Wall clock time and date at job start Sun Mar 7 2021 04:20:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47129 * 2 1 4 4 H 1.48503 * 109.46913 * 180.02562 * 3 2 1 5 5 H 1.48497 * 109.47198 * 300.00791 * 3 2 1 6 6 H 1.48502 * 109.46946 * 60.00520 * 3 2 1 7 7 C 1.50692 * 109.47363 * 120.00527 * 2 1 3 8 8 C 1.37857 * 119.89159 * 65.30138 * 7 2 1 9 9 C 1.39660 * 119.87528 * 180.23051 * 8 7 2 10 10 C 1.47698 * 120.16628 * 179.73952 * 9 8 7 11 11 O 1.21567 * 120.00383 * 226.20953 * 10 9 8 12 12 N 1.34779 * 119.99737 * 46.20446 * 10 9 8 13 13 C 1.46395 * 118.75453 * 176.87094 * 12 10 9 14 14 C 1.54457 * 108.77210 * 106.56398 * 13 12 10 15 15 Si 1.85201 * 107.11287 * 51.55957 * 14 13 12 16 16 C 1.87773 * 111.35990 * 191.90336 * 15 14 13 17 17 C 1.56394 * 98.98098 * 221.49431 * 16 15 14 18 18 C 1.53785 * 109.77367 * 39.37237 * 17 16 15 19 19 C 1.55679 * 111.40003 * 312.18223 * 18 17 16 20 20 C 1.85205 * 110.13767 * 315.95598 * 15 14 13 21 21 C 1.46402 * 118.75524 * 356.85184 * 12 10 9 22 22 C 1.39816 * 119.67090 * 359.46780 * 9 8 7 23 23 F 1.35101 * 120.11224 * 180.29397 * 22 9 8 24 24 C 1.38323 * 119.78076 * 0.27316 * 22 9 8 25 25 C 1.38205 * 120.11354 * 359.97438 * 24 22 9 26 26 H 0.96692 * 114.00361 * 59.99216 * 1 2 3 27 27 H 1.09008 * 109.46791 * 240.00822 * 2 1 3 28 28 H 1.07996 * 120.06258 * 359.97305 * 8 7 2 29 29 H 1.08997 * 109.59151 * 346.77842 * 13 12 10 30 30 H 1.08998 * 109.70756 * 226.42220 * 13 12 10 31 31 H 1.09004 * 109.92695 * 292.16191 * 14 13 12 32 32 H 1.09000 * 109.92779 * 170.96210 * 14 13 12 33 33 H 1.08999 * 111.49379 * 104.05112 * 16 15 14 34 34 H 1.09002 * 111.49537 * 338.93499 * 16 15 14 35 35 H 1.09006 * 109.41880 * 279.28308 * 17 16 15 36 36 H 1.08996 * 109.42621 * 159.46984 * 17 16 15 37 37 H 1.09001 * 109.09731 * 72.68773 * 18 17 16 38 38 H 1.08997 * 109.10335 * 191.66049 * 18 17 16 39 39 H 1.08997 * 111.14766 * 145.89852 * 19 18 17 40 40 H 1.09007 * 111.14372 * 270.10462 * 19 18 17 41 41 H 1.08997 * 109.92555 * 163.44117 * 20 15 14 42 42 H 1.08993 * 109.92159 * 284.64125 * 20 15 14 43 43 H 1.08997 * 109.58825 * 13.22066 * 21 12 10 44 44 H 1.09002 * 109.58417 * 133.64770 * 21 12 10 45 45 H 1.07997 * 119.94422 * 180.02562 * 24 22 9 46 46 H 1.08004 * 119.82968 * 180.02562 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 3.5351 1.7564 -0.0006 5 1 1.5549 2.4566 -1.2124 6 1 1.5551 2.4565 1.2126 7 6 1.9314 -0.7105 1.2303 8 6 1.6896 -2.0580 1.3924 9 6 2.1512 -2.7150 2.5350 10 6 1.8907 -4.1573 2.7180 11 8 1.4856 -4.5711 3.7869 12 7 2.1021 -5.0147 1.6998 13 6 1.9017 -6.4463 1.9314 14 6 0.5975 -6.8854 1.2301 15 14 0.6966 -6.2968 -0.5231 16 6 -0.9628 -6.4451 -1.3892 17 6 -0.4689 -6.9803 -2.7732 18 6 0.6704 -7.9917 -2.5634 19 6 1.7414 -7.4439 -1.5752 20 6 1.3327 -4.5583 -0.5770 21 6 2.5231 -4.4791 0.4039 22 6 2.8659 -2.0020 3.5023 23 9 3.3217 -2.6300 4.6082 24 6 3.1053 -0.6515 3.3229 25 6 2.6399 -0.0091 2.1912 26 1 -0.3933 0.4418 -0.7649 27 1 1.7923 -0.5138 -0.8901 28 1 1.1407 -2.6035 0.6392 29 1 1.8226 -6.6357 3.0018 30 1 2.7428 -7.0061 1.5225 31 1 -0.2614 -6.4329 1.7258 32 1 0.5110 -7.9717 1.2529 33 1 -1.4504 -5.4751 -1.4870 34 1 -1.6107 -7.1660 -0.8904 35 1 -0.1075 -6.1471 -3.3760 36 1 -1.2959 -7.4679 -3.2894 37 1 0.2564 -8.9174 -2.1636 38 1 1.1436 -8.2001 -3.5230 39 1 2.1699 -8.2467 -0.9751 40 1 2.5192 -6.8930 -2.1041 41 1 1.6661 -4.3158 -1.5860 42 1 0.5494 -3.8665 -0.2672 43 1 2.8319 -3.4403 0.5207 44 1 3.3547 -5.0685 0.0177 45 1 3.6575 -0.0983 4.0682 46 1 2.8298 1.0454 2.0556 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15733048_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:20:51 Heat of formation + Delta-G solvation = -110.715653 kcal Electronic energy + Delta-G solvation = -28163.990429 eV Core-core repulsion = 24284.647788 eV Total energy + Delta-G solvation = -3879.342641 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 337.142 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -49.89029 -41.63676 -39.93139 -37.63790 -37.31989 -36.26949 -33.64667 -32.58376 -31.78291 -30.43785 -29.83157 -26.70747 -25.73934 -24.92369 -24.31270 -23.90134 -22.47822 -21.14521 -20.32541 -18.87871 -18.77986 -18.35619 -17.81887 -17.26213 -16.55942 -16.42174 -16.23115 -16.12246 -15.94978 -15.71822 -15.62048 -15.16044 -14.84476 -14.49056 -14.42747 -14.31728 -14.17370 -13.99371 -13.85760 -13.62332 -13.56297 -13.16956 -12.80383 -12.67418 -12.61302 -12.51834 -12.40485 -12.26117 -12.17751 -12.04961 -11.85697 -11.46968 -10.97480 -10.69644 -10.52929 -10.51699 -10.38657 -10.11151 -9.83067 -9.69639 -0.36127 -0.04730 0.97305 1.29479 1.36171 1.55035 1.64056 1.64541 1.72812 1.76688 1.88726 2.31930 2.49743 3.05363 3.17748 3.24932 3.53933 3.63315 3.86831 3.90441 3.96896 4.01210 4.03613 4.06582 4.17165 4.20189 4.26634 4.32068 4.38719 4.51220 4.52378 4.56741 4.62912 4.73265 4.74685 4.81794 4.90009 4.92931 4.98069 5.00961 5.07047 5.10132 5.16374 5.24851 5.29217 5.40825 5.42302 5.50929 5.59474 6.21281 6.42260 7.10734 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.080 4.080 3 Si 0.940 3.060 4 H -0.246 1.246 5 H -0.253 1.253 6 H -0.245 1.245 7 C -0.094 4.094 8 C -0.041 4.041 9 C -0.168 4.168 10 C 0.560 3.440 11 O -0.518 6.518 12 N -0.607 5.607 13 C 0.121 3.879 14 C -0.430 4.430 15 Si 1.000 3.000 16 C -0.405 4.405 17 C -0.121 4.121 18 C -0.118 4.118 19 C -0.405 4.405 20 C -0.437 4.437 21 C 0.101 3.899 22 C 0.155 3.845 23 F -0.120 7.120 24 C -0.151 4.151 25 C -0.071 4.071 26 H 0.383 0.617 27 H 0.081 0.919 28 H 0.154 0.846 29 H 0.097 0.903 30 H 0.078 0.922 31 H 0.082 0.918 32 H 0.090 0.910 33 H 0.078 0.922 34 H 0.079 0.921 35 H 0.063 0.937 36 H 0.065 0.935 37 H 0.061 0.939 38 H 0.063 0.937 39 H 0.079 0.921 40 H 0.077 0.923 41 H 0.096 0.904 42 H 0.086 0.914 43 H 0.097 0.903 44 H 0.083 0.917 45 H 0.149 0.851 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.724 2.104 -7.016 7.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.191 4.191 3 Si 0.762 3.238 4 H -0.170 1.170 5 H -0.176 1.176 6 H -0.168 1.168 7 C -0.094 4.094 8 C -0.059 4.059 9 C -0.172 4.172 10 C 0.347 3.653 11 O -0.394 6.394 12 N -0.341 5.341 13 C -0.001 4.001 14 C -0.517 4.517 15 Si 1.193 2.807 16 C -0.492 4.492 17 C -0.159 4.159 18 C -0.156 4.156 19 C -0.491 4.491 20 C -0.523 4.523 21 C -0.021 4.021 22 C 0.135 3.865 23 F -0.098 7.098 24 C -0.170 4.170 25 C -0.089 4.089 26 H 0.230 0.770 27 H 0.099 0.901 28 H 0.171 0.829 29 H 0.115 0.885 30 H 0.097 0.903 31 H 0.101 0.899 32 H 0.109 0.891 33 H 0.097 0.903 34 H 0.098 0.902 35 H 0.082 0.918 36 H 0.084 0.916 37 H 0.080 0.920 38 H 0.081 0.919 39 H 0.098 0.902 40 H 0.096 0.904 41 H 0.114 0.886 42 H 0.105 0.895 43 H 0.115 0.885 44 H 0.102 0.898 45 H 0.167 0.833 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.962 2.370 -5.800 6.566 hybrid contribution -0.241 -0.273 -0.462 0.588 sum 1.721 2.097 -6.262 6.824 Atomic orbital electron populations 1.86520 1.16868 1.81733 1.49789 1.24695 0.86048 1.10688 0.97649 0.85816 0.80847 0.75315 0.81791 1.16979 1.17645 1.16834 1.19227 1.00162 0.93720 0.96341 1.21433 0.95451 0.93869 0.95172 1.19995 1.05324 0.94921 0.96962 1.18149 0.77682 0.85358 0.84063 1.90838 1.44206 1.78280 1.26033 1.47973 1.67752 1.07229 1.11136 1.21333 0.96960 0.78577 1.03199 1.26673 1.00413 1.06230 1.18366 0.79536 0.68353 0.66514 0.66274 1.26634 1.14428 1.03806 1.04289 1.22025 0.97845 0.98801 0.97200 1.21839 0.95114 0.98973 0.99681 1.26508 1.04384 1.10363 1.07858 1.26797 1.03374 1.19812 1.02330 1.21817 0.96766 1.01480 0.82044 1.17657 0.95263 0.90551 0.83045 1.91590 1.86113 1.82344 1.49775 1.21068 1.03585 0.92459 0.99854 1.21062 0.95657 0.99884 0.92336 0.76951 0.90085 0.82890 0.88485 0.90326 0.89871 0.89142 0.90290 0.90233 0.91814 0.91634 0.91980 0.91859 0.90239 0.90393 0.88570 0.89537 0.88497 0.89850 0.83303 0.84718 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.86 12.81 -35.23 -0.45 0.41 16 2 C -0.08 0.19 2.79 36.00 0.10 0.29 16 3 Si 0.94 -2.23 25.13 -169.99 -4.27 -6.50 16 4 H -0.25 0.50 7.11 56.52 0.40 0.90 16 5 H -0.25 0.52 7.11 56.52 0.40 0.92 16 6 H -0.24 0.21 7.04 56.52 0.40 0.61 16 7 C -0.09 0.02 5.38 -104.68 -0.56 -0.54 16 8 C -0.04 -0.02 6.93 -39.19 -0.27 -0.29 16 9 C -0.17 -0.45 5.02 -104.91 -0.53 -0.98 16 10 C 0.56 2.33 7.03 -12.39 -0.09 2.24 16 11 O -0.52 -4.19 15.82 5.31 0.08 -4.11 16 12 N -0.61 -0.53 2.55 -173.21 -0.44 -0.97 16 13 C 0.12 0.04 5.91 -3.33 -0.02 0.02 16 14 C -0.43 0.37 5.21 37.92 0.20 0.57 16 15 Si 1.00 -2.78 10.74 -169.99 -1.83 -4.61 16 16 C -0.40 0.58 5.94 38.98 0.23 0.82 16 17 C -0.12 0.15 5.97 -24.50 -0.15 0.01 16 18 C -0.12 0.15 6.09 -24.90 -0.15 0.00 16 19 C -0.40 0.92 5.84 38.58 0.23 1.14 16 20 C -0.44 1.36 4.71 37.92 0.18 1.54 16 21 C 0.10 -0.20 5.20 -3.33 -0.02 -0.22 16 22 C 0.16 0.47 7.25 -38.96 -0.28 0.19 16 23 F -0.12 -0.62 16.44 2.25 0.04 -0.58 16 24 C -0.15 -0.08 10.01 -39.56 -0.40 -0.47 16 25 C -0.07 0.03 8.66 -39.51 -0.34 -0.32 16 26 H 0.38 -2.25 8.74 45.56 0.40 -1.85 16 27 H 0.08 -0.38 7.96 -51.92 -0.41 -0.79 16 28 H 0.15 -0.16 4.27 -52.49 -0.22 -0.38 16 29 H 0.10 0.24 6.93 -51.93 -0.36 -0.12 16 30 H 0.08 -0.15 8.08 -51.93 -0.42 -0.57 16 31 H 0.08 0.05 7.97 -51.93 -0.41 -0.36 16 32 H 0.09 -0.15 7.97 -51.93 -0.41 -0.57 16 33 H 0.08 -0.12 8.04 -51.93 -0.42 -0.54 16 34 H 0.08 -0.08 8.04 -51.93 -0.42 -0.50 16 35 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.08 -0.18 8.03 -51.93 -0.42 -0.60 16 40 H 0.08 -0.21 8.03 -51.93 -0.42 -0.63 16 41 H 0.10 -0.44 7.97 -51.93 -0.41 -0.86 16 42 H 0.09 -0.23 6.01 -51.93 -0.31 -0.55 16 43 H 0.10 -0.21 4.50 -51.93 -0.23 -0.45 16 44 H 0.08 -0.30 8.08 -51.93 -0.42 -0.72 16 45 H 0.15 -0.24 8.06 -52.49 -0.42 -0.66 16 46 H 0.14 -0.29 4.84 -52.48 -0.25 -0.54 16 LS Contribution 358.78 15.07 5.41 5.41 Total: 0.00 -7.83 358.78 -9.40 -17.23 By element: Atomic # 1 Polarization: -4.20 SS G_CDS: -6.06 Total: -10.26 kcal Atomic # 6 Polarization: 5.87 SS G_CDS: -1.87 Total: 4.00 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.44 Total: -0.97 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.37 Total: -3.70 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.04 Total: -0.58 kcal Atomic # 14 Polarization: -5.01 SS G_CDS: -6.10 Total: -11.11 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -7.83 -9.40 -17.23 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15733048_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.488 kcal (2) G-P(sol) polarization free energy of solvation -7.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.396 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.228 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.716 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds