 0.928 40 H 0.083 0.917 41 H 0.081 0.919 42 H 0.108 0.892 43 H 0.103 0.897 44 H 0.116 0.884 45 H 0.079 0.921 46 H 0.122 0.878 47 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 2.512 1.951 4.020 5.126 hybrid contribution 0.220 -0.237 -0.520 0.612 sum 2.731 1.714 3.500 4.759 Atomic orbital electron populations 1.22414 0.75022 1.05910 1.04670 1.43983 1.07556 1.04800 1.52413 1.22178 0.90395 0.92236 1.07180 1.19058 0.92944 0.94506 1.12319 1.24032 0.93586 1.07906 0.89960 1.86482 1.44118 1.68808 1.38068 0.85409 0.80543 0.74559 0.79754 1.17897 1.19836 1.18011 1.22088 0.95162 0.94953 1.02690 1.20163 0.91185 0.87505 1.20225 1.17410 0.84034 0.84583 0.77003 1.90749 1.21951 1.84077 1.50144 1.47881 1.20677 1.05969 1.58084 1.22263 0.80415 1.04585 0.96404 1.26720 1.01935 1.19720 1.04314 0.78650 0.63667 0.65858 0.66907 1.26686 1.09733 1.02835 1.11692 1.21880 0.99081 0.97923 0.97072 1.22067 0.99874 0.98594 0.95937 1.26692 1.05665 1.09060 1.07565 1.26895 1.20307 1.04436 1.01092 1.21429 0.99739 0.79169 1.00095 0.89605 0.87059 0.89771 0.79744 0.88811 0.75562 0.80276 0.87128 0.87809 0.86369 0.90167 0.91373 0.90224 0.91492 0.92777 0.91689 0.91940 0.89175 0.89669 0.88428 0.92072 0.87767 0.91050 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.12 10.72 127.77 1.37 1.49 16 2 N -0.42 -2.45 3.16 -534.31 -1.69 -4.14 16 3 C 0.02 0.05 9.93 83.48 0.83 0.88 16 4 C -0.18 -0.62 5.46 -20.12 -0.11 -0.73 16 5 C -0.04 0.07 3.01 71.24 0.21 0.28 16 6 O -0.57 0.02 12.85 -148.98 -1.92 -1.90 16 7 Si 0.97 -2.31 25.88 68.60 1.78 -0.53 16 8 H -0.26 0.63 7.11 99.48 0.71 1.34 16 9 H -0.27 -0.39 7.11 99.48 0.71 0.32 16 10 H -0.26 0.41 7.11 99.48 0.71 1.12 16 11 C -0.12 -0.52 8.31 22.57 0.19 -0.34 16 12 C -0.08 -0.60 6.41 40.35 0.26 -0.34 16 13 C 0.58 5.56 7.49 86.45 0.65 6.21 16 14 O -0.59 -9.46 14.26 -4.34 -0.06 -9.52 16 15 N -0.59 -1.65 2.56 -822.36 -2.10 -3.76 16 16 C 0.08 -0.29 5.19 86.71 0.45 0.16 16 17 C -0.44 2.39 4.35 72.29 0.31 2.71 16 18 Si 1.06 -5.34 10.74 68.60 0.74 -4.61 16 19 C -0.42 0.56 5.84 72.91 0.43 0.99 16 20 C -0.12 0.14 6.09 31.78 0.19 0.34 16 21 C -0.13 0.30 5.97 32.04 0.19 0.50 16 22 C -0.40 2.16 5.95 73.16 0.43 2.60 16 23 C -0.44 0.20 5.21 72.48 0.38 0.58 16 24 C 0.12 0.17 5.96 86.89 0.52 0.69 16 25 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 26 H 0.11 -0.40 8.12 -2.39 -0.02 -0.42 16 27 H 0.08 0.56 6.42 -2.39 -0.02 0.55 16 28 H 0.19 -0.32 6.21 -2.91 -0.02 -0.34 16 29 H 0.09 -0.57 7.96 -2.39 -0.02 -0.59 16 30 H 0.39 -3.63 8.74 -74.06 -0.65 -4.27 16 31 H 0.18 0.06 3.72 -2.91 -0.01 0.05 16 32 H 0.11 -0.29 4.11 -2.39 -0.01 -0.30 16 33 H 0.10 -0.83 8.08 -2.39 -0.02 -0.85 16 34 H 0.12 -1.13 7.97 -2.39 -0.02 -1.14 16 35 H 0.08 -0.23 6.60 -2.39 -0.02 -0.24 16 36 H 0.07 0.02 8.03 -2.39 -0.02 0.00 16 37 H 0.08 -0.11 8.03 -2.39 -0.02 -0.13 16 38 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 39 H 0.05 0.01 8.14 -2.38 -0.02 -0.01 16 40 H 0.06 -0.14 8.14 -2.38 -0.02 -0.16 16 41 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 42 H 0.09 -0.61 8.04 -2.39 -0.02 -0.63 16 43 H 0.08 -0.53 8.04 -2.39 -0.02 -0.55 16 44 H 0.10 -0.24 7.97 -2.39 -0.02 -0.26 16 45 H 0.06 0.23 7.97 -2.39 -0.02 0.21 16 46 H 0.10 -0.43 8.08 -2.39 -0.02 -0.45 16 47 H 0.07 0.49 6.87 -2.39 -0.02 0.47 16 Total: 0.00 -19.23 358.33 4.12 -15.11 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: 1.08 Total: -6.67 kcal Atomic # 6 Polarization: 9.71 SS G_CDS: 6.30 Total: 16.01 kcal Atomic # 7 Polarization: -4.10 SS G_CDS: -3.79 Total: -7.89 kcal Atomic # 8 Polarization: -9.44 SS G_CDS: -1.98 Total: -11.41 kcal Atomic # 14 Polarization: -7.65 SS G_CDS: 2.51 Total: -5.14 kcal Total: -19.23 4.12 -15.11 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15733048_10803934.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.970 kcal (2) G-P(sol) polarization free energy of solvation -19.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.204 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.124 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.109 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds