Wall clock time and date at job start Sun Mar 7 2021 04:37:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86300 * 109.46741 * 2 1 4 4 H 1.48495 * 109.47176 * 299.99824 * 3 2 1 5 5 H 1.48500 * 109.47163 * 60.00106 * 3 2 1 6 6 H 1.48504 * 109.46893 * 180.02562 * 3 2 1 7 7 C 1.50698 * 109.47194 * 240.00016 * 2 1 3 8 8 C 1.38186 * 119.84423 * 104.97438 * 7 2 1 9 9 C 1.38310 * 120.14687 * 179.69620 * 8 7 2 10 10 F 1.35098 * 120.08581 * 180.31938 * 9 8 7 11 11 C 1.39804 * 119.82932 * 0.58374 * 9 8 7 12 12 C 1.47698 * 120.15131 * 179.71903 * 11 9 8 13 13 O 1.21559 * 120.00355 * 33.90766 * 12 11 9 14 14 N 1.34777 * 119.99550 * 213.90759 * 12 11 9 15 15 C 1.46400 * 118.75259 * 175.53408 * 14 12 11 16 16 C 1.54459 * 108.77302 * 106.56323 * 15 14 12 17 17 Si 1.85197 * 107.11507 * 51.55582 * 16 15 14 18 18 C 1.87781 * 111.35855 * 191.90487 * 17 16 15 19 19 C 1.56393 * 98.97603 * 221.49469 * 18 17 16 20 20 C 1.53782 * 109.77716 * 39.37669 * 19 18 17 21 21 C 1.55686 * 111.39744 * 312.17463 * 20 19 18 22 22 C 1.85197 * 110.13928 * 315.95665 * 17 16 15 23 23 C 1.46394 * 118.76037 * 355.50574 * 14 12 11 24 24 C 1.39656 * 119.69050 * 359.44195 * 11 9 8 25 25 C 1.38071 * 119.85274 * 0.27789 * 24 11 9 26 26 F 1.35092 * 119.91502 * 179.97438 * 25 24 11 27 27 H 0.96691 * 114.00126 * 59.99872 * 1 2 3 28 28 H 1.09004 * 109.46928 * 119.99760 * 2 1 3 29 29 H 1.08000 * 119.92190 * 359.97438 * 8 7 2 30 30 H 1.08991 * 109.58958 * 346.77378 * 15 14 12 31 31 H 1.08997 * 109.70576 * 226.41581 * 15 14 12 32 32 H 1.09002 * 109.92126 * 292.16004 * 16 15 14 33 33 H 1.08995 * 109.92742 * 170.96647 * 16 15 14 34 34 H 1.08997 * 111.49176 * 104.05026 * 18 17 16 35 35 H 1.08996 * 111.49258 * 338.93891 * 18 17 16 36 36 H 1.08996 * 109.42137 * 279.28094 * 19 18 17 37 37 H 1.09005 * 109.41827 * 159.47146 * 19 18 17 38 38 H 1.09000 * 109.09953 * 72.68578 * 20 19 18 39 39 H 1.09001 * 109.10329 * 191.66273 * 20 19 18 40 40 H 1.09001 * 111.14595 * 145.89564 * 21 20 19 41 41 H 1.08994 * 111.14545 * 270.10501 * 21 20 19 42 42 H 1.08997 * 109.92484 * 163.43791 * 22 17 16 43 43 H 1.09001 * 109.93012 * 284.63850 * 22 17 16 44 44 H 1.09007 * 109.58618 * 13.22784 * 23 14 12 45 45 H 1.09007 * 109.58504 * 133.64821 * 23 14 12 46 46 H 1.08000 * 120.07074 * 180.25205 * 24 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 1.5550 2.4565 -1.2125 5 1 1.5549 2.4565 1.2125 6 1 3.5350 1.7565 -0.0006 7 6 1.9314 -0.7104 -1.2304 8 6 2.4526 0.0198 -2.2815 9 6 2.9212 -0.6261 -3.4111 10 9 3.4365 0.0886 -4.4352 11 6 2.8553 -2.0202 -3.4928 12 6 3.3479 -2.7169 -4.6984 13 8 4.3017 -2.2749 -5.3088 14 7 2.7399 -3.8427 -5.1217 15 6 3.1866 -4.4563 -6.3736 16 6 3.9856 -5.7361 -6.0425 17 14 2.9375 -6.7538 -4.9044 18 6 3.9226 -8.1578 -4.1398 19 6 2.8510 -9.2923 -4.2431 20 6 2.0997 -9.1783 -5.5800 21 6 1.6344 -7.7168 -5.8472 22 6 2.1774 -5.6767 -3.6037 23 6 1.6582 -4.4062 -4.3120 24 6 2.3267 -2.7513 -2.4267 25 6 1.8679 -2.0936 -1.3028 26 9 1.3559 -2.7995 -0.2710 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5138 0.8900 29 1 2.4983 1.0970 -2.2187 30 1 3.8237 -3.7578 -6.9159 31 1 2.3223 -4.7134 -6.9858 32 1 4.9214 -5.4726 -5.5495 33 1 4.1904 -6.2931 -6.9567 34 1 4.1810 -7.9457 -3.1024 35 1 4.8091 -8.3910 -4.7295 36 1 2.1427 -9.1977 -3.4201 37 1 3.3441 -10.2628 -4.1859 38 1 2.7589 -9.4961 -6.3878 39 1 1.2275 -9.8316 -5.5559 40 1 1.6655 -7.4825 -6.9113 41 1 0.6405 -7.5394 -5.4365 42 1 1.3494 -6.1999 -3.1254 43 1 2.9270 -5.4072 -2.8597 44 1 1.3409 -3.6763 -3.5672 45 1 0.8167 -4.6643 -4.9552 46 1 2.2765 -3.8288 -2.4816 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15733048_12360598.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:48 Heat of formation + Delta-G solvation = -137.727545 kcal Electronic energy + Delta-G solvation = -30536.775131 eV Core-core repulsion = 26186.807192 eV Total energy + Delta-G solvation = -4349.967940 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 355.133 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -50.07790 -50.04767 -41.82087 -40.00100 -37.80089 -37.50749 -36.29835 -34.14907 -32.24269 -31.43237 -30.65455 -29.86434 -27.79107 -25.19929 -24.86132 -24.37263 -24.19021 -22.97602 -21.23465 -20.88228 -19.36850 -19.02799 -18.58965 -17.87825 -17.64017 -17.03233 -16.96030 -16.51250 -16.48214 -16.23994 -16.13301 -16.09522 -15.79463 -15.73121 -15.32576 -15.00337 -14.82201 -14.46537 -14.38418 -14.26383 -13.91838 -13.84663 -13.65329 -13.60876 -13.16368 -12.93642 -12.78916 -12.61063 -12.54104 -12.35853 -12.29570 -12.25369 -12.08855 -11.96370 -11.49376 -11.11240 -10.85760 -10.68457 -10.57212 -10.44589 -10.30585 -9.92170 -9.74469 -0.78013 -0.37743 0.90110 1.24496 1.36344 1.39735 1.54060 1.57377 1.63398 1.75484 1.76298 2.10090 2.43568 2.75204 2.80543 3.01147 3.18456 3.26232 3.43257 3.67927 3.79066 3.83289 3.98152 4.00832 4.05368 4.13514 4.18456 4.25820 4.26986 4.29476 4.31170 4.47394 4.49548 4.53936 4.57354 4.62542 4.67438 4.69226 4.83483 4.92758 4.95322 5.02510 5.07301 5.21121 5.24265 5.33897 5.37686 5.39581 5.41314 6.07686 6.31790 6.95488 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.085 4.085 3 Si 0.948 3.052 4 H -0.247 1.247 5 H -0.244 1.244 6 H -0.243 1.243 7 C -0.103 4.103 8 C -0.143 4.143 9 C 0.155 3.845 10 F -0.111 7.111 11 C -0.138 4.138 12 C 0.558 3.442 13 O -0.512 6.512 14 N -0.605 5.605 15 C 0.121 3.879 16 C -0.430 4.430 17 Si 1.003 2.997 18 C -0.405 4.405 19 C -0.122 4.122 20 C -0.119 4.119 21 C -0.405 4.405 22 C -0.442 4.442 23 C 0.081 3.919 24 C -0.120 4.120 25 C 0.112 3.888 26 F -0.119 7.119 27 H 0.378 0.622 28 H 0.127 0.873 29 H 0.154 0.846 30 H 0.098 0.902 31 H 0.080 0.920 32 H 0.083 0.917 33 H 0.091 0.909 34 H 0.078 0.922 35 H 0.079 0.921 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.062 0.938 39 H 0.063 0.937 40 H 0.079 0.921 41 H 0.078 0.922 42 H 0.099 0.901 43 H 0.086 0.914 44 H 0.111 0.889 45 H 0.086 0.914 46 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.028 -1.801 0.730 3.598 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.195 4.195 3 Si 0.769 3.231 4 H -0.170 1.170 5 H -0.167 1.167 6 H -0.166 1.166 7 C -0.105 4.105 8 C -0.162 4.162 9 C 0.134 3.866 10 F -0.089 7.089 11 C -0.142 4.142 12 C 0.345 3.655 13 O -0.388 6.388 14 N -0.338 5.338 15 C 0.000 4.000 16 C -0.517 4.517 17 Si 1.197 2.803 18 C -0.492 4.492 19 C -0.159 4.159 20 C -0.156 4.156 21 C -0.491 4.491 22 C -0.528 4.528 23 C -0.041 4.041 24 C -0.138 4.138 25 C 0.093 3.907 26 F -0.097 7.097 27 H 0.225 0.775 28 H 0.145 0.855 29 H 0.171 0.829 30 H 0.116 0.884 31 H 0.098 0.902 32 H 0.102 0.898 33 H 0.110 0.890 34 H 0.097 0.903 35 H 0.098 0.902 36 H 0.082 0.918 37 H 0.084 0.916 38 H 0.080 0.920 39 H 0.082 0.918 40 H 0.098 0.902 41 H 0.096 0.904 42 H 0.118 0.882 43 H 0.105 0.895 44 H 0.128 0.872 45 H 0.104 0.896 46 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -2.131 -1.002 0.929 2.532 hybrid contribution -0.246 -0.460 -0.483 0.711 sum -2.377 -1.462 0.446 2.826 Atomic orbital electron populations 1.86604 1.16152 1.81512 1.49028 1.25073 0.85825 1.11356 0.97224 0.85690 0.81226 0.74265 0.81942 1.17042 1.16731 1.16604 1.20462 0.99711 0.92831 0.97469 1.21008 1.01327 1.01606 0.92217 1.17433 0.95618 0.87921 0.85630 1.91628 1.83452 1.77291 1.56481 1.19848 1.04938 0.92480 0.96973 1.17984 0.83049 0.80747 0.83689 1.90863 1.25941 1.65645 1.56337 1.47943 1.36029 1.25505 1.24316 1.21366 0.99261 0.95084 0.84335 1.26668 1.08400 1.05069 1.11525 0.79467 0.67866 0.66086 0.66895 1.26638 1.03911 1.11827 1.06815 1.22029 0.97078 0.99378 0.97448 1.21840 0.99894 0.96532 0.97356 1.26512 1.10311 1.04465 1.07849 1.26801 1.08227 1.06117 1.11670 1.22363 0.89376 0.96355 0.95991 1.22058 0.97458 1.03163 0.91139 1.17221 0.99073 0.88745 0.85695 1.91583 1.84147 1.77993 1.55960 0.77454 0.85534 0.82873 0.88384 0.90181 0.89810 0.89010 0.90311 0.90184 0.91770 0.91584 0.91951 0.91807 0.90198 0.90353 0.88248 0.89532 0.87188 0.89568 0.80373 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.52 12.88 -35.23 -0.45 0.06 16 2 C -0.08 0.13 2.44 36.00 0.09 0.22 16 3 Si 0.95 -1.83 25.48 -169.99 -4.33 -6.16 16 4 H -0.25 0.55 6.72 56.52 0.38 0.93 16 5 H -0.24 0.13 7.11 56.52 0.40 0.53 16 6 H -0.24 0.27 7.11 56.52 0.40 0.67 16 7 C -0.10 0.08 5.27 -104.49 -0.55 -0.47 16 8 C -0.14 0.06 8.62 -39.57 -0.34 -0.28 16 9 C 0.15 0.26 7.24 -38.97 -0.28 -0.02 16 10 F -0.11 -0.43 16.08 2.25 0.04 -0.39 16 11 C -0.14 -0.17 5.46 -104.92 -0.57 -0.75 16 12 C 0.56 1.54 7.28 -12.40 -0.09 1.45 16 13 O -0.51 -3.33 15.31 5.31 0.08 -3.25 16 14 N -0.60 0.10 2.55 -173.21 -0.44 -0.35 16 15 C 0.12 -0.08 5.90 -3.33 -0.02 -0.10 16 16 C -0.43 0.70 5.21 37.92 0.20 0.89 16 17 Si 1.00 -3.25 10.74 -169.99 -1.83 -5.08 16 18 C -0.41 0.70 5.94 38.98 0.23 0.93 16 19 C -0.12 0.17 5.97 -24.50 -0.15 0.02 16 20 C -0.12 0.17 6.10 -24.89 -0.15 0.02 16 21 C -0.40 1.04 5.84 38.59 0.23 1.26 16 22 C -0.44 1.55 4.45 37.92 0.17 1.72 16 23 C 0.08 -0.22 5.19 -3.34 -0.02 -0.24 16 24 C -0.12 0.08 7.32 -39.11 -0.29 -0.20 16 25 C 0.11 -0.02 7.23 -39.49 -0.29 -0.31 16 26 F -0.12 -0.09 16.73 2.25 0.04 -0.05 16 27 H 0.38 -1.73 8.70 45.56 0.40 -1.33 16 28 H 0.13 -0.26 7.89 -51.93 -0.41 -0.67 16 29 H 0.15 -0.30 4.86 -52.49 -0.25 -0.56 16 30 H 0.10 0.13 6.95 -51.93 -0.36 -0.23 16 31 H 0.08 -0.22 8.08 -51.93 -0.42 -0.64 16 32 H 0.08 -0.02 7.97 -51.93 -0.41 -0.43 16 33 H 0.09 -0.22 7.97 -51.93 -0.41 -0.63 16 34 H 0.08 -0.14 8.04 -51.93 -0.42 -0.56 16 35 H 0.08 -0.11 8.04 -51.93 -0.42 -0.53 16 36 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 38 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.08 -0.21 8.03 -51.93 -0.42 -0.63 16 41 H 0.08 -0.23 8.03 -51.93 -0.42 -0.64 16 42 H 0.10 -0.46 7.97 -51.93 -0.41 -0.88 16 43 H 0.09 -0.29 6.73 -51.93 -0.35 -0.64 16 44 H 0.11 -0.32 3.65 -55.97 -0.20 -0.52 16 45 H 0.09 -0.36 8.08 -51.93 -0.42 -0.78 16 46 H 0.18 -0.42 3.28 -52.49 -0.17 -0.60 16 LS Contribution 363.02 15.07 5.47 5.47 Total: 0.00 -6.89 363.02 -8.87 -15.77 By element: Atomic # 1 Polarization: -4.57 SS G_CDS: -5.61 Total: -10.18 kcal Atomic # 6 Polarization: 5.99 SS G_CDS: -1.83 Total: 4.16 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.44 Total: -0.35 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -0.37 Total: -3.18 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.07 Total: -0.45 kcal Atomic # 14 Polarization: -5.08 SS G_CDS: -6.16 Total: -11.24 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -6.89 -8.87 -15.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15733048_12360598.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.961 kcal (2) G-P(sol) polarization free energy of solvation -6.894 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.873 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.767 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds