Wall clock time and date at job start Sun Mar 7 2021 04:59:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.47113 * 2 1 4 4 H 1.48502 * 109.46889 * 300.00295 * 3 2 1 5 5 H 1.48496 * 109.47105 * 59.99958 * 3 2 1 6 6 H 1.48496 * 109.47327 * 180.02562 * 3 2 1 7 7 C 1.50697 * 109.47561 * 119.99884 * 2 1 3 8 8 C 1.38247 * 119.94588 * 65.01780 * 7 2 1 9 9 C 1.38166 * 120.05881 * 179.72316 * 8 7 2 10 10 N 1.48001 * 120.03005 * 180.25798 * 9 8 7 11 11 O 1.21805 * 119.99609 * 0.23515 * 10 9 8 12 12 O 1.21795 * 120.00179 * 180.23198 * 10 9 8 13 13 C 1.38714 * 119.93822 * 0.49398 * 9 8 7 14 14 O 1.35903 * 120.04853 * 179.78901 * 13 9 8 15 15 C 1.42906 * 116.99522 * 179.72437 * 14 13 9 16 16 C 1.50706 * 109.46702 * 179.97438 * 15 14 13 17 17 O 1.21279 * 120.00072 * 359.97438 * 16 15 14 18 18 N 1.34777 * 119.99762 * 179.97438 * 16 15 14 19 19 C 1.46403 * 118.75163 * 359.73648 * 18 16 15 20 20 C 1.53915 * 109.06374 * 253.44369 * 19 18 16 21 21 Si 1.85195 * 107.12498 * 308.57566 * 20 19 18 22 22 C 1.87456 * 111.52308 * 168.31424 * 21 20 19 23 23 C 1.55682 * 100.84923 * 114.79709 * 22 21 20 24 24 C 1.53786 * 111.39582 * 27.99620 * 23 22 21 25 25 C 1.56393 * 109.77380 * 312.17481 * 24 23 22 26 26 C 1.85191 * 110.14385 * 43.93713 * 21 20 19 27 27 C 1.46393 * 118.75699 * 179.97438 * 18 16 15 28 28 C 1.38744 * 119.89149 * 359.50934 * 13 9 8 29 29 C 1.38121 * 119.94701 * 0.25890 * 28 13 9 30 30 H 0.96697 * 114.00183 * 59.99889 * 1 2 3 31 31 H 1.08998 * 109.47150 * 240.00043 * 2 1 3 32 32 H 1.08006 * 119.96983 * 359.97438 * 8 7 2 33 33 H 1.09000 * 109.46890 * 59.99975 * 15 14 13 34 34 H 1.09000 * 109.47141 * 299.99618 * 15 14 13 35 35 H 1.08990 * 109.59153 * 13.19587 * 19 18 16 36 36 H 1.09011 * 109.58426 * 133.62298 * 19 18 16 37 37 H 1.08998 * 110.00404 * 189.12326 * 20 19 18 38 38 H 1.09005 * 109.83739 * 67.93599 * 20 19 18 39 39 H 1.09001 * 111.14546 * 232.69814 * 22 21 20 40 40 H 1.09004 * 111.14563 * 356.90495 * 22 21 20 41 41 H 1.09000 * 109.10510 * 267.49000 * 23 22 21 42 42 H 1.09003 * 109.10794 * 148.50983 * 23 22 21 43 43 H 1.08995 * 109.41950 * 192.07706 * 24 23 22 44 44 H 1.08996 * 109.41623 * 72.26989 * 24 23 22 45 45 H 1.08996 * 111.49368 * 281.94464 * 25 24 23 46 46 H 1.09003 * 111.49053 * 156.82640 * 25 24 23 47 47 H 1.08997 * 109.92808 * 196.56355 * 26 21 20 48 48 H 1.09003 * 109.92632 * 75.36143 * 26 21 20 49 49 H 1.08995 * 109.59532 * 226.37714 * 27 18 16 50 50 H 1.09002 * 109.58582 * 346.80561 * 27 18 16 51 51 H 1.08002 * 120.02699 * 180.27111 * 28 13 9 52 52 H 1.08001 * 119.97900 * 180.02562 * 29 28 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 1.5549 2.4565 -1.2125 5 1 1.5550 2.4565 1.2125 6 1 3.5349 1.7566 -0.0006 7 6 1.9314 -0.7104 1.2304 8 6 1.6845 -2.0603 1.3971 9 6 2.1490 -2.7152 2.5215 10 7 1.8893 -4.1617 2.6965 11 8 1.2694 -4.7762 1.8469 12 8 2.2953 -4.7375 3.6900 13 6 2.8548 -2.0146 3.4886 14 8 3.3090 -2.6556 4.5976 15 6 4.0333 -1.8725 5.5485 16 6 4.4534 -2.7459 6.7026 17 8 4.1609 -3.9228 6.7102 18 7 5.1542 -2.2190 7.7262 19 6 5.4975 -0.7963 7.6860 20 6 6.9988 -0.6499 7.3798 21 14 7.9080 -1.7255 8.5823 22 6 9.7104 -1.9195 8.1051 23 6 10.4083 -1.2061 9.2999 24 6 9.5562 -1.2878 10.5775 25 6 8.0790 -0.8884 10.2546 26 6 7.0648 -3.3674 8.7335 27 6 5.5478 -3.0920 8.8334 28 6 3.1012 -0.6598 3.3191 29 6 2.6389 -0.0108 2.1909 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5138 -0.8900 32 1 1.1315 -2.6045 0.6456 33 1 3.3973 -1.0670 5.9155 34 1 4.9176 -1.4490 5.0722 35 1 4.9188 -0.3026 6.9055 36 1 5.2773 -0.3399 8.6512 37 1 7.3053 0.3886 7.5049 38 1 7.2021 -0.9780 6.3604 39 1 9.9931 -2.9711 8.0556 40 1 9.9250 -1.4121 7.1645 41 1 10.5695 -0.1586 9.0451 42 1 11.3731 -1.6790 9.4837 43 1 9.9603 -0.6070 11.3267 44 1 9.5800 -2.3065 10.9643 45 1 7.9662 0.1927 10.1734 46 1 7.3841 -1.3060 10.9832 47 1 7.4090 -3.8805 9.6314 48 1 7.2749 -3.9753 7.8534 49 1 5.3269 -2.6019 9.7816 50 1 5.0003 -4.0324 8.7697 51 1 3.6543 -0.1132 4.0685 52 1 2.8308 1.0437 2.0582 RHF calculation, no. of doubly occupied orbitals= 71 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15733048_4549638.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:08 Heat of formation + Delta-G solvation = -102.030712 kcal Electronic energy + Delta-G solvation = -35235.841746 eV Core-core repulsion = 30521.093442 eV Total energy + Delta-G solvation = -4714.748304 eV No. of doubly occupied orbitals = 71 Molecular weight (most abundant/longest-lived isotopes) = 394.161 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.97570 -41.80844 -40.96799 -39.48138 -37.64564 -37.32629 -37.07151 -36.31679 -33.59830 -33.00192 -32.40017 -31.10754 -29.89094 -29.36368 -27.55758 -26.67833 -25.18157 -24.51416 -24.27283 -23.43282 -22.63523 -21.20754 -20.42187 -20.40078 -19.46102 -19.07335 -18.73130 -18.33855 -18.23903 -17.73678 -17.64656 -16.94677 -16.63036 -16.26563 -16.14852 -16.08558 -15.81394 -15.73536 -15.30950 -15.04921 -14.85344 -14.61234 -14.49473 -14.40302 -14.14646 -13.99763 -13.72861 -13.69251 -13.55832 -13.17867 -12.87236 -12.84260 -12.71319 -12.53322 -12.46867 -12.31001 -12.29650 -12.15511 -12.13001 -12.05469 -11.76346 -11.68952 -11.52200 -10.97075 -10.87403 -10.65493 -10.64422 -10.57067 -10.46581 -9.86747 -9.83837 -1.07987 -0.32530 0.42946 0.56926 0.87201 1.10683 1.17633 1.24074 1.39914 1.52969 1.56503 1.63910 1.66792 1.96397 2.05558 2.42421 2.92689 2.99068 3.13541 3.24155 3.45805 3.55010 3.57808 3.62659 3.75347 3.77919 3.83082 3.96010 3.98349 4.06083 4.11605 4.16840 4.19514 4.21655 4.27061 4.32201 4.46267 4.46732 4.49632 4.51836 4.66151 4.73976 4.84113 4.91372 4.95367 4.96689 4.98315 5.04334 5.20216 5.22441 5.35059 5.35589 5.37366 5.50448 5.75371 6.07078 6.34127 6.98991 7.00491 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.080 4.080 3 Si 0.943 3.057 4 H -0.248 1.248 5 H -0.245 1.245 6 H -0.246 1.246 7 C -0.112 4.112 8 C 0.013 3.987 9 C -0.076 4.076 10 N 0.029 4.971 11 O -0.177 6.177 12 O -0.118 6.118 13 C 0.200 3.800 14 O -0.254 6.254 15 C 0.029 3.971 16 C 0.513 3.487 17 O -0.494 6.494 18 N -0.613 5.613 19 C 0.112 3.888 20 C -0.435 4.435 21 Si 0.999 3.001 22 C -0.407 4.407 23 C -0.119 4.119 24 C -0.122 4.122 25 C -0.404 4.404 26 C -0.430 4.430 27 C 0.122 3.878 28 C -0.209 4.209 29 C -0.030 4.030 30 H 0.386 0.614 31 H 0.084 0.916 32 H 0.165 0.835 33 H 0.102 0.898 34 H 0.102 0.898 35 H 0.083 0.917 36 H 0.086 0.914 37 H 0.095 0.905 38 H 0.082 0.918 39 H 0.078 0.922 40 H 0.077 0.923 41 H 0.061 0.939 42 H 0.063 0.937 43 H 0.066 0.934 44 H 0.064 0.936 45 H 0.079 0.921 46 H 0.079 0.921 47 H 0.091 0.909 48 H 0.083 0.917 49 H 0.079 0.921 50 H 0.100 0.900 51 H 0.156 0.844 52 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.812 10.742 -0.068 11.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.190 4.190 3 Si 0.765 3.235 4 H -0.172 1.172 5 H -0.168 1.168 6 H -0.169 1.169 7 C -0.113 4.113 8 C -0.006 4.006 9 C -0.160 4.160 10 N 0.549 4.451 11 O -0.386 6.386 12 O -0.342 6.342 13 C 0.150 3.850 14 O -0.163 6.163 15 C -0.050 4.050 16 C 0.298 3.702 17 O -0.366 6.366 18 N -0.350 5.350 19 C -0.011 4.011 20 C -0.521 4.521 21 Si 1.192 2.808 22 C -0.493 4.493 23 C -0.156 4.156 24 C -0.159 4.159 25 C -0.490 4.490 26 C -0.517 4.517 27 C 0.001 3.999 28 C -0.228 4.228 29 C -0.048 4.048 30 H 0.234 0.766 31 H 0.102 0.898 32 H 0.182 0.818 33 H 0.119 0.881 34 H 0.120 0.880 35 H 0.101 0.899 36 H 0.105 0.895 37 H 0.113 0.887 38 H 0.101 0.899 39 H 0.096 0.904 40 H 0.096 0.904 41 H 0.080 0.920 42 H 0.081 0.919 43 H 0.084 0.916 44 H 0.083 0.917 45 H 0.097 0.903 46 H 0.098 0.902 47 H 0.109 0.891 48 H 0.101 0.899 49 H 0.098 0.902 50 H 0.118 0.882 51 H 0.173 0.827 52 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 4.081 11.080 0.420 11.815 hybrid contribution -0.007 -0.150 -0.424 0.450 sum 4.074 10.930 -0.004 11.664 Atomic orbital electron populations 1.86509 1.16701 1.81893 1.49928 1.24695 0.86252 1.10810 0.97235 0.85785 0.80743 0.74867 0.82137 1.17187 1.16796 1.16945 1.19149 1.01982 0.92761 0.97443 1.20804 0.92070 0.93867 0.93851 1.20554 1.12921 0.82454 1.00075 1.43315 0.98955 1.02417 1.00374 1.94548 1.39772 1.66227 1.38025 1.94698 1.51820 1.69183 1.18498 1.18676 0.89899 0.90822 0.85575 1.86505 1.66733 1.35639 1.27409 1.22872 0.97788 0.94476 0.89815 1.19874 0.78956 0.88327 0.83029 1.90846 1.52866 1.15698 1.77189 1.48012 1.55345 1.10294 1.21339 1.21425 0.95762 0.80329 1.03559 1.26599 1.02402 1.11156 1.11960 0.79558 0.66855 0.66979 0.67378 1.26492 1.19137 1.03210 1.00508 1.21844 0.99370 1.00666 0.93751 1.22022 0.94311 1.01744 0.97862 1.26663 0.98830 1.06461 1.17062 1.26674 1.01747 1.17301 1.05946 1.21358 0.95054 0.95774 0.87726 1.21206 1.07773 0.92133 1.01666 1.21239 0.92146 1.00186 0.91238 0.76620 0.89782 0.81753 0.88074 0.88047 0.89890 0.89532 0.88672 0.89950 0.90353 0.90374 0.91996 0.91853 0.91552 0.91749 0.90265 0.90244 0.89051 0.89859 0.90232 0.88211 0.82679 0.83972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.91 12.81 -35.23 -0.45 0.46 16 2 C -0.08 0.21 2.79 36.00 0.10 0.31 16 3 Si 0.94 -3.16 25.13 -169.99 -4.27 -7.43 16 4 H -0.25 0.69 7.11 56.52 0.40 1.09 16 5 H -0.24 0.59 7.04 56.52 0.40 0.99 16 6 H -0.25 0.77 7.11 56.52 0.40 1.17 16 7 C -0.11 0.08 5.39 -104.60 -0.56 -0.48 16 8 C 0.01 0.02 9.19 -39.60 -0.36 -0.35 16 9 C -0.08 -0.27 6.87 -79.81 -0.55 -0.82 16 10 N 0.03 0.21 4.45 34.03 0.15 0.36 16 11 O -0.18 -1.33 18.45 -29.46 -0.54 -1.88 16 12 O -0.12 -1.07 17.24 -36.49 -0.63 -1.70 16 13 C 0.20 0.34 6.67 -39.22 -0.26 0.08 16 14 O -0.25 -0.79 7.68 -49.79 -0.38 -1.17 16 15 C 0.03 -0.03 3.52 36.01 0.13 0.09 16 16 C 0.51 0.85 7.71 -10.98 -0.08 0.76 16 17 O -0.49 -3.37 15.76 -14.35 -0.23 -3.59 16 18 N -0.61 0.82 2.56 -172.34 -0.44 0.38 16 19 C 0.11 -0.51 5.75 -3.62 -0.02 -0.53 16 20 C -0.43 2.03 5.19 37.63 0.20 2.22 16 21 Si 1.00 -3.71 10.74 -169.99 -1.83 -5.53 16 22 C -0.41 0.80 5.84 38.59 0.23 1.03 16 23 C -0.12 0.18 6.10 -24.89 -0.15 0.02 16 24 C -0.12 0.21 5.97 -24.50 -0.15 0.07 16 25 C -0.40 1.21 5.95 38.98 0.23 1.44 16 26 C -0.43 0.78 5.21 37.95 0.20 0.98 16 27 C 0.12 -0.13 5.93 -3.31 -0.02 -0.15 16 28 C -0.21 0.41 9.04 -39.44 -0.36 0.05 16 29 C -0.03 0.06 8.66 -39.60 -0.34 -0.28 16 30 H 0.39 -2.31 8.74 45.56 0.40 -1.91 16 31 H 0.08 -0.37 7.96 -51.93 -0.41 -0.78 16 32 H 0.16 0.12 7.61 -52.48 -0.40 -0.28 16 33 H 0.10 -0.45 7.02 -51.93 -0.36 -0.81 16 34 H 0.10 -0.44 7.48 -51.93 -0.39 -0.83 16 35 H 0.08 -0.54 5.75 -51.93 -0.30 -0.84 16 36 H 0.09 -0.50 8.08 -51.92 -0.42 -0.92 16 37 H 0.09 -0.54 7.97 -51.93 -0.41 -0.95 16 38 H 0.08 -0.36 7.97 -51.93 -0.41 -0.78 16 39 H 0.08 -0.11 8.03 -51.93 -0.42 -0.53 16 40 H 0.08 -0.17 8.03 -51.93 -0.42 -0.58 16 41 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 43 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 45 H 0.08 -0.26 8.04 -51.93 -0.42 -0.68 16 46 H 0.08 -0.25 8.04 -51.93 -0.42 -0.67 16 47 H 0.09 -0.22 7.97 -51.93 -0.41 -0.63 16 48 H 0.08 -0.02 7.97 -51.93 -0.41 -0.44 16 49 H 0.08 -0.25 8.08 -51.93 -0.42 -0.67 16 50 H 0.10 0.14 6.91 -51.93 -0.36 -0.22 16 51 H 0.16 -0.88 6.30 -52.49 -0.33 -1.21 16 52 H 0.14 -0.62 4.86 -52.49 -0.25 -0.87 16 LS Contribution 417.22 15.07 6.29 6.29 Total: 0.00 -11.62 417.22 -11.18 -22.80 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -7.06 Total: -13.44 kcal Atomic # 6 Polarization: 6.24 SS G_CDS: -1.78 Total: 4.45 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -0.29 Total: 0.74 kcal Atomic # 8 Polarization: -5.65 SS G_CDS: -2.23 Total: -7.88 kcal Atomic # 14 Polarization: -6.86 SS G_CDS: -6.10 Total: -12.96 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -11.62 -11.18 -22.80 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15733048_4549638.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.229 kcal (2) G-P(sol) polarization free energy of solvation -11.623 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.852 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.801 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.031 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds